MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Chlamydia trachomatis L2b/Ams5 high quality draft genome sequence

Total Repeats: 36

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020936	CAAAAA	2	12	6849	6860	83.33 %	0 %	0 %	16.67 %	Non-Coding
2	NC_020936	AAAAAT	2	12	61513	61524	83.33 %	16.67 %	0 %	0 %	Non-Coding
3	NC_020936	ATCTAG	2	12	77224	77235	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
4	NC_020936	TTTTAG	2	12	116506	116517	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
5	NC_020936	TAAAAA	2	12	121178	121189	83.33 %	16.67 %	0 %	0 %	Non-Coding
6	NC_020936	AGAAAA	2	12	183381	183392	83.33 %	0 %	16.67 %	0 %	Non-Coding
7	NC_020936	TATGAA	3	18	192318	192335	50 %	33.33 %	16.67 %	0 %	Non-Coding
8	NC_020936	TTTTAC	2	12	217639	217650	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
9	NC_020936	TTTTTA	2	12	252171	252182	16.67 %	83.33 %	0 %	0 %	Non-Coding
10	NC_020936	AGGAGA	2	12	267271	267282	50 %	0 %	50 %	0 %	Non-Coding
11	NC_020936	ATATTA	2	12	276167	276178	50 %	50 %	0 %	0 %	Non-Coding
12	NC_020936	AAAAAG	2	12	320337	320348	83.33 %	0 %	16.67 %	0 %	Non-Coding
13	NC_020936	AGAATA	2	12	357817	357828	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
14	NC_020936	ACATCA	2	12	423279	423290	50 %	16.67 %	0 %	33.33 %	Non-Coding
15	NC_020936	TAACTA	2	12	499513	499524	50 %	33.33 %	0 %	16.67 %	Non-Coding
16	NC_020936	AAGAAA	2	12	499526	499537	83.33 %	0 %	16.67 %	0 %	Non-Coding
17	NC_020936	AGAATA	2	12	505501	505512	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
18	NC_020936	TCCCTC	2	12	545247	545258	0 %	33.33 %	0 %	66.67 %	Non-Coding
19	NC_020936	AAAAAT	2	12	563217	563228	83.33 %	16.67 %	0 %	0 %	Non-Coding
20	NC_020936	TAGGGG	2	12	602385	602396	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
21	NC_020936	TCTTTT	2	12	614379	614390	0 %	83.33 %	0 %	16.67 %	Non-Coding
22	NC_020936	TCTGCA	2	12	742026	742037	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
23	NC_020936	TATTTT	2	12	751503	751514	16.67 %	83.33 %	0 %	0 %	Non-Coding
24	NC_020936	GAGAAA	2	12	798973	798984	66.67 %	0 %	33.33 %	0 %	Non-Coding
25	NC_020936	TTTTCT	2	12	801431	801442	0 %	83.33 %	0 %	16.67 %	Non-Coding
26	NC_020936	ATTTTT	2	12	805210	805221	16.67 %	83.33 %	0 %	0 %	Non-Coding
27	NC_020936	TTTTTA	2	12	831690	831701	16.67 %	83.33 %	0 %	0 %	Non-Coding
28	NC_020936	TAAGGA	2	12	852697	852708	50 %	16.67 %	33.33 %	0 %	Non-Coding
29	NC_020936	CCGGAG	2	12	853615	853626	16.67 %	0 %	50 %	33.33 %	Non-Coding
30	NC_020936	CCTCTA	2	12	866760	866771	16.67 %	33.33 %	0 %	50 %	Non-Coding
31	NC_020936	TAAGGA	2	12	874741	874752	50 %	16.67 %	33.33 %	0 %	Non-Coding
32	NC_020936	CCGGAG	2	12	875659	875670	16.67 %	0 %	50 %	33.33 %	Non-Coding
33	NC_020936	GACGGC	2	12	918078	918089	16.67 %	0 %	50 %	33.33 %	Non-Coding
34	NC_020936	AAACAA	2	12	919766	919777	83.33 %	0 %	0 %	16.67 %	Non-Coding
35	NC_020936	AATTTT	2	12	1038793	1038804	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_020936	TAAAAT	2	12	1038805	1038816	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.