Hexa-nucleotide Non-Coding Repeats of Mannheimia haemolytica USDA-ARS-USMARC-183
Total Repeats: 119
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020833 | TTTTAT | 2 | 12 | 43083 | 43094 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
2 | NC_020833 | TTTTCG | 2 | 12 | 48898 | 48909 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
3 | NC_020833 | GAATAG | 2 | 12 | 83455 | 83466 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
4 | NC_020833 | TTTAAA | 2 | 12 | 88060 | 88071 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
5 | NC_020833 | TTAATT | 2 | 12 | 91329 | 91340 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
6 | NC_020833 | CGAAGG | 2 | 12 | 92117 | 92128 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
7 | NC_020833 | AAGCGA | 2 | 12 | 93101 | 93112 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
8 | NC_020833 | TGAAAT | 2 | 12 | 95548 | 95559 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
9 | NC_020833 | TTAATT | 2 | 12 | 150470 | 150481 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
10 | NC_020833 | CGAAGG | 2 | 12 | 151258 | 151269 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
11 | NC_020833 | TGAAAT | 2 | 12 | 154573 | 154584 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
12 | NC_020833 | AAAAGA | 2 | 12 | 162502 | 162513 | 83.33 % | 0 % | 16.67 % | 0 % | Non-Coding |
13 | NC_020833 | TAAAGT | 2 | 12 | 200686 | 200697 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
14 | NC_020833 | TTAATT | 2 | 12 | 257717 | 257728 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
15 | NC_020833 | CGAAGG | 2 | 12 | 258505 | 258516 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
16 | NC_020833 | AAGCGA | 2 | 12 | 259489 | 259500 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
17 | NC_020833 | TGAAAT | 2 | 12 | 261936 | 261947 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
18 | NC_020833 | AAGCAA | 2 | 12 | 263155 | 263166 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
19 | NC_020833 | GGTAAA | 2 | 12 | 263245 | 263256 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
20 | NC_020833 | AATTTA | 2 | 12 | 264647 | 264658 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
21 | NC_020833 | TTAATT | 2 | 12 | 293863 | 293874 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
22 | NC_020833 | CGAAGG | 2 | 12 | 294651 | 294662 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
23 | NC_020833 | TGAAAT | 2 | 12 | 297966 | 297977 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
24 | NC_020833 | AAGCAA | 2 | 12 | 299185 | 299196 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
25 | NC_020833 | GGTAAA | 2 | 12 | 299275 | 299286 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
26 | NC_020833 | TTATTT | 2 | 12 | 312909 | 312920 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
27 | NC_020833 | AAAAAC | 2 | 12 | 317263 | 317274 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
28 | NC_020833 | TTAAAA | 2 | 12 | 328881 | 328892 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
29 | NC_020833 | TTTATA | 2 | 12 | 332622 | 332633 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
30 | NC_020833 | ACCTAT | 2 | 12 | 360749 | 360760 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
31 | NC_020833 | GTTCAA | 2 | 12 | 406030 | 406041 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | Non-Coding |
32 | NC_020833 | TGTCAC | 2 | 12 | 496673 | 496684 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
33 | NC_020833 | ACAAAA | 2 | 12 | 510273 | 510284 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
34 | NC_020833 | TAAACT | 2 | 12 | 526536 | 526547 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
35 | NC_020833 | CCTTAA | 2 | 12 | 586664 | 586675 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
36 | NC_020833 | TTGCAT | 2 | 12 | 641110 | 641121 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
37 | NC_020833 | ATAAAA | 2 | 12 | 649505 | 649516 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
38 | NC_020833 | TGGATT | 2 | 12 | 670659 | 670670 | 16.67 % | 50 % | 33.33 % | 0 % | Non-Coding |
39 | NC_020833 | TATGGC | 3 | 18 | 672241 | 672258 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
