Hexa-nucleotide Non-Coding Repeats of Chlamydia trachomatis D/SotonD5 complete genome
Total Repeats: 40
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020943 | CAAAAA | 2 | 12 | 6852 | 6863 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
2 | NC_020943 | AAAAAT | 2 | 12 | 61197 | 61208 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
3 | NC_020943 | ATCTAG | 2 | 12 | 76926 | 76937 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
4 | NC_020943 | TTTTAG | 2 | 12 | 116197 | 116208 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
5 | NC_020943 | TAAAAA | 2 | 12 | 120793 | 120804 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
6 | NC_020943 | AGAAAA | 2 | 12 | 182416 | 182427 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
7 | NC_020943 | TATGAA | 2 | 12 | 195229 | 195240 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
8 | NC_020943 | TTTTAC | 2 | 12 | 221243 | 221254 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
9 | NC_020943 | AACCCT | 2 | 12 | 254960 | 254971 | 33.33 % | 16.67 % | 0 % | 50 % | Non-Coding |
10 | NC_020943 | ATTTTT | 2 | 12 | 255755 | 255766 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
11 | NC_020943 | AGGAGA | 2 | 12 | 270857 | 270868 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
12 | NC_020943 | ATATTA | 2 | 12 | 279755 | 279766 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
13 | NC_020943 | AAAAAG | 2 | 12 | 323916 | 323927 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
14 | NC_020943 | AGAATA | 2 | 12 | 361409 | 361420 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
15 | NC_020943 | TAACTA | 2 | 12 | 502976 | 502987 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
16 | NC_020943 | AAGAAA | 2 | 12 | 502989 | 503000 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
17 | NC_020943 | AGAATA | 2 | 12 | 508964 | 508975 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
18 | NC_020943 | AACTAA | 2 | 12 | 514697 | 514708 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
19 | NC_020943 | AAATAA | 2 | 12 | 531214 | 531225 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
20 | NC_020943 | AGCCAC | 2 | 12 | 531558 | 531569 | 33.33 % | 0 % | 16.67 % | 50 % | Non-Coding |
21 | NC_020943 | TCCCTC | 2 | 12 | 548545 | 548556 | 0 % | 33.33 % | 0 % | 66.67 % | Non-Coding |
22 | NC_020943 | AAAAAT | 2 | 12 | 566518 | 566529 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
23 | NC_020943 | TAGGGG | 2 | 12 | 605685 | 605696 | 16.67 % | 16.67 % | 66.67 % | 0 % | Non-Coding |
24 | NC_020943 | TCTTTT | 2 | 12 | 617680 | 617691 | 0 % | 83.33 % | 0 % | 16.67 % | Non-Coding |
25 | NC_020943 | TTATTT | 2 | 12 | 648889 | 648900 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
26 | NC_020943 | TCTGCA | 3 | 18 | 745345 | 745362 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
27 | NC_020943 | TATTTT | 2 | 12 | 754827 | 754838 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
28 | NC_020943 | GAGAAA | 2 | 12 | 802275 | 802286 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
29 | NC_020943 | TTTTCT | 2 | 12 | 804733 | 804744 | 0 % | 83.33 % | 0 % | 16.67 % | Non-Coding |
30 | NC_020943 | ATTTTT | 2 | 12 | 808512 | 808523 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
31 | NC_020943 | TTTTTA | 2 | 12 | 834950 | 834961 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
32 | NC_020943 | TAAGGA | 2 | 12 | 855904 | 855915 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
33 | NC_020943 | CCGGAG | 2 | 12 | 856822 | 856833 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
34 | NC_020943 | CCTCTA | 2 | 12 | 869967 | 869978 | 16.67 % | 33.33 % | 0 % | 50 % | Non-Coding |
35 | NC_020943 | TAAGGA | 2 | 12 | 877944 | 877955 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
36 | NC_020943 | CCGGAG | 2 | 12 | 878862 | 878873 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
37 | NC_020943 | GACGGC | 2 | 12 | 921291 | 921302 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
38 | NC_020943 | AAACAA | 2 | 12 | 922979 | 922990 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
39 | NC_020943 | ATTTTT | 2 | 12 | 1038474 | 1038485 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
40 | NC_020943 | TAAAAT | 2 | 12 | 1042097 | 1042108 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |