Tri-nucleotide Coding Repeats of Mannheimia haemolytica USDA-ARS-USMARC-183
Total Repeats: 29115
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
29001 | NC_020833 | TTG | 2 | 6 | 2649089 | 2649094 | 0 % | 66.67 % | 33.33 % | 0 % | 472335232 |
29002 | NC_020833 | AAT | 2 | 6 | 2649161 | 2649166 | 66.67 % | 33.33 % | 0 % | 0 % | 472335232 |
29003 | NC_020833 | CAG | 2 | 6 | 2649194 | 2649199 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472335232 |
29004 | NC_020833 | ATA | 2 | 6 | 2649207 | 2649212 | 66.67 % | 33.33 % | 0 % | 0 % | 472335232 |
29005 | NC_020833 | TCA | 3 | 9 | 2649219 | 2649227 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335232 |
29006 | NC_020833 | CTC | 2 | 6 | 2649266 | 2649271 | 0 % | 33.33 % | 0 % | 66.67 % | 472335232 |
29007 | NC_020833 | TCT | 2 | 6 | 2649387 | 2649392 | 0 % | 66.67 % | 0 % | 33.33 % | 472335232 |
29008 | NC_020833 | TCA | 2 | 6 | 2649522 | 2649527 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335232 |
29009 | NC_020833 | AAT | 2 | 6 | 2649536 | 2649541 | 66.67 % | 33.33 % | 0 % | 0 % | 472335232 |
29010 | NC_020833 | TCA | 2 | 6 | 2649693 | 2649698 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335232 |
29011 | NC_020833 | TCT | 2 | 6 | 2649750 | 2649755 | 0 % | 66.67 % | 0 % | 33.33 % | 472335232 |
29012 | NC_020833 | AAT | 2 | 6 | 2649776 | 2649781 | 66.67 % | 33.33 % | 0 % | 0 % | 472335232 |
29013 | NC_020833 | CAT | 3 | 9 | 2649799 | 2649807 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335232 |
29014 | NC_020833 | AAC | 2 | 6 | 2649810 | 2649815 | 66.67 % | 0 % | 0 % | 33.33 % | 472335232 |
29015 | NC_020833 | TCA | 2 | 6 | 2649915 | 2649920 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335232 |
29016 | NC_020833 | CCA | 2 | 6 | 2650057 | 2650062 | 33.33 % | 0 % | 0 % | 66.67 % | 472335232 |
29017 | NC_020833 | AAT | 2 | 6 | 2650130 | 2650135 | 66.67 % | 33.33 % | 0 % | 0 % | 472335232 |
29018 | NC_020833 | AGA | 2 | 6 | 2650173 | 2650178 | 66.67 % | 0 % | 33.33 % | 0 % | 472335233 |
29019 | NC_020833 | CAC | 2 | 6 | 2650185 | 2650190 | 33.33 % | 0 % | 0 % | 66.67 % | 472335233 |
29020 | NC_020833 | GAA | 2 | 6 | 2650204 | 2650209 | 66.67 % | 0 % | 33.33 % | 0 % | 472335233 |
29021 | NC_020833 | GTT | 2 | 6 | 2650251 | 2650256 | 0 % | 66.67 % | 33.33 % | 0 % | 472335233 |
29022 | NC_020833 | GGC | 2 | 6 | 2650446 | 2650451 | 0 % | 0 % | 66.67 % | 33.33 % | 472335233 |
29023 | NC_020833 | CGC | 2 | 6 | 2650900 | 2650905 | 0 % | 0 % | 33.33 % | 66.67 % | 472335233 |
29024 | NC_020833 | TGT | 2 | 6 | 2650925 | 2650930 | 0 % | 66.67 % | 33.33 % | 0 % | 472335233 |
29025 | NC_020833 | TGG | 2 | 6 | 2650951 | 2650956 | 0 % | 33.33 % | 66.67 % | 0 % | 472335233 |
29026 | NC_020833 | CAA | 2 | 6 | 2650974 | 2650979 | 66.67 % | 0 % | 0 % | 33.33 % | 472335233 |
29027 | NC_020833 | TCT | 2 | 6 | 2651072 | 2651077 | 0 % | 66.67 % | 0 % | 33.33 % | 472335233 |
29028 | NC_020833 | TCA | 2 | 6 | 2651162 | 2651167 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335233 |
