MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Ralstonia solanacearum FQY_4

Total Repeats: 170

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020799	GCCGGG	2	12	14878	14889	0 %	0 %	66.67 %	33.33 %	Non-Coding
2	NC_020799	ATTCAG	2	12	41208	41219	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
3	NC_020799	TTGCGC	2	12	69826	69837	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
4	NC_020799	GCCCAG	2	12	70026	70037	16.67 %	0 %	33.33 %	50 %	Non-Coding
5	NC_020799	TGCCCA	2	12	124943	124954	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
6	NC_020799	CCGGCG	2	12	135632	135643	0 %	0 %	50 %	50 %	Non-Coding
7	NC_020799	TTCCCC	2	12	172935	172946	0 %	33.33 %	0 %	66.67 %	Non-Coding
8	NC_020799	TGACCA	2	12	188959	188970	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
9	NC_020799	TTGGGA	2	12	207995	208006	16.67 %	33.33 %	50 %	0 %	Non-Coding
10	NC_020799	GAGCGA	2	12	210651	210662	33.33 %	0 %	50 %	16.67 %	Non-Coding
11	NC_020799	CGTTGC	2	12	279067	279078	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
12	NC_020799	CGTTTC	2	12	285455	285466	0 %	50 %	16.67 %	33.33 %	Non-Coding
13	NC_020799	AGGGCA	2	12	314521	314532	33.33 %	0 %	50 %	16.67 %	Non-Coding
14	NC_020799	CCCGGA	2	12	326917	326928	16.67 %	0 %	33.33 %	50 %	Non-Coding
15	NC_020799	GGGATG	2	12	330250	330261	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
16	NC_020799	GCGCCG	2	12	348138	348149	0 %	0 %	50 %	50 %	Non-Coding
17	NC_020799	CGGCGC	2	12	354633	354644	0 %	0 %	50 %	50 %	Non-Coding
18	NC_020799	GCCGTG	2	12	367579	367590	0 %	16.67 %	50 %	33.33 %	Non-Coding
19	NC_020799	TTGCCG	2	12	392862	392873	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
20	NC_020799	ATCGGC	2	12	395816	395827	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
21	NC_020799	CCACGC	2	12	493369	493380	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
22	NC_020799	TGCCGC	2	12	506685	506696	0 %	16.67 %	33.33 %	50 %	Non-Coding
23	NC_020799	AGGAAG	2	12	522185	522196	50 %	0 %	50 %	0 %	Non-Coding
24	NC_020799	GCCTGC	2	12	523799	523810	0 %	16.67 %	33.33 %	50 %	Non-Coding
25	NC_020799	CGGCCG	2	12	552568	552579	0 %	0 %	50 %	50 %	Non-Coding
26	NC_020799	ACGCGA	2	12	582971	582982	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
27	NC_020799	CGATCA	2	12	616507	616518	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
28	NC_020799	GGCCCG	2	12	618138	618149	0 %	0 %	50 %	50 %	Non-Coding
29	NC_020799	ACAGAC	2	12	626090	626101	50 %	0 %	16.67 %	33.33 %	Non-Coding
30	NC_020799	TTTGGA	2	12	645716	645727	16.67 %	50 %	33.33 %	0 %	Non-Coding
31	NC_020799	TAGGAG	2	12	654334	654345	33.33 %	16.67 %	50 %	0 %	Non-Coding
32	NC_020799	GCAAGC	3	18	659057	659074	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
33	NC_020799	ATTTCG	2	12	668701	668712	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
34	NC_020799	CCGCAA	2	12	671717	671728	33.33 %	0 %	16.67 %	50 %	Non-Coding
35	NC_020799	TTCGAA	2	12	676640	676651	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
36	NC_020799	GCTTCA	2	12	680198	680209	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
37	NC_020799	TTTCTG	2	12	682186	682197	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
38	NC_020799	GCCCCC	2	12	701399	701410	0 %	0 %	16.67 %	83.33 %	Non-Coding
39	NC_020799	CGGGCG	2	12	726412	726423	0 %	0 %	66.67 %	33.33 %	Non-Coding
40	NC_020799	TCCGCC	2	12	729681	729692	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
41	NC_020799	GGCGCC	2	12	732685	732696	0 %	0 %	50 %	50 %	Non-Coding
42	NC_020799	CGGGGG	2	12	808767	808778	0 %	0 %	83.33 %	16.67 %	Non-Coding
43	NC_020799	GCAGGC	2	12	840949	840960	16.67 %	0 %	50 %	33.33 %	Non-Coding
44	NC_020799	TCTTCA	2	12	847585	847596	16.67 %	50 %	0 %	33.33 %	Non-Coding
45	NC_020799	TGCCAT	2	12	849820	849831	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
46	NC_020799	GCGTGC	2	12	850582	850593	0 %	16.67 %	50 %	33.33 %	Non-Coding
47	NC_020799	TAATAT	2	12	851620	851631	50 %	50 %	0 %	0 %	Non-Coding
48	NC_020799	CGAAGA	2	12	852672	852683	50 %	0 %	33.33 %	16.67 %	Non-Coding
49	NC_020799	CAGGCC	2	12	872664	872675	16.67 %	0 %	33.33 %	50 %	Non-Coding
50	NC_020799	ATAAAA	2	12	887467	887478	83.33 %	16.67 %	0 %	0 %	Non-Coding
51	NC_020799	CGTGGC	2	12	900644	900655	0 %	16.67 %	50 %	33.33 %	Non-Coding
52	NC_020799	CCGAGG	2	12	935218	935229	16.67 %	0 %	50 %	33.33 %	Non-Coding
53	NC_020799	CGGGCA	2	12	1018040	1018051	16.67 %	0 %	50 %	33.33 %	Non-Coding
