Hexa-nucleotide Repeats of Mannheimia haemolytica USDA-ARS-USMARC-183
Total Repeats: 1087
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1001 | NC_020833 | TCTATT | 2 | 12 | 2434254 | 2434265 | 16.67 % | 66.67 % | 0 % | 16.67 % | 472335010 |
1002 | NC_020833 | AAAATC | 2 | 12 | 2439362 | 2439373 | 66.67 % | 16.67 % | 0 % | 16.67 % | 472335012 |
1003 | NC_020833 | CTTTAT | 2 | 12 | 2441961 | 2441972 | 16.67 % | 66.67 % | 0 % | 16.67 % | 472335015 |
1004 | NC_020833 | TTTTAA | 2 | 12 | 2444504 | 2444515 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
1005 | NC_020833 | TTAGAT | 2 | 12 | 2454759 | 2454770 | 33.33 % | 50 % | 16.67 % | 0 % | 472335028 |
1006 | NC_020833 | ATTTTT | 2 | 12 | 2457120 | 2457131 | 16.67 % | 83.33 % | 0 % | 0 % | Non-Coding |
1007 | NC_020833 | TTTCGT | 2 | 12 | 2457763 | 2457774 | 0 % | 66.67 % | 16.67 % | 16.67 % | 472335031 |
1008 | NC_020833 | AATCCA | 2 | 12 | 2461465 | 2461476 | 50 % | 16.67 % | 0 % | 33.33 % | 472335034 |
1009 | NC_020833 | GCCAGA | 2 | 12 | 2463173 | 2463184 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472335037 |
1010 | NC_020833 | TTTTTC | 2 | 12 | 2466800 | 2466811 | 0 % | 83.33 % | 0 % | 16.67 % | 472335039 |
1011 | NC_020833 | ATGAAT | 2 | 12 | 2467378 | 2467389 | 50 % | 33.33 % | 16.67 % | 0 % | 472335039 |
1012 | NC_020833 | GTCATT | 2 | 12 | 2470067 | 2470078 | 16.67 % | 50 % | 16.67 % | 16.67 % | 472335040 |
1013 | NC_020833 | TCTATT | 2 | 12 | 2472107 | 2472118 | 16.67 % | 66.67 % | 0 % | 16.67 % | 472335041 |
1014 | NC_020833 | CAATCG | 2 | 12 | 2473654 | 2473665 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 472335042 |
1015 | NC_020833 | TAAATA | 2 | 12 | 2476566 | 2476577 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
1016 | NC_020833 | TATTGA | 2 | 12 | 2480402 | 2480413 | 33.33 % | 50 % | 16.67 % | 0 % | 472335051 |
1017 | NC_020833 | AGCCCA | 2 | 12 | 2481297 | 2481308 | 33.33 % | 0 % | 16.67 % | 50 % | 472335052 |
1018 | NC_020833 | CTTTAT | 2 | 12 | 2481856 | 2481867 | 16.67 % | 66.67 % | 0 % | 16.67 % | 472335053 |
1019 | NC_020833 | GGAGCT | 2 | 12 | 2484173 | 2484184 | 16.67 % | 16.67 % | 50 % | 16.67 % | 472335054 |
1020 | NC_020833 | AAAAGC | 2 | 12 | 2485462 | 2485473 | 66.67 % | 0 % | 16.67 % | 16.67 % | Non-Coding |
1021 | NC_020833 | TAAATA | 2 | 12 | 2487744 | 2487755 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
1022 | NC_020833 | ATAAAA | 2 | 12 | 2491758 | 2491769 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
1023 | NC_020833 | TAAAAT | 2 | 12 | 2492194 | 2492205 | 66.67 % | 33.33 % | 0 % | 0 % | 472335066 |
1024 | NC_020833 | TCTTTA | 2 | 12 | 2493584 | 2493595 | 16.67 % | 66.67 % | 0 % | 16.67 % | 472335066 |
1025 | NC_020833 | CGGCAA | 2 | 12 | 2494478 | 2494489 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472335068 |
1026 | NC_020833 | GCGGTG | 2 | 12 | 2494880 | 2494891 | 0 % | 16.67 % | 66.67 % | 16.67 % | 472335068 |
1027 | NC_020833 | ACCCAA | 2 | 12 | 2495425 | 2495436 | 50 % | 0 % | 0 % | 50 % | 472335068 |
1028 | NC_020833 | TTCCGC | 2 | 12 | 2495797 | 2495808 | 0 % | 33.33 % | 16.67 % | 50 % | 472335068 |