40 | NC_020833 | CGAAAA | 2 | 12 | 694100 | 694111 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
41 | NC_020833 | ATAAAA | 2 | 12 | 721777 | 721788 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
42 | NC_020833 | AATAGA | 2 | 12 | 725693 | 725704 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
43 | NC_020833 | TTAATT | 2 | 12 | 770810 | 770821 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
44 | NC_020833 | CGAAGG | 2 | 12 | 771598 | 771609 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
45 | NC_020833 | AAGCGA | 2 | 12 | 772582 | 772593 | 50 % | 0 % | 33.33 % | 16.67 % | Non-Coding |
46 | NC_020833 | TGAAAT | 2 | 12 | 775029 | 775040 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
47 | NC_020833 | AAGCAA | 2 | 12 | 776248 | 776259 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
48 | NC_020833 | GGTAAA | 2 | 12 | 776338 | 776349 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
49 | NC_020833 | TGTGCT | 2 | 12 | 882984 | 882995 | 0 % | 50 % | 33.33 % | 16.67 % | Non-Coding |
50 | NC_020833 | TGTTTT | 2 | 12 | 905382 | 905393 | 0 % | 83.33 % | 16.67 % | 0 % | Non-Coding |
51 | NC_020833 | TTATTT | 2 | 12 | 905452 | 905463 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
52 | NC_020833 | ATGAAA | 2 | 12 | 906224 | 906235 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
53 | NC_020833 | TATTTT | 2 | 12 | 932919 | 932930 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
54 | NC_020833 | TTTATT | 2 | 12 | 937839 | 937850 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
55 | NC_020833 | TTGATT | 2 | 12 | 987237 | 987248 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
56 | NC_020833 | AGTGCA | 2 | 12 | 993057 | 993068 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
57 | NC_020833 | AACAAA | 2 | 12 | 1010332 | 1010343 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
58 | NC_020833 | TAATCT | 2 | 12 | 1060896 | 1060907 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
59 | NC_020833 | GATATA | 2 | 12 | 1061004 | 1061015 | 50 % | 33.33 % | 16.67 % | 0 % | Non-Coding |
60 | NC_020833 | TAAAAA | 2 | 12 | 1081396 | 1081407 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
61 | NC_020833 | AAAAGT | 2 | 12 | 1102867 | 1102878 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
62 | NC_020833 | TTTTAT | 2 | 12 | 1133139 | 1133150 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
63 | NC_020833 | TATTAA | 2 | 12 | 1210280 | 1210291 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
64 | NC_020833 | AAAAAT | 2 | 12 | 1232888 | 1232899 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
65 | NC_020833 | TATTTT | 2 | 12 | 1232930 | 1232941 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
66 | NC_020833 | AGCTTG | 2 | 12 | 1252009 | 1252020 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
67 | NC_020833 | TTACAA | 2 | 12 | 1259842 | 1259853 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
68 | NC_020833 | CATATA | 2 | 12 | 1273067 | 1273078 | 50 % | 33.33 % | 0 % | 16.67 % | Non-Coding |
69 | NC_020833 | CTTTAA | 2 | 12 | 1336082 | 1336093 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
70 | NC_020833 | AAAAGT | 2 | 12 | 1395461 | 1395472 | 66.67 % | 16.67 % | 16.67 % | 0 % | Non-Coding |
71 | NC_020833 | GTTTTA | 2 | 12 | 1442271 | 1442282 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
72 | NC_020833 | AAATAA | 2 | 12 | 1453976 | 1453987 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
73 | NC_020833 | ATCACA | 2 | 12 | 1476070 | 1476081 | 50 % | 16.67 % | 0 % | 33.33 % | Non-Coding |
74 | NC_020833 | ATAATT | 2 | 12 | 1504724 | 1504735 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
75 | NC_020833 | CAAACG | 2 | 12 | 1625632 | 1625643 | 50 % | 0 % | 16.67 % | 33.33 % | Non-Coding |
76 | NC_020833 | CACAAA | 2 | 12 | 1681758 | 1681769 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
77 | NC_020833 | GATCGA | 2 | 12 | 1681869 | 1681880 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
78 | NC_020833 | AATTTT | 2 | 12 | 1719585 | 1719596 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
79 | NC_020833 | TATATC | 2 | 12 | 1749363 | 1749374 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
