Hexa-nucleotide Non-Coding Repeats of Mannheimia haemolytica USDA-ARS-SAM-185
Total Repeats: 114
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020834 | CAAAAA | 2 | 12 | 18119 | 18130 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
2 | NC_020834 | CGAAAA | 2 | 12 | 23135 | 23146 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
3 | NC_020834 | TCGGCT | 2 | 12 | 58765 | 58776 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
4 | NC_020834 | ATAATT | 2 | 12 | 69651 | 69662 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
5 | NC_020834 | ATTTAA | 2 | 12 | 102974 | 102985 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
6 | NC_020834 | TGATTT | 2 | 12 | 141635 | 141646 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
7 | NC_020834 | TTAAAC | 2 | 12 | 203711 | 203722 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
8 | NC_020834 | AATATC | 2 | 12 | 231948 | 231959 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
9 | NC_020834 | TTTTAT | 2 | 12 | 238693 | 238704 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
10 | NC_020834 | TATTTA | 2 | 12 | 242707 | 242718 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
11 | NC_020834 | GCTTTT | 2 | 12 | 244989 | 245000 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
12 | NC_020834 | TAAGGC | 2 | 12 | 267694 | 267705 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
13 | NC_020834 | AAAAAT | 2 | 12 | 273331 | 273342 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
14 | NC_020834 | TTAAAA | 2 | 12 | 285967 | 285978 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
15 | NC_020834 | CACTAT | 2 | 12 | 300503 | 300514 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
16 | NC_020834 | TGAAAG | 2 | 12 | 330428 | 330439 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
17 | NC_020834 | TAAAAA | 2 | 12 | 333712 | 333723 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
18 | NC_020834 | CTATTG | 2 | 12 | 362864 | 362875 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
19 | NC_020834 | AATATT | 2 | 12 | 381149 | 381160 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
20 | NC_020834 | TATTTA | 2 | 12 | 390675 | 390686 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
21 | NC_020834 | AATTTG | 2 | 12 | 411351 | 411362 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
22 | NC_020834 | ATACAA | 2 | 12 | 413553 | 413564 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
23 | NC_020834 | CAAATA | 2 | 12 | 450408 | 450419 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
24 | NC_020834 | CCCTCT | 2 | 12 | 471934 | 471945 | 0 % | 33.33 % | 0 % | 66.67 % | Non-Coding |
25 | NC_020834 | AATTGA | 2 | 12 | 498560 | 498571 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
26 | NC_020834 | TAATGA | 2 | 12 | 498660 | 498671 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
27 | NC_020834 | TTAATT | 2 | 12 | 508542 | 508553 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
28 | NC_020834 | CGAAGG | 2 | 12 | 509330 | 509341 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
29 | NC_020834 | TGAAAT | 2 | 12 | 512645 | 512656 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
30 | NC_020834 | AAGCAA | 2 | 12 | 513864 | 513875 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
31 | NC_020834 | GGTAAA | 2 | 12 | 513954 | 513965 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
32 | NC_020834 | TGAGAA | 2 | 12 | 550135 | 550146 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
33 | NC_020834 | CACCAA | 2 | 12 | 563472 | 563483 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
34 | NC_020834 | AAATGA | 2 | 12 | 615047 | 615058 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
35 | NC_020834 | TTTATT | 2 | 12 | 654882 | 654893 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
36 | NC_020834 | TAGAAA | 2 | 12 | 659081 | 659092 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
37 | NC_020834 | AGCGGA | 2 | 12 | 684443 | 684454 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
38 | NC_020834 | ACAGTT | 2 | 12 | 684684 | 684695 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
39 | NC_020834 | TTTTTA | 2 | 12 | 720317 | 720328 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
40 | NC_020834 | TCAAAG | 2 | 12 | 737166 | 737177 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
41 | NC_020834 | TCCCTC | 2 | 12 | 818404 | 818415 | 0 % | 33.33 % | 0 % | 66.67 % | Non-Coding |
42 | NC_020834 | GGATAA | 2 | 12 | 851847 | 851858 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
43 | NC_020834 | AAACAT | 2 | 12 | 851888 | 851899 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
44 | NC_020834 | GGCAAA | 2 | 12 | 880606 | 880617 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
45 | NC_020834 | ACTGAA | 2 | 12 | 941740 | 941751 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
46 | NC_020834 | GATATA | 2 | 12 | 944632 | 944643 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
47 | NC_020834 | AAAATT | 2 | 12 | 974411 | 974422 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
48 | NC_020834 | TTTGTG | 2 | 12 | 1012238 | 1012249 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
49 | NC_020834 | GCGTTT | 2 | 12 | 1068277 | 1068288 | 0 % | 50 % | 33.33 % | 16.67 % | Non-Coding |
50 | NC_020834 | TGTGAT | 2 | 12 | 1219478 | 1219489 | 16.67 % | 50 % | 33.33 % | 0 % | Non-Coding |
51 | NC_020834 | TAATCT | 2 | 12 | 1274654 | 1274665 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
52 | NC_020834 | GATATA | 2 | 12 | 1274762 | 1274773 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
53 | NC_020834 | TAAAAA | 2 | 12 | 1293947 | 1293958 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
54 | NC_020834 | AAAAGT | 2 | 12 | 1315407 | 1315418 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
55 | NC_020834 | TTTTAT | 2 | 12 | 1344471 | 1344482 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
56 | NC_020834 | TATTAA | 2 | 12 | 1420298 | 1420309 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
57 | NC_020834 | AAAAAT | 2 | 12 | 1442906 | 1442917 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