1029 | NC_020833 | GATATT | 2 | 12 | 2498503 | 2498514 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
1030 | NC_020833 | GGCTTT | 2 | 12 | 2499605 | 2499616 | 0 % | 50 % | 33.33 % | 16.67 % | 472335074 |
1031 | NC_020833 | CCTAAA | 2 | 12 | 2500927 | 2500938 | 50 % | 16.67 % | 0 % | 33.33 % | 472335075 |
1032 | NC_020833 | CTACCG | 2 | 12 | 2504827 | 2504838 | 16.67 % | 16.67 % | 16.67 % | 50 % | 472335079 |
1033 | NC_020833 | TGGCTT | 2 | 12 | 2505639 | 2505650 | 0 % | 50 % | 33.33 % | 16.67 % | 472335079 |
1034 | NC_020833 | AAAAAC | 2 | 12 | 2511323 | 2511334 | 83.33 % | 0 % | 0 % | 16.67 % | 472335084 |
1035 | NC_020833 | TATTGA | 2 | 12 | 2513660 | 2513671 | 33.33 % | 50 % | 16.67 % | 0 % | 472335086 |
1036 | NC_020833 | ACCTTT | 2 | 12 | 2522171 | 2522182 | 16.67 % | 50 % | 0 % | 33.33 % | 472335101 |
1037 | NC_020833 | CACCCA | 2 | 12 | 2523832 | 2523843 | 33.33 % | 0 % | 0 % | 66.67 % | 472335104 |
1038 | NC_020833 | GTTTAA | 2 | 12 | 2526741 | 2526752 | 33.33 % | 50 % | 16.67 % | 0 % | Non-Coding |
1039 | NC_020833 | TATCGG | 2 | 12 | 2528783 | 2528794 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 472335110 |
1040 | NC_020833 | ACTTAA | 2 | 12 | 2529049 | 2529060 | 50 % | 33.33 % | 0 % | 16.67 % | 472335110 |
1041 | NC_020833 | TTTTCC | 2 | 12 | 2529226 | 2529237 | 0 % | 66.67 % | 0 % | 33.33 % | 472335111 |
1042 | NC_020833 | CGCTGC | 2 | 12 | 2530647 | 2530658 | 0 % | 16.67 % | 33.33 % | 50 % | 472335111 |
1043 | NC_020833 | CTCGCT | 2 | 12 | 2530938 | 2530949 | 0 % | 33.33 % | 16.67 % | 50 % | 472335111 |
1044 | NC_020833 | TCGCCC | 2 | 12 | 2531781 | 2531792 | 0 % | 16.67 % | 16.67 % | 66.67 % | 472335112 |
1045 | NC_020833 | AGGATT | 2 | 12 | 2536811 | 2536822 | 33.33 % | 33.33 % | 33.33 % | 0 % | 472335116 |
1046 | NC_020833 | TTAATT | 2 | 12 | 2537527 | 2537538 | 33.33 % | 66.67 % | 0 % | 0 % | 472335117 |
1047 | NC_020833 | GAAAGT | 2 | 12 | 2539375 | 2539386 | 50 % | 16.67 % | 33.33 % | 0 % | 472335120 |
1048 | NC_020833 | TTAGTG | 2 | 12 | 2540759 | 2540770 | 16.67 % | 50 % | 33.33 % | 0 % | 472335122 |
1049 | NC_020833 | CGGCAA | 2 | 12 | 2543506 | 2543517 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472335126 |
1050 | NC_020833 | TGGCTT | 2 | 12 | 2545535 | 2545546 | 0 % | 50 % | 33.33 % | 16.67 % | 472335128 |
1051 | NC_020833 | AATTTA | 2 | 12 | 2546676 | 2546687 | 50 % | 50 % | 0 % | 0 % | 472335130 |
1052 | NC_020833 | GGTCTA | 2 | 12 | 2549003 | 2549014 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 472335132 |
1053 | NC_020833 | TTATTG | 2 | 12 | 2549713 | 2549724 | 16.67 % | 66.67 % | 16.67 % | 0 % | 472335133 |
1054 | NC_020833 | CGCCAC | 2 | 12 | 2550499 | 2550510 | 16.67 % | 0 % | 16.67 % | 66.67 % | 472335133 |
1055 | NC_020833 | AGGGGG | 2 | 12 | 2552524 | 2552535 | 16.67 % | 0 % | 83.33 % | 0 % | Non-Coding |
1056 | NC_020833 | GGCAAT | 2 | 12 | 2554231 | 2554242 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 472335137 |
1057 | NC_020833 | AGCTTC | 2 | 12 | 2556058 | 2556069 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 472335139 |
1058 | NC_020833 | AGCCTT | 2 | 12 | 2557812 | 2557823 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 472335140 |
1059 | NC_020833 | TGTTCT | 2 | 12 | 2563353 | 2563364 | 0 % | 66.67 % | 16.67 % | 16.67 % | 472335145 |
1060 | NC_020833 | AACCCA | 2 | 12 | 2573027 | 2573038 | 50 % | 0 % | 0 % | 50 % | 472335155 |
1061 | NC_020833 | GATATT | 2 | 12 | 2574072 | 2574083 | 33.33 % | 50 % | 16.67 % | 0 % | 472335156 |
1062 | NC_020833 | TTGTTT | 2 | 12 | 2577208 | 2577219 | 0 % | 83.33 % | 16.67 % | 0 % | 472335159 |
1063 | NC_020833 | GTATTG | 2 | 12 | 2580129 | 2580140 | 16.67 % | 50 % | 33.33 % | 0 % | 472335161 |
1064 | NC_020833 | GATTGC | 2 | 12 | 2583144 | 2583155 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 472335162 |
1065 | NC_020833 | CAAAAA | 2 | 12 | 2584032 | 2584043 | 83.33 % | 0 % | 0 % | 16.67 % | 472335163 |
1066 | NC_020833 | CTATAG | 2 | 12 | 2584711 | 2584722 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 472335163 |
1067 | NC_020833 | TAATTA | 2 | 12 | 2586800 | 2586811 | 50 % | 50 % | 0 % | 0 % | 472335165 |
1068 | NC_020833 | AATAAA | 2 | 12 | 2588155 | 2588166 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
1069 | NC_020833 | AAATCA | 2 | 12 | 2588816 | 2588827 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
1070 | NC_020833 | CCCAAA | 2 | 12 | 2593018 | 2593029 | 50 % | 0 % | 0 % | 50 % | 472335172 |
1071 | NC_020833 | CGGATT | 2 | 12 | 2597780 | 2597791 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 472335177 |
1072 | NC_020833 | TTGGTG | 2 | 12 | 2601768 | 2601779 | 0 % | 50 % | 50 % | 0 % | 472335180 |
1073 | NC_020833 | GAAAAA | 2 | 12 | 2603664 | 2603675 | 83.33 % | 0 % | 16.67 % | 0 % | 472335183 |
1074 | NC_020833 | ATTCCC | 2 | 12 | 2605699 | 2605710 | 16.67 % | 33.33 % | 0 % | 50 % | 472335186 |
1075 | NC_020833 | CAATCG | 2 | 12 | 2607203 | 2607214 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 472335188 |
1076 | NC_020833 | TTGTGC | 2 | 12 | 2608849 | 2608860 | 0 % | 50 % | 33.33 % | 16.67 % | 472335189 |
1077 | NC_020833 | TCCCAT | 2 | 12 | 2615604 | 2615615 | 16.67 % | 33.33 % | 0 % | 50 % | 472335198 |
1078 | NC_020833 | CATCGC | 2 | 12 | 2618107 | 2618118 | 16.67 % | 16.67 % | 16.67 % | 50 % | 472335202 |
1079 | NC_020833 | GTAAAC | 2 | 12 | 2620622 | 2620633 | 50 % | 16.67 % | 16.67 % | 16.67 % | 472335204 |
1080 | NC_020833 | TTAGGT | 2 | 12 | 2621325 | 2621336 | 16.67 % | 50 % | 33.33 % | 0 % | 472335205 |
1081 | NC_020833 | ATCACA | 2 | 12 | 2623350 | 2623361 | 50 % | 16.67 % | 0 % | 33.33 % | 472335207 |
1082 | NC_020833 | GATTTT | 2 | 12 | 2624511 | 2624522 | 16.67 % | 66.67 % | 16.67 % | 0 % | 472335209 |
1083 | NC_020833 | ATTCTA | 2 | 12 | 2625741 | 2625752 | 33.33 % | 50 % | 0 % | 16.67 % | 472335210 |
1084 | NC_020833 | TTAAAT | 2 | 12 | 2627477 | 2627488 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
1085 | NC_020833 | TTTGAA | 2 | 12 | 2633789 | 2633800 | 33.33 % | 50 % | 16.67 % | 0 % | 472335217 |
1086 | NC_020833 | TTCTGG | 2 | 12 | 2648537 | 2648548 | 0 % | 50 % | 33.33 % | 16.67 % | 472335231 |
1087 | NC_020833 | CCTGCT | 2 | 12 | 2653993 | 2654004 | 0 % | 33.33 % | 16.67 % | 50 % | 472335235 |