MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Lactobacillus brevis KB290 DNA

Total Repeats: 66

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020819	TAAACT	2	12	10253	10264	50 %	33.33 %	0 %	16.67 %	Non-Coding
2	NC_020819	ATAGGT	2	12	40479	40490	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
3	NC_020819	TTTTAG	2	12	83312	83323	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
4	NC_020819	ATGAAA	2	12	89585	89596	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
5	NC_020819	TAACGT	2	12	187137	187148	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
6	NC_020819	ATAAAA	2	12	202678	202689	83.33 %	16.67 %	0 %	0 %	Non-Coding
7	NC_020819	TAATCA	2	12	288901	288912	50 %	33.33 %	0 %	16.67 %	Non-Coding
8	NC_020819	ATACGA	2	12	369438	369449	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
9	NC_020819	TTAGTG	2	12	381588	381599	16.67 %	50 %	33.33 %	0 %	Non-Coding
10	NC_020819	ATATGA	2	12	416986	416997	50 %	33.33 %	16.67 %	0 %	Non-Coding
11	NC_020819	TTAAAG	2	12	433636	433647	50 %	33.33 %	16.67 %	0 %	Non-Coding
12	NC_020819	TAGTCT	2	12	438248	438259	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
13	NC_020819	TTTAAT	2	12	492184	492195	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_020819	TGTTAA	2	12	516546	516557	33.33 %	50 %	16.67 %	0 %	Non-Coding
15	NC_020819	AGGCAT	2	12	533786	533797	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
16	NC_020819	GGTAAG	2	12	611953	611964	33.33 %	16.67 %	50 %	0 %	Non-Coding
17	NC_020819	TGAATT	2	12	657911	657922	33.33 %	50 %	16.67 %	0 %	Non-Coding
18	NC_020819	ACTTTG	2	12	671006	671017	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
19	NC_020819	TTCTCT	2	12	737275	737286	0 %	66.67 %	0 %	33.33 %	Non-Coding
20	NC_020819	TATAGT	2	12	752179	752190	33.33 %	50 %	16.67 %	0 %	Non-Coding
21	NC_020819	AGGGGA	2	12	783237	783248	33.33 %	0 %	66.67 %	0 %	Non-Coding
22	NC_020819	AAAAGA	2	12	829690	829701	83.33 %	0 %	16.67 %	0 %	Non-Coding
23	NC_020819	TTTAAA	2	12	858217	858228	50 %	50 %	0 %	0 %	Non-Coding
24	NC_020819	AGGTTA	2	12	891765	891776	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
25	NC_020819	TGGACT	2	12	925968	925979	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
26	NC_020819	TGGGGG	2	12	954301	954312	0 %	16.67 %	83.33 %	0 %	Non-Coding
27	NC_020819	TGACGA	2	12	997744	997755	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
28	NC_020819	TTAAAC	2	12	1147548	1147559	50 %	33.33 %	0 %	16.67 %	Non-Coding
29	NC_020819	ATTGGT	2	12	1160558	1160569	16.67 %	50 %	33.33 %	0 %	Non-Coding
30	NC_020819	TACTAG	2	12	1195484	1195495	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
31	NC_020819	TTACGC	2	12	1250636	1250647	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
32	NC_020819	CTTCGT	2	12	1273709	1273720	0 %	50 %	16.67 %	33.33 %	Non-Coding
33	NC_020819	TAAAAA	2	12	1276214	1276225	83.33 %	16.67 %	0 %	0 %	Non-Coding
34	NC_020819	AAAGCC	2	12	1285960	1285971	50 %	0 %	16.67 %	33.33 %	Non-Coding
35	NC_020819	ATAAAA	2	12	1313144	1313155	83.33 %	16.67 %	0 %	0 %	Non-Coding
36	NC_020819	GGAAAG	2	12	1347061	1347072	50 %	0 %	50 %	0 %	Non-Coding
37	NC_020819	AAAGTG	2	12	1456799	1456810	50 %	16.67 %	33.33 %	0 %	Non-Coding
38	NC_020819	AAAAGA	2	12	1584844	1584855	83.33 %	0 %	16.67 %	0 %	Non-Coding
39	NC_020819	TTAAAT	2	12	1618955	1618966	50 %	50 %	0 %	0 %	Non-Coding
40	NC_020819	GTTTTT	2	12	1676034	1676045	0 %	83.33 %	16.67 %	0 %	Non-Coding
41	NC_020819	CCCAAG	2	12	1688734	1688745	33.33 %	0 %	16.67 %	50 %	Non-Coding
42	NC_020819	CAACCA	2	12	1691076	1691087	50 %	0 %	0 %	50 %	Non-Coding
43	NC_020819	GAAACA	2	12	1719177	1719188	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
44	NC_020819	GTAACT	2	12	1750646	1750657	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
45	NC_020819	AAAATT	2	12	1778210	1778221	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_020819	AAATTA	2	12	1780091	1780102	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_020819	CATCCT	2	12	1838607	1838618	16.67 %	33.33 %	0 %	50 %	Non-Coding
48	NC_020819	AAAAAT	2	12	1950105	1950116	83.33 %	16.67 %	0 %	0 %	Non-Coding
49	NC_020819	GAAAAT	2	12	1954868	1954879	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
50	NC_020819	GATTCT	2	12	2046778	2046789	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
51	NC_020819	CCCTCA	2	12	2080392	2080403	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
52	NC_020819	AAATTT	2	12	2085068	2085079	50 %	50 %	0 %	0 %	Non-Coding
53	NC_020819	ACACCA	2	12	2106747	2106758	50 %	0 %	0 %	50 %	Non-Coding
54	NC_020819	ATTATG	2	12	2130730	2130741	33.33 %	50 %	16.67 %	0 %	Non-Coding
55	NC_020819	TCTTTC	2	12	2135481	2135492	0 %	66.67 %	0 %	33.33 %	Non-Coding
56	NC_020819	TTTTCT	2	12	2168850	2168861	0 %	83.33 %	0 %	16.67 %	Non-Coding
57	NC_020819	CAAGTA	2	12	2172787	2172798	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
58	NC_020819	TATGTG	2	12	2181806	2181817	16.67 %	50 %	33.33 %	0 %	Non-Coding
59	NC_020819	ATTTTT	2	12	2220224	2220235	16.67 %	83.33 %	0 %	0 %	Non-Coding
60	NC_020819	AAATGA	2	12	2258661	2258672	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
61	NC_020819	AATCTC	2	12	2272982	2272993	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
62	NC_020819	CATTCA	2	12	2279712	2279723	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
63	NC_020819	AACTGC	2	12	2287048	2287059	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
64	NC_020819	GCTGAT	2	12	2309428	2309439	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
65	NC_020819	CAGGAT	2	12	2336715	2336726	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
66	NC_020819	ACGGCA	2	12	2377270	2377281	33.33 %	0 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.