29029 | NC_020833 | TAA | 2 | 6 | 2651269 | 2651274 | 66.67 % | 33.33 % | 0 % | 0 % | 472335233 |
29030 | NC_020833 | TGA | 2 | 6 | 2651277 | 2651282 | 33.33 % | 33.33 % | 33.33 % | 0 % | 472335233 |
29031 | NC_020833 | GCA | 2 | 6 | 2651298 | 2651303 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472335233 |
29032 | NC_020833 | AAT | 2 | 6 | 2651419 | 2651424 | 66.67 % | 33.33 % | 0 % | 0 % | 472335233 |
29033 | NC_020833 | AGA | 2 | 6 | 2651443 | 2651448 | 66.67 % | 0 % | 33.33 % | 0 % | 472335233 |
29034 | NC_020833 | TGG | 2 | 6 | 2651550 | 2651555 | 0 % | 33.33 % | 66.67 % | 0 % | 472335234 |
29035 | NC_020833 | TGC | 2 | 6 | 2651607 | 2651612 | 0 % | 33.33 % | 33.33 % | 33.33 % | 472335234 |
29036 | NC_020833 | CAT | 2 | 6 | 2651620 | 2651625 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335234 |
29037 | NC_020833 | TTC | 2 | 6 | 2651665 | 2651670 | 0 % | 66.67 % | 0 % | 33.33 % | 472335234 |
29038 | NC_020833 | TGC | 2 | 6 | 2651696 | 2651701 | 0 % | 33.33 % | 33.33 % | 33.33 % | 472335234 |
29039 | NC_020833 | CCA | 2 | 6 | 2651763 | 2651768 | 33.33 % | 0 % | 0 % | 66.67 % | 472335234 |
29040 | NC_020833 | CTT | 2 | 6 | 2651769 | 2651774 | 0 % | 66.67 % | 0 % | 33.33 % | 472335234 |
29041 | NC_020833 | AAT | 2 | 6 | 2651827 | 2651832 | 66.67 % | 33.33 % | 0 % | 0 % | 472335234 |
29042 | NC_020833 | CAA | 2 | 6 | 2652105 | 2652110 | 66.67 % | 0 % | 0 % | 33.33 % | 472335235 |
29043 | NC_020833 | TTC | 2 | 6 | 2652438 | 2652443 | 0 % | 66.67 % | 0 % | 33.33 % | 472335235 |
29044 | NC_020833 | CCA | 2 | 6 | 2652546 | 2652551 | 33.33 % | 0 % | 0 % | 66.67 % | 472335235 |
29045 | NC_020833 | TAA | 2 | 6 | 2652617 | 2652622 | 66.67 % | 33.33 % | 0 % | 0 % | 472335235 |
29046 | NC_020833 | TAA | 3 | 9 | 2652660 | 2652668 | 66.67 % | 33.33 % | 0 % | 0 % | 472335235 |
29047 | NC_020833 | CCA | 2 | 6 | 2652728 | 2652733 | 33.33 % | 0 % | 0 % | 66.67 % | 472335235 |
29048 | NC_020833 | TGC | 2 | 6 | 2652765 | 2652770 | 0 % | 33.33 % | 33.33 % | 33.33 % | 472335235 |
29049 | NC_020833 | GAC | 2 | 6 | 2652875 | 2652880 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472335235 |
29050 | NC_020833 | ATG | 2 | 6 | 2652908 | 2652913 | 33.33 % | 33.33 % | 33.33 % | 0 % | 472335235 |
29051 | NC_020833 | AAT | 2 | 6 | 2653071 | 2653076 | 66.67 % | 33.33 % | 0 % | 0 % | 472335235 |
29052 | NC_020833 | CTG | 2 | 6 | 2653079 | 2653084 | 0 % | 33.33 % | 33.33 % | 33.33 % | 472335235 |
29053 | NC_020833 | GAA | 2 | 6 | 2653194 | 2653199 | 66.67 % | 0 % | 33.33 % | 0 % | 472335235 |
29054 | NC_020833 | CCA | 2 | 6 | 2653283 | 2653288 | 33.33 % | 0 % | 0 % | 66.67 % | 472335235 |
29055 | NC_020833 | TCT | 2 | 6 | 2653480 | 2653485 | 0 % | 66.67 % | 0 % | 33.33 % | 472335235 |
29056 | NC_020833 | GTA | 2 | 6 | 2653512 | 2653517 | 33.33 % | 33.33 % | 33.33 % | 0 % | 472335235 |
29057 | NC_020833 | AAG | 2 | 6 | 2653570 | 2653575 | 66.67 % | 0 % | 33.33 % | 0 % | 472335235 |