58 | NC_020834 | TATTTT | 2 | 12 | 1442948 | 1442959 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
59 | NC_020834 | CATATA | 2 | 12 | 1465584 | 1465595 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
60 | NC_020834 | AAGCCT | 2 | 12 | 1526279 | 1526290 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
61 | NC_020834 | CTTTAA | 2 | 12 | 1527971 | 1527982 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
62 | NC_020834 | AAAAGT | 2 | 12 | 1587378 | 1587389 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
63 | NC_020834 | AAAAAT | 2 | 12 | 1646662 | 1646673 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
64 | NC_020834 | ATTTTT | 2 | 12 | 1672712 | 1672723 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
65 | NC_020834 | ATTTTC | 2 | 12 | 1673355 | 1673366 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
66 | NC_020834 | AAAATA | 2 | 12 | 1674136 | 1674147 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
67 | NC_020834 | AAAACA | 2 | 12 | 1674207 | 1674218 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
68 | NC_020834 | TTGATT | 2 | 12 | 1690185 | 1690196 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
69 | NC_020834 | AGCGTA | 2 | 12 | 1702195 | 1702206 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
70 | NC_020834 | AAATTT | 2 | 12 | 1769470 | 1769481 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
71 | NC_020834 | TTTTGC | 2 | 12 | 1839928 | 1839939 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
72 | NC_020834 | ATTTCA | 2 | 12 | 1841149 | 1841160 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
73 | NC_020834 | GCCTTC | 2 | 12 | 1844579 | 1844590 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
74 | NC_020834 | AATTAA | 2 | 12 | 1845368 | 1845379 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
75 | NC_020834 | TCTATT | 2 | 12 | 1890485 | 1890496 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
76 | NC_020834 | TTTTAT | 2 | 12 | 1894401 | 1894412 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
77 | NC_020834 | TTTTCG | 2 | 12 | 1922072 | 1922083 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
78 | NC_020834 | AGCCAT | 3 | 18 | 1943924 | 1943941 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | Non-Coding |
79 | NC_020834 | AACTCA | 2 | 12 | 1945502 | 1945513 | 50 % | 16.67 % | 0 % | 33.33 % | Non-Coding |
80 | NC_020834 | TTTTAT | 2 | 12 | 1971887 | 1971898 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
81 | NC_020834 | AATGCA | 2 | 12 | 1980215 | 1980226 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
82 | NC_020834 | CCTTTT | 2 | 12 | 1987405 | 1987416 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
83 | NC_020834 | GATAAA | 2 | 12 | 2047900 | 2047911 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
84 | NC_020834 | AGTTTA | 2 | 12 | 2094841 | 2094852 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
85 | NC_020834 | AATGAA | 2 | 12 | 2111515 | 2111526 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
86 | NC_020834 | AGTGAC | 2 | 12 | 2124799 | 2124810 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
87 | NC_020834 | CTGTAT | 2 | 12 | 2168945 | 2168956 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
88 | NC_020834 | TAAACT | 2 | 12 | 2182490 | 2182501 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
89 | NC_020834 | CTTGAA | 2 | 12 | 2213306 | 2213317 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
90 | NC_020834 | TATAGG | 2 | 12 | 2258399 | 2258410 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
91 | NC_020834 | TATAAA | 2 | 12 | 2285319 | 2285330 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
92 | NC_020834 | ATTTTA | 2 | 12 | 2289059 | 2289070 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
93 | NC_020834 | GTTTTT | 2 | 12 | 2300678 | 2300689 | 0 % | 83.33 % | 16.67 % | 0 % | Non-Coding |
94 | NC_020834 | TTTTGC | 2 | 12 | 2318754 | 2318765 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
95 | NC_020834 | ATTTCA | 2 | 12 | 2319975 | 2319986 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
96 | NC_020834 | GCCTTC | 2 | 12 | 2323289 | 2323300 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
97 | NC_020834 | AATTAA | 2 | 12 | 2324078 | 2324089 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
98 | NC_020834 | TAAATT | 2 | 12 | 2353026 | 2353037 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
99 | NC_020834 | TTTTGC | 2 | 12 | 2354516 | 2354527 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
100 | NC_020834 | ATTTCA | 2 | 12 | 2355737 | 2355748 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
101 | NC_020834 | GCCTTC | 2 | 12 | 2359154 | 2359165 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
102 | NC_020834 | AATTAA | 2 | 12 | 2359943 | 2359954 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
103 | NC_020834 | ACTTTA | 2 | 12 | 2417003 | 2417014 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
104 | NC_020834 | CTATAA | 2 | 12 | 2428059 | 2428070 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
105 | NC_020834 | ATTTCA | 2 | 12 | 2463116 | 2463127 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
106 | NC_020834 | GCCTTC | 2 | 12 | 2466430 | 2466441 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
107 | NC_020834 | AATTAA | 2 | 12 | 2467219 | 2467230 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
108 | NC_020834 | AAAAAC | 2 | 12 | 2467429 | 2467440 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
109 | NC_020834 | CTCTTT | 2 | 12 | 2502876 | 2502887 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
110 | NC_020834 | ATTTCA | 2 | 12 | 2520931 | 2520942 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
111 | NC_020834 | GCCTTC | 2 | 12 | 2524361 | 2524372 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
112 | NC_020834 | AATTAA | 2 | 12 | 2525150 | 2525161 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
113 | NC_020834 | TTTAAA | 2 | 12 | 2528419 | 2528430 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
114 | NC_020834 | CTATTC | 2 | 12 | 2532983 | 2532994 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |