MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Repeats of Chlamydia trachomatis L2b/Ams3 plasmid pAms3

Total Repeats: 96

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020949	TGG	2	6	12	17	0 %	33.33 %	66.67 %	0 %	Non-Coding
2	NC_020949	TGG	2	6	34	39	0 %	33.33 %	66.67 %	0 %	Non-Coding
3	NC_020949	TGG	2	6	56	61	0 %	33.33 %	66.67 %	0 %	Non-Coding
4	NC_020949	TGG	2	6	78	83	0 %	33.33 %	66.67 %	0 %	Non-Coding
5	NC_020949	TTG	2	6	106	111	0 %	66.67 %	33.33 %	0 %	Non-Coding
6	NC_020949	GTT	2	6	194	199	0 %	66.67 %	33.33 %	0 %	478464853
7	NC_020949	GGA	2	6	782	787	33.33 %	0 %	66.67 %	0 %	478464853
8	NC_020949	AAC	2	6	851	856	66.67 %	0 %	0 %	33.33 %	478464853
9	NC_020949	TCT	2	6	1147	1152	0 %	66.67 %	0 %	33.33 %	478464854
10	NC_020949	TCT	2	6	1164	1169	0 %	66.67 %	0 %	33.33 %	478464854
11	NC_020949	ATC	2	6	1194	1199	33.33 %	33.33 %	0 %	33.33 %	478464854
12	NC_020949	CCA	2	6	1363	1368	33.33 %	0 %	0 %	66.67 %	478464854
13	NC_020949	TAA	2	6	1456	1461	66.67 %	33.33 %	0 %	0 %	478464854
14	NC_020949	TTG	2	6	1511	1516	0 %	66.67 %	33.33 %	0 %	478464854
15	NC_020949	CCT	2	6	1566	1571	0 %	33.33 %	0 %	66.67 %	478464854
16	NC_020949	TGC	2	6	1784	1789	0 %	33.33 %	33.33 %	33.33 %	478464854
17	NC_020949	AAG	2	6	1816	1821	66.67 %	0 %	33.33 %	0 %	478464854
18	NC_020949	ATA	2	6	1989	1994	66.67 %	33.33 %	0 %	0 %	478464854
19	NC_020949	TGC	2	6	2097	2102	0 %	33.33 %	33.33 %	33.33 %	478464854
20	NC_020949	AAT	2	6	2173	2178	66.67 %	33.33 %	0 %	0 %	Non-Coding
21	NC_020949	GTT	2	6	2182	2187	0 %	66.67 %	33.33 %	0 %	Non-Coding
22	NC_020949	GTT	2	6	2274	2279	0 %	66.67 %	33.33 %	0 %	478464855
23	NC_020949	TCA	2	6	2355	2360	33.33 %	33.33 %	0 %	33.33 %	478464855
24	NC_020949	GCG	2	6	2442	2447	0 %	0 %	66.67 %	33.33 %	478464855
25	NC_020949	ATG	2	6	2492	2497	33.33 %	33.33 %	33.33 %	0 %	478464855
26	NC_020949	GAT	2	6	2545	2550	33.33 %	33.33 %	33.33 %	0 %	478464855
27	NC_020949	GAA	2	6	2569	2574	66.67 %	0 %	33.33 %	0 %	478464855
28	NC_020949	TGA	2	6	2847	2852	33.33 %	33.33 %	33.33 %	0 %	478464855
29	NC_020949	AGC	2	6	2892	2897	33.33 %	0 %	33.33 %	33.33 %	478464855
30	NC_020949	TTG	2	6	3008	3013	0 %	66.67 %	33.33 %	0 %	478464855
31	NC_020949	ATT	2	6	3019	3024	33.33 %	66.67 %	0 %	0 %	478464855
32	NC_020949	AGA	2	6	3078	3083	66.67 %	0 %	33.33 %	0 %	478464855
33	NC_020949	ATT	2	6	3084	3089	33.33 %	66.67 %	0 %	0 %	478464855
34	NC_020949	AGA	2	6	3096	3101	66.67 %	0 %	33.33 %	0 %	478464855
35	NC_020949	AGA	2	6	3198	3203	66.67 %	0 %	33.33 %	0 %	478464855
36	NC_020949	TCT	2	6	3466	3471	0 %	66.67 %	0 %	33.33 %	478464855
37	NC_020949	TCA	2	6	3598	3603	33.33 %	33.33 %	0 %	33.33 %	478464856
38	NC_020949	GAA	2	6	3637	3642	66.67 %	0 %	33.33 %	0 %	478464856
39	NC_020949	AGC	2	6	3740	3745	33.33 %	0 %	33.33 %	33.33 %	478464856
40	NC_020949	GTT	2	6	3795	3800	0 %	66.67 %	33.33 %	0 %	478464856
41	NC_020949	AAG	2	6	3934	3939	66.67 %	0 %	33.33 %	0 %	478464856
42	NC_020949	TAG	2	6	4030	4035	33.33 %	33.33 %	33.33 %	0 %	478464856
43	NC_020949	GAA	2	6	4098	4103	66.67 %	0 %	33.33 %	0 %	478464856
44	NC_020949	CAG	2	6	4303	4308	33.33 %	0 %	33.33 %	33.33 %	478464856
45	NC_020949	AGA	2	6	4497	4502	66.67 %	0 %	33.33 %	0 %	478464856
46	NC_020949	TTC	2	6	4523	4528	0 %	66.67 %	0 %	33.33 %	478464856
47	NC_020949	GAA	2	6	4575	4580	66.67 %	0 %	33.33 %	0 %	478464856