29058 | NC_020833 | AAG | 2 | 6 | 2653684 | 2653689 | 66.67 % | 0 % | 33.33 % | 0 % | 472335235 |
29059 | NC_020833 | ATC | 2 | 6 | 2653732 | 2653737 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335235 |
29060 | NC_020833 | TGA | 2 | 6 | 2653785 | 2653790 | 33.33 % | 33.33 % | 33.33 % | 0 % | 472335235 |
29061 | NC_020833 | TCA | 2 | 6 | 2653838 | 2653843 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335235 |
29062 | NC_020833 | GTC | 2 | 6 | 2653864 | 2653869 | 0 % | 33.33 % | 33.33 % | 33.33 % | 472335235 |
29063 | NC_020833 | ACG | 2 | 6 | 2653870 | 2653875 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472335235 |
29064 | NC_020833 | GAA | 2 | 6 | 2653915 | 2653920 | 66.67 % | 0 % | 33.33 % | 0 % | 472335235 |
29065 | NC_020833 | ACC | 2 | 6 | 2653921 | 2653926 | 33.33 % | 0 % | 0 % | 66.67 % | 472335235 |
29066 | NC_020833 | ACC | 2 | 6 | 2653941 | 2653946 | 33.33 % | 0 % | 0 % | 66.67 % | 472335235 |
29067 | NC_020833 | TAA | 2 | 6 | 2653979 | 2653984 | 66.67 % | 33.33 % | 0 % | 0 % | 472335235 |
29068 | NC_020833 | AGT | 2 | 6 | 2653985 | 2653990 | 33.33 % | 33.33 % | 33.33 % | 0 % | 472335235 |
29069 | NC_020833 | ATA | 2 | 6 | 2654024 | 2654029 | 66.67 % | 33.33 % | 0 % | 0 % | 472335235 |
29070 | NC_020833 | TTG | 2 | 6 | 2654097 | 2654102 | 0 % | 66.67 % | 33.33 % | 0 % | 472335235 |
29071 | NC_020833 | GAA | 2 | 6 | 2654169 | 2654174 | 66.67 % | 0 % | 33.33 % | 0 % | 472335235 |
29072 | NC_020833 | AAT | 2 | 6 | 2654199 | 2654204 | 66.67 % | 33.33 % | 0 % | 0 % | 472335235 |
29073 | NC_020833 | CGG | 2 | 6 | 2654227 | 2654232 | 0 % | 0 % | 66.67 % | 33.33 % | 472335235 |
29074 | NC_020833 | ATA | 2 | 6 | 2654272 | 2654277 | 66.67 % | 33.33 % | 0 % | 0 % | 472335235 |
29075 | NC_020833 | AGA | 2 | 6 | 2654321 | 2654326 | 66.67 % | 0 % | 33.33 % | 0 % | 472335235 |
29076 | NC_020833 | ATA | 2 | 6 | 2654331 | 2654336 | 66.67 % | 33.33 % | 0 % | 0 % | 472335235 |
29077 | NC_020833 | ATG | 2 | 6 | 2654388 | 2654393 | 33.33 % | 33.33 % | 33.33 % | 0 % | 472335235 |
29078 | NC_020833 | GTC | 2 | 6 | 2654475 | 2654480 | 0 % | 33.33 % | 33.33 % | 33.33 % | 472335235 |
29079 | NC_020833 | CAC | 3 | 9 | 2654481 | 2654489 | 33.33 % | 0 % | 0 % | 66.67 % | 472335235 |
29080 | NC_020833 | ATA | 2 | 6 | 2654550 | 2654555 | 66.67 % | 33.33 % | 0 % | 0 % | 472335235 |
29081 | NC_020833 | ATC | 2 | 6 | 2654968 | 2654973 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335236 |
29082 | NC_020833 | TCT | 2 | 6 | 2654974 | 2654979 | 0 % | 66.67 % | 0 % | 33.33 % | 472335236 |
29083 | NC_020833 | ATA | 2 | 6 | 2655168 | 2655173 | 66.67 % | 33.33 % | 0 % | 0 % | 472335236 |
29084 | NC_020833 | GCT | 2 | 6 | 2655244 | 2655249 | 0 % | 33.33 % | 33.33 % | 33.33 % | 472335236 |
29085 | NC_020833 | GTT | 2 | 6 | 2655300 | 2655305 | 0 % | 66.67 % | 33.33 % | 0 % | 472335236 |
29086 | NC_020833 | TTG | 2 | 6 | 2655401 | 2655406 | 0 % | 66.67 % | 33.33 % | 0 % | 472335236 |
