MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Chlamydia trachomatis L2b/Canada2 high quality draft genome sequence

Total Repeats: 37

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020932	CAAAAA	2	12	6849	6860	83.33 %	0 %	0 %	16.67 %	Non-Coding
2	NC_020932	AAAAAT	2	12	61384	61395	83.33 %	16.67 %	0 %	0 %	Non-Coding
3	NC_020932	ATCTAG	2	12	77095	77106	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
4	NC_020932	TTTTAG	2	12	116377	116388	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
5	NC_020932	TAAAAA	2	12	121049	121060	83.33 %	16.67 %	0 %	0 %	Non-Coding
6	NC_020932	AGAAAA	2	12	183252	183263	83.33 %	0 %	16.67 %	0 %	Non-Coding
7	NC_020932	TATGAA	3	18	192189	192206	50 %	33.33 %	16.67 %	0 %	Non-Coding
8	NC_020932	TTTTAC	2	12	217510	217521	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
9	NC_020932	TTTTTA	2	12	252042	252053	16.67 %	83.33 %	0 %	0 %	Non-Coding
10	NC_020932	AGGAGA	2	12	267142	267153	50 %	0 %	50 %	0 %	Non-Coding
11	NC_020932	ATATTA	2	12	276038	276049	50 %	50 %	0 %	0 %	Non-Coding
12	NC_020932	AAAAAG	2	12	320208	320219	83.33 %	0 %	16.67 %	0 %	Non-Coding
13	NC_020932	AGAATA	2	12	357688	357699	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
14	NC_020932	ACATCA	2	12	423150	423161	50 %	16.67 %	0 %	33.33 %	Non-Coding
15	NC_020932	TAACTA	2	12	499384	499395	50 %	33.33 %	0 %	16.67 %	Non-Coding
16	NC_020932	AAGAAA	2	12	499397	499408	83.33 %	0 %	16.67 %	0 %	Non-Coding
17	NC_020932	AGAATA	2	12	505372	505383	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
18	NC_020932	AACTAA	2	12	511104	511115	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
19	NC_020932	TCCCTC	2	12	545118	545129	0 %	33.33 %	0 %	66.67 %	Non-Coding
20	NC_020932	AAAAAT	2	12	563088	563099	83.33 %	16.67 %	0 %	0 %	Non-Coding
21	NC_020932	TAGGGG	2	12	602256	602267	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
22	NC_020932	TCTTTT	2	12	614250	614261	0 %	83.33 %	0 %	16.67 %	Non-Coding
23	NC_020932	TCTGCA	2	12	741897	741908	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
24	NC_020932	TATTTT	2	12	751374	751385	16.67 %	83.33 %	0 %	0 %	Non-Coding
25	NC_020932	GAGAAA	2	12	798844	798855	66.67 %	0 %	33.33 %	0 %	Non-Coding
26	NC_020932	TTTTCT	2	12	801302	801313	0 %	83.33 %	0 %	16.67 %	Non-Coding
27	NC_020932	ATTTTT	2	12	805081	805092	16.67 %	83.33 %	0 %	0 %	Non-Coding
28	NC_020932	TTTTTA	2	12	831561	831572	16.67 %	83.33 %	0 %	0 %	Non-Coding
29	NC_020932	TAAGGA	2	12	852568	852579	50 %	16.67 %	33.33 %	0 %	Non-Coding
30	NC_020932	CCGGAG	2	12	853486	853497	16.67 %	0 %	50 %	33.33 %	Non-Coding
31	NC_020932	CCTCTA	2	12	866631	866642	16.67 %	33.33 %	0 %	50 %	Non-Coding
32	NC_020932	TAAGGA	2	12	874612	874623	50 %	16.67 %	33.33 %	0 %	Non-Coding
33	NC_020932	CCGGAG	2	12	875530	875541	16.67 %	0 %	50 %	33.33 %	Non-Coding
34	NC_020932	GACGGC	2	12	917949	917960	16.67 %	0 %	50 %	33.33 %	Non-Coding
35	NC_020932	AAACAA	2	12	919637	919648	83.33 %	0 %	0 %	16.67 %	Non-Coding
36	NC_020932	AATTTT	2	12	1038691	1038702	33.33 %	66.67 %	0 %	0 %	Non-Coding
37	NC_020932	TAAAAT	2	12	1038703	1038714	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.