MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Lactobacillus brevis KB290 plasmid pKB290-1 DNA

Total Repeats: 72

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020820	GTT	2	6	9	14	0 %	66.67 %	33.33 %	0 %	Non-Coding
2	NC_020820	CCT	2	6	2661	2666	0 %	33.33 %	0 %	66.67 %	Non-Coding
3	NC_020820	TTA	2	6	2700	2705	33.33 %	66.67 %	0 %	0 %	Non-Coding
4	NC_020820	TCA	2	6	4373	4378	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5	NC_020820	CCT	2	6	5281	5286	0 %	33.33 %	0 %	66.67 %	Non-Coding
6	NC_020820	CTT	2	6	5372	5377	0 %	66.67 %	0 %	33.33 %	Non-Coding
7	NC_020820	CAA	3	9	5623	5631	66.67 %	0 %	0 %	33.33 %	Non-Coding
8	NC_020820	TCA	2	6	5644	5649	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9	NC_020820	TCC	2	6	5688	5693	0 %	33.33 %	0 %	66.67 %	Non-Coding
10	NC_020820	CTT	2	6	7253	7258	0 %	66.67 %	0 %	33.33 %	Non-Coding
11	NC_020820	AAC	2	6	7371	7376	66.67 %	0 %	0 %	33.33 %	Non-Coding
12	NC_020820	TGA	2	6	7378	7383	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
13	NC_020820	TAA	2	6	7400	7405	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_020820	CTT	2	6	7422	7427	0 %	66.67 %	0 %	33.33 %	Non-Coding
15	NC_020820	TCC	2	6	8890	8895	0 %	33.33 %	0 %	66.67 %	Non-Coding
16	NC_020820	CCT	2	6	15457	15462	0 %	33.33 %	0 %	66.67 %	Non-Coding
17	NC_020820	ATT	2	6	15531	15536	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_020820	AGG	2	6	15537	15542	33.33 %	0 %	66.67 %	0 %	Non-Coding
19	NC_020820	CTG	2	6	15594	15599	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
20	NC_020820	TTC	2	6	15689	15694	0 %	66.67 %	0 %	33.33 %	Non-Coding
21	NC_020820	GCC	2	6	15712	15717	0 %	0 %	33.33 %	66.67 %	Non-Coding
22	NC_020820	AAT	2	6	15824	15829	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_020820	TGT	2	6	17987	17992	0 %	66.67 %	33.33 %	0 %	Non-Coding
24	NC_020820	CTG	2	6	18086	18091	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
25	NC_020820	TCA	2	6	18144	18149	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
26	NC_020820	ATT	2	6	18187	18192	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_020820	GTT	2	6	18936	18941	0 %	66.67 %	33.33 %	0 %	Non-Coding
28	NC_020820	AAC	2	6	20823	20828	66.67 %	0 %	0 %	33.33 %	Non-Coding
29	NC_020820	AGT	2	6	20996	21001	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
30	NC_020820	GTT	2	6	21086	21091	0 %	66.67 %	33.33 %	0 %	Non-Coding
31	NC_020820	AGA	2	6	21185	21190	66.67 %	0 %	33.33 %	0 %	Non-Coding
32	NC_020820	AAC	2	6	21512	21517	66.67 %	0 %	0 %	33.33 %	Non-Coding
33	NC_020820	TCC	2	6	21782	21787	0 %	33.33 %	0 %	66.67 %	Non-Coding
34	NC_020820	CTC	2	6	22647	22652	0 %	33.33 %	0 %	66.67 %	Non-Coding
35	NC_020820	TAA	2	6	22671	22676	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_020820	ATA	2	6	22691	22696	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_020820	ATA	2	6	22701	22706	66.67 %	33.33 %	0 %	0 %	Non-Coding
38	NC_020820	ATG	2	6	22720	22725	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
39	NC_020820	ATT	2	6	22746	22751	33.33 %	66.67 %	0 %	0 %	Non-Coding
40	NC_020820	CAA	2	6	22985	22990	66.67 %	0 %	0 %	33.33 %	Non-Coding
41	NC_020820	TTA	2	6	24726	24731	33.33 %	66.67 %	0 %	0 %	Non-Coding
42	NC_020820	CGT	2	6	24739	24744	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
43	NC_020820	AGC	2	6	24804	24809	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
44	NC_020820	ACA	2	6	24930	24935	66.67 %	0 %	0 %	33.33 %	Non-Coding
45	NC_020820	TTA	2	6	25008	25013	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_020820	TAT	2	6	25211	25216	33.33 %	66.67 %	0 %	0 %	Non-Coding
47	NC_020820	CAC	2	6	28244	28249	33.33 %	0 %	0 %	66.67 %	Non-Coding
48	NC_020820	TCA	2	6	30170	30175	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
49	NC_020820	ATA	2	6	30427	30432	66.67 %	33.33 %	0 %	0 %	Non-Coding
50	NC_020820	CAA	2	6	30539	30544	66.67 %	0 %	0 %	33.33 %	Non-Coding
51	NC_020820	ATT	2	6	30615	30620	33.33 %	66.67 %	0 %	0 %	Non-Coding
52	NC_020820	TAG	2	6	30778	30783	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
53	NC_020820	GGA	2	6	30795	30800	33.33 %	0 %	66.67 %	0 %	Non-Coding
54	NC_020820	TAA	2	6	34687	34692	66.67 %	33.33 %	0 %	0 %	Non-Coding
55	NC_020820	ACT	2	6	34735	34740	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
56	NC_020820	ATA	2	6	34784	34789	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_020820	GTA	2	6	34853	34858	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
58	NC_020820	AGA	2	6	34981	34986	66.67 %	0 %	33.33 %	0 %	Non-Coding
59	NC_020820	TGA	2	6	35304	35309	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
60	NC_020820	TGT	2	6	35327	35332	0 %	66.67 %	33.33 %	0 %	Non-Coding
61	NC_020820	CTA	2	6	35337	35342	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
62	NC_020820	ATG	2	6	35344	35349	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
63	NC_020820	GTA	2	6	35409	35414	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
64	NC_020820	CTA	2	6	35490	35495	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
65	NC_020820	TAA	2	6	35889	35894	66.67 %	33.33 %	0 %	0 %	Non-Coding
66	NC_020820	TAA	2	6	40441	40446	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_020820	AAG	2	6	40745	40750	66.67 %	0 %	33.33 %	0 %	Non-Coding
68	NC_020820	AAT	2	6	40806	40811	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_020820	CAA	2	6	40914	40919	66.67 %	0 %	0 %	33.33 %	Non-Coding
70	NC_020820	GCC	2	6	40929	40934	0 %	0 %	33.33 %	66.67 %	Non-Coding
71	NC_020820	GAC	2	6	40961	40966	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
72	NC_020820	CTT	2	6	41037	41042	0 %	66.67 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.