48	NC_020949	ATA	2	6	4751	4756	66.67 %	33.33 %	0 %	0 %	478464857
49	NC_020949	AAT	2	6	4797	4802	66.67 %	33.33 %	0 %	0 %	478464857
50	NC_020949	ACA	2	6	4810	4815	66.67 %	0 %	0 %	33.33 %	478464857
51	NC_020949	AAT	2	6	4873	4878	66.67 %	33.33 %	0 %	0 %	478464857
52	NC_020949	TGG	2	6	4965	4970	0 %	33.33 %	66.67 %	0 %	478464857
53	NC_020949	TTG	2	6	4985	4990	0 %	66.67 %	33.33 %	0 %	478464857
54	NC_020949	TTG	2	6	5044	5049	0 %	66.67 %	33.33 %	0 %	478464857
55	NC_020949	AAC	2	6	5059	5064	66.67 %	0 %	0 %	33.33 %	478464857
56	NC_020949	TAA	2	6	5076	5081	66.67 %	33.33 %	0 %	0 %	478464857
57	NC_020949	AGG	2	6	5130	5135	33.33 %	0 %	66.67 %	0 %	478464857
58	NC_020949	CAG	2	6	5195	5200	33.33 %	0 %	33.33 %	33.33 %	478464857
59	NC_020949	ATT	2	6	5203	5208	33.33 %	66.67 %	0 %	0 %	478464857
60	NC_020949	GGC	2	6	5224	5229	0 %	0 %	66.67 %	33.33 %	478464857
61	NC_020949	GTT	2	6	5230	5235	0 %	66.67 %	33.33 %	0 %	478464857
62	NC_020949	TCA	2	6	5290	5295	33.33 %	33.33 %	0 %	33.33 %	478464857
63	NC_020949	ATT	2	6	5329	5334	33.33 %	66.67 %	0 %	0 %	478464857
64	NC_020949	TTA	2	6	5594	5599	33.33 %	66.67 %	0 %	0 %	478464858
65	NC_020949	CAA	2	6	5734	5739	66.67 %	0 %	0 %	33.33 %	478464858
66	NC_020949	ATT	2	6	5757	5762	33.33 %	66.67 %	0 %	0 %	478464858
67	NC_020949	GGA	2	6	5929	5934	33.33 %	0 %	66.67 %	0 %	478464859
68	NC_020949	ACA	2	6	5944	5949	66.67 %	0 %	0 %	33.33 %	478464859
69	NC_020949	TCT	2	6	6034	6039	0 %	66.67 %	0 %	33.33 %	478464859
70	NC_020949	CAT	2	6	6158	6163	33.33 %	33.33 %	0 %	33.33 %	478464859
71	NC_020949	AAC	2	6	6211	6216	66.67 %	0 %	0 %	33.33 %	478464859
72	NC_020949	ATA	2	6	6265	6270	66.67 %	33.33 %	0 %	0 %	478464859
73	NC_020949	AAG	2	6	6302	6307	66.67 %	0 %	33.33 %	0 %	478464859
74	NC_020949	TTG	2	6	6311	6316	0 %	66.67 %	33.33 %	0 %	478464859
75	NC_020949	GAA	3	9	6412	6420	66.67 %	0 %	33.33 %	0 %	478464859
76	NC_020949	GAT	2	6	6451	6456	33.33 %	33.33 %	33.33 %	0 %	478464859
77	NC_020949	CAA	2	6	6521	6526	66.67 %	0 %	0 %	33.33 %	478464859
78	NC_020949	TCG	2	6	6531	6536	0 %	33.33 %	33.33 %	33.33 %	478464859
79	NC_020949	TCT	2	6	6558	6563	0 %	66.67 %	0 %	33.33 %	478464859
80	NC_020949	AGA	2	6	6567	6572	66.67 %	0 %	33.33 %	0 %	478464859
81	NC_020949	AGA	2	6	6609	6614	66.67 %	0 %	33.33 %	0 %	478464859
82	NC_020949	CTT	2	6	6745	6750	0 %	66.67 %	0 %	33.33 %	478464860
83	NC_020949	AAG	2	6	6759	6764	66.67 %	0 %	33.33 %	0 %	478464860
84	NC_020949	ATT	2	6	6830	6835	33.33 %	66.67 %	0 %	0 %	478464860
85	NC_020949	GAA	2	6	6864	6869	66.67 %	0 %	33.33 %	0 %	478464860
86	NC_020949	AAG	2	6	6877	6882	66.67 %	0 %	33.33 %	0 %	478464860
87	NC_020949	CTT	2	6	6942	6947	0 %	66.67 %	0 %	33.33 %	478464860
88	NC_020949	CAA	2	6	7003	7008	66.67 %	0 %	0 %	33.33 %	478464860
89	NC_020949	TCT	2	6	7047	7052	0 %	66.67 %	0 %	33.33 %	478464860
90	NC_020949	AGA	2	6	7306	7311	66.67 %	0 %	33.33 %	0 %	478464860
91	NC_020949	CAT	2	6	7349	7354	33.33 %	33.33 %	0 %	33.33 %	478464860
92	NC_020949	TCC	2	6	7374	7379	0 %	33.33 %	0 %	66.67 %	478464860
93	NC_020949	TCT	2	6	7391	7396	0 %	66.67 %	0 %	33.33 %	478464860
94	NC_020949	ACA	2	6	7397	7402	66.67 %	0 %	0 %	33.33 %	478464860
95	NC_020949	TCC	2	6	7434	7439	0 %	33.33 %	0 %	66.67 %	Non-Coding
96	NC_020949	TAT	2	6	7459	7464	33.33 %	66.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.