Tetra-nucleotide Coding Repeats of Chlamydia trachomatis D/SotonD5 plasmid pSotonD5
Total Repeats: 21
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020958 | ATTG | 2 | 8 | 631 | 638 | 25 % | 50 % | 25 % | 0 % | 478455824 |
2 | NC_020958 | TCTG | 2 | 8 | 1469 | 1476 | 0 % | 50 % | 25 % | 25 % | 478455825 |
3 | NC_020958 | GAAA | 2 | 8 | 1495 | 1502 | 75 % | 0 % | 25 % | 0 % | 478455825 |
4 | NC_020958 | AGGA | 2 | 8 | 1628 | 1635 | 50 % | 0 % | 50 % | 0 % | 478455825 |
5 | NC_020958 | TGTT | 2 | 8 | 1961 | 1968 | 0 % | 75 % | 25 % | 0 % | 478455825 |
6 | NC_020958 | TTCT | 2 | 8 | 2807 | 2814 | 0 % | 75 % | 0 % | 25 % | 478455826 |
7 | NC_020958 | GTTT | 2 | 8 | 3333 | 3340 | 0 % | 75 % | 25 % | 0 % | 478455826 |
8 | NC_020958 | AGGA | 2 | 8 | 3453 | 3460 | 50 % | 0 % | 50 % | 0 % | 478455826 |
9 | NC_020958 | TTTC | 2 | 8 | 3713 | 3720 | 0 % | 75 % | 0 % | 25 % | 478455827 |
10 | NC_020958 | GGAT | 2 | 8 | 3833 | 3840 | 25 % | 25 % | 50 % | 0 % | 478455827 |
11 | NC_020958 | TAAA | 2 | 8 | 4557 | 4564 | 75 % | 25 % | 0 % | 0 % | 478455827 |
12 | NC_020958 | ATTA | 2 | 8 | 4619 | 4626 | 50 % | 50 % | 0 % | 0 % | 478455827 |
13 | NC_020958 | CAAA | 2 | 8 | 5469 | 5476 | 75 % | 0 % | 0 % | 25 % | 478455828 |
14 | NC_020958 | ATCA | 2 | 8 | 6101 | 6108 | 50 % | 25 % | 0 % | 25 % | 478455830 |
15 | NC_020958 | AATT | 2 | 8 | 6316 | 6323 | 50 % | 50 % | 0 % | 0 % | 478455830 |
16 | NC_020958 | TCGG | 2 | 8 | 6387 | 6394 | 0 % | 25 % | 50 % | 25 % | 478455830 |
17 | NC_020958 | CTTC | 2 | 8 | 6758 | 6765 | 0 % | 50 % | 0 % | 50 % | 478455831 |
18 | NC_020958 | AGTT | 2 | 8 | 7017 | 7024 | 25 % | 50 % | 25 % | 0 % | 478455831 |
19 | NC_020958 | CCAA | 2 | 8 | 7086 | 7093 | 50 % | 0 % | 0 % | 50 % | 478455831 |
20 | NC_020958 | CTTC | 2 | 8 | 7241 | 7248 | 0 % | 50 % | 0 % | 50 % | 478455831 |
21 | NC_020958 | GATA | 2 | 8 | 7276 | 7283 | 50 % | 25 % | 25 % | 0 % | 478455831 |