80 | NC_020833 | CCAAAA | 2 | 12 | 1782072 | 1782083 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
81 | NC_020833 | TTTGCC | 2 | 12 | 1813882 | 1813893 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
82 | NC_020833 | TATGTT | 2 | 12 | 1842599 | 1842610 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
83 | NC_020833 | CTTTGA | 2 | 12 | 1958531 | 1958542 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
84 | NC_020833 | TAAAAA | 2 | 12 | 1975380 | 1975391 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
85 | NC_020833 | AAATAA | 2 | 12 | 2040844 | 2040855 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
86 | NC_020833 | TCATTT | 2 | 12 | 2080679 | 2080690 | 16.67 % | 66.67 % | 0 % | 16.67 % | Non-Coding |
87 | NC_020833 | GTTGGT | 2 | 12 | 2168705 | 2168716 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
88 | NC_020833 | ATTCTC | 2 | 12 | 2182042 | 2182053 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |
89 | NC_020833 | TTTTGC | 2 | 12 | 2218534 | 2218545 | 0 % | 66.67 % | 16.67 % | 16.67 % | Non-Coding |
90 | NC_020833 | ATTTCA | 2 | 12 | 2219755 | 2219766 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
91 | NC_020833 | GCCTTC | 2 | 12 | 2223069 | 2223080 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
92 | NC_020833 | AATTAA | 2 | 12 | 2223858 | 2223869 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
93 | NC_020833 | AAAAAC | 2 | 12 | 2224068 | 2224079 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
94 | NC_020833 | ATCATT | 2 | 12 | 2233741 | 2233752 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
95 | NC_020833 | TCAATT | 2 | 12 | 2233842 | 2233853 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
96 | NC_020833 | GATCGA | 2 | 12 | 2237743 | 2237754 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | Non-Coding |
97 | NC_020833 | TAAATA | 2 | 12 | 2257045 | 2257056 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
98 | NC_020833 | GTATTT | 2 | 12 | 2281756 | 2281767 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
99 | NC_020833 | CAAAAA | 2 | 12 | 2286586 | 2286597 | 83.33 % | 0 % | 0 % | 16.67 % | Non-Coding |
100 | NC_020833 | TTTGTA | 2 | 12 | 2318489 | 2318500 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
101 | NC_020833 | TTACAC | 2 | 12 | 2339172 | 2339183 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
102 | NC_020833 | TAAATA | 2 | 12 | 2341368 | 2341379 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
103 | NC_020833 | TAAAAA | 2 | 12 | 2347981 | 2347992 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
104 | NC_020833 | AATATT | 2 | 12 | 2350894 | 2350905 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
105 | NC_020833 | CAATAG | 2 | 12 | 2367919 | 2367930 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
106 | NC_020833 | TTTTTA | 2 | 12 | 2397035 | 2397046 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
107 | NC_020833 | CTTTCA | 2 | 12 | 2400319 | 2400330 | 16.67 % | 50 % | 0 % | 33.33 % | Non-Coding |
108 | NC_020833 | TTTTAA | 2 | 12 | 2444504 | 2444515 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
109 | NC_020833 | ATTTTT | 2 | 12 | 2457120 | 2457131 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
110 | NC_020833 | TAAATA | 2 | 12 | 2476566 | 2476577 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
111 | NC_020833 | AAAAGC | 2 | 12 | 2485462 | 2485473 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
112 | NC_020833 | TAAATA | 2 | 12 | 2487744 | 2487755 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
113 | NC_020833 | ATAAAA | 2 | 12 | 2491758 | 2491769 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
114 | NC_020833 | GATATT | 2 | 12 | 2498503 | 2498514 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
115 | NC_020833 | GTTTAA | 2 | 12 | 2526741 | 2526752 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
116 | NC_020833 | AGGGGG | 2 | 12 | 2552524 | 2552535 | 16.67 % | 0 % | 83.33 % | 0 % | Non-Coding |
117 | NC_020833 | AATAAA | 2 | 12 | 2588155 | 2588166 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
118 | NC_020833 | AAATCA | 2 | 12 | 2588816 | 2588827 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
119 | NC_020833 | TTAAAT | 2 | 12 | 2627477 | 2627488 | 50 % | 50 % | 0 % | 0 % | Non-Coding |