29087 | NC_020833 | ATC | 2 | 6 | 2655456 | 2655461 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335236 |
29088 | NC_020833 | TGC | 2 | 6 | 2655627 | 2655632 | 0 % | 33.33 % | 33.33 % | 33.33 % | 472335236 |
29089 | NC_020833 | ATA | 2 | 6 | 2655741 | 2655746 | 66.67 % | 33.33 % | 0 % | 0 % | 472335236 |
29090 | NC_020833 | TGC | 2 | 6 | 2656178 | 2656183 | 0 % | 33.33 % | 33.33 % | 33.33 % | 472335237 |
29091 | NC_020833 | TAA | 2 | 6 | 2656239 | 2656244 | 66.67 % | 33.33 % | 0 % | 0 % | 472335237 |
29092 | NC_020833 | TCA | 2 | 6 | 2656318 | 2656323 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335237 |
29093 | NC_020833 | TTG | 2 | 6 | 2656392 | 2656397 | 0 % | 66.67 % | 33.33 % | 0 % | 472335237 |
29094 | NC_020833 | CCA | 2 | 6 | 2656484 | 2656489 | 33.33 % | 0 % | 0 % | 66.67 % | 472335237 |
29095 | NC_020833 | GGT | 2 | 6 | 2656589 | 2656594 | 0 % | 33.33 % | 66.67 % | 0 % | 472335237 |
29096 | NC_020833 | GGT | 2 | 6 | 2656791 | 2656796 | 0 % | 33.33 % | 66.67 % | 0 % | 472335237 |
29097 | NC_020833 | TCA | 2 | 6 | 2656897 | 2656902 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335237 |
29098 | NC_020833 | GAT | 2 | 6 | 2656911 | 2656916 | 33.33 % | 33.33 % | 33.33 % | 0 % | 472335237 |
29099 | NC_020833 | TTG | 2 | 6 | 2656992 | 2656997 | 0 % | 66.67 % | 33.33 % | 0 % | 472335237 |
29100 | NC_020833 | TGT | 2 | 6 | 2657395 | 2657400 | 0 % | 66.67 % | 33.33 % | 0 % | 472335237 |
29101 | NC_020833 | TTC | 2 | 6 | 2657430 | 2657435 | 0 % | 66.67 % | 0 % | 33.33 % | 472335237 |
29102 | NC_020833 | TTG | 2 | 6 | 2657442 | 2657447 | 0 % | 66.67 % | 33.33 % | 0 % | 472335237 |
29103 | NC_020833 | TTC | 2 | 6 | 2657535 | 2657540 | 0 % | 66.67 % | 0 % | 33.33 % | 472335237 |
29104 | NC_020833 | ATA | 2 | 6 | 2657569 | 2657574 | 66.67 % | 33.33 % | 0 % | 0 % | 472335237 |
29105 | NC_020833 | CAG | 2 | 6 | 2657586 | 2657591 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472335237 |
29106 | NC_020833 | CTT | 2 | 6 | 2657633 | 2657638 | 0 % | 66.67 % | 0 % | 33.33 % | 472335237 |
29107 | NC_020833 | GCC | 2 | 6 | 2657670 | 2657675 | 0 % | 0 % | 33.33 % | 66.67 % | 472335237 |
29108 | NC_020833 | TGA | 2 | 6 | 2657707 | 2657712 | 33.33 % | 33.33 % | 33.33 % | 0 % | 472335237 |
29109 | NC_020833 | TTC | 2 | 6 | 2657796 | 2657801 | 0 % | 66.67 % | 0 % | 33.33 % | 472335237 |
29110 | NC_020833 | CGG | 2 | 6 | 2657870 | 2657875 | 0 % | 0 % | 66.67 % | 33.33 % | 472335237 |
29111 | NC_020833 | GAT | 2 | 6 | 2657880 | 2657885 | 33.33 % | 33.33 % | 33.33 % | 0 % | 472335237 |
29112 | NC_020833 | CAT | 2 | 6 | 2658074 | 2658079 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335238 |
29113 | NC_020833 | AAT | 2 | 6 | 2658093 | 2658098 | 66.67 % | 33.33 % | 0 % | 0 % | 472335238 |
29114 | NC_020833 | TTG | 2 | 6 | 2658111 | 2658116 | 0 % | 66.67 % | 33.33 % | 0 % | 472335238 |
29115 | NC_020833 | TCA | 2 | 6 | 2658188 | 2658193 | 33.33 % | 33.33 % | 0 % | 33.33 % | 472335238 |