54	NC_020799	GCTCCG	2	12	1047897	1047908	0 %	16.67 %	33.33 %	50 %	Non-Coding
55	NC_020799	GCCGCG	2	12	1075261	1075272	0 %	0 %	50 %	50 %	Non-Coding
56	NC_020799	CTTCGT	2	12	1098990	1099001	0 %	50 %	16.67 %	33.33 %	Non-Coding
57	NC_020799	CGACCG	2	12	1112672	1112683	16.67 %	0 %	33.33 %	50 %	Non-Coding
58	NC_020799	TTTGAC	2	12	1116326	1116337	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
59	NC_020799	CCCGCG	2	12	1122217	1122228	0 %	0 %	33.33 %	66.67 %	Non-Coding
60	NC_020799	CCGCGT	2	12	1131282	1131293	0 %	16.67 %	33.33 %	50 %	Non-Coding
61	NC_020799	GCATTG	2	12	1142334	1142345	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
62	NC_020799	CGATGA	2	12	1171610	1171621	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
63	NC_020799	GCGCGG	2	12	1172103	1172114	0 %	0 %	66.67 %	33.33 %	Non-Coding
64	NC_020799	TTTACG	2	12	1201953	1201964	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
65	NC_020799	TACGGC	2	12	1249418	1249429	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
66	NC_020799	GAGCGT	2	12	1252676	1252687	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
67	NC_020799	GCGCCC	2	12	1305285	1305296	0 %	0 %	33.33 %	66.67 %	Non-Coding
68	NC_020799	GTCCAT	2	12	1317601	1317612	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
69	NC_020799	GATTGG	2	12	1342437	1342448	16.67 %	33.33 %	50 %	0 %	Non-Coding
70	NC_020799	AGCGAA	2	12	1437056	1437067	50 %	0 %	33.33 %	16.67 %	Non-Coding
71	NC_020799	ACGAGC	5	30	1491824	1491853	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
72	NC_020799	GCATCC	2	12	1567273	1567284	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
73	NC_020799	GCCCGC	2	12	1577096	1577107	0 %	0 %	33.33 %	66.67 %	Non-Coding
74	NC_020799	GCACCC	2	12	1589036	1589047	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
75	NC_020799	GCAAGA	2	12	1595021	1595032	50 %	0 %	33.33 %	16.67 %	Non-Coding
76	NC_020799	CGATGT	2	12	1620021	1620032	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
77	NC_020799	GCGCGG	2	12	1620072	1620083	0 %	0 %	66.67 %	33.33 %	Non-Coding
78	NC_020799	TGACCT	2	12	1667520	1667531	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
79	NC_020799	ATTATC	2	12	1667810	1667821	33.33 %	50 %	0 %	16.67 %	Non-Coding
80	NC_020799	GCCCCG	2	12	1707751	1707762	0 %	0 %	33.33 %	66.67 %	Non-Coding
81	NC_020799	TGCGAT	2	12	1731685	1731696	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
82	NC_020799	CGTTGT	2	12	1785546	1785557	0 %	50 %	33.33 %	16.67 %	Non-Coding
83	NC_020799	GCCCAG	2	12	1788798	1788809	16.67 %	0 %	33.33 %	50 %	Non-Coding
84	NC_020799	GCCAAA	2	12	1790570	1790581	50 %	0 %	16.67 %	33.33 %	Non-Coding
85	NC_020799	AAAGAA	2	12	1799330	1799341	83.33 %	0 %	16.67 %	0 %	Non-Coding
86	NC_020799	ACTGCC	2	12	1853450	1853461	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
87	NC_020799	GCCGTT	2	12	1904866	1904877	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
88	NC_020799	GGCGCC	2	12	1912575	1912586	0 %	0 %	50 %	50 %	Non-Coding
89	NC_020799	TCCGCT	2	12	1948763	1948774	0 %	33.33 %	16.67 %	50 %	Non-Coding
90	NC_020799	CAGAAA	2	12	1950013	1950024	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
91	NC_020799	CTCGGT	2	12	1958611	1958622	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
92	NC_020799	GCACTG	2	12	1965268	1965279	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
93	NC_020799	GGCGCG	2	12	1969999	1970010	0 %	0 %	66.67 %	33.33 %	Non-Coding
94	NC_020799	AACCCG	2	12	1981336	1981347	33.33 %	0 %	16.67 %	50 %	Non-Coding
95	NC_020799	GTCCCT	2	12	2061667	2061678	0 %	33.33 %	16.67 %	50 %	Non-Coding
96	NC_020799	TTTTTC	2	12	2062335	2062346	0 %	83.33 %	0 %	16.67 %	Non-Coding
97	NC_020799	ATGCCG	2	12	2143779	2143790	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
98	NC_020799	GCGCGG	2	12	2156792	2156803	0 %	0 %	66.67 %	33.33 %	Non-Coding
99	NC_020799	TCGGGA	2	12	2178325	2178336	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
100	NC_020799	CCGCCC	2	12	2196381	2196392	0 %	0 %	16.67 %	83.33 %	Non-Coding
101	NC_020799	GCTGGT	2	12	2197744	2197755	0 %	33.33 %	50 %	16.67 %	Non-Coding
102	NC_020799	CTTCCC	2	12	2215378	2215389	0 %	33.33 %	0 %	66.67 %	Non-Coding
103	NC_020799	GCCGGC	2	12	2257633	2257644	0 %	0 %	50 %	50 %	Non-Coding
104	NC_020799	ACCGCT	2	12	2288358	2288369	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
105	NC_020799	GGATCG	2	12	2296923	2296934	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
106	NC_020799	CGAGCG	2	12	2309665	2309676	16.67 %	0 %	50 %	33.33 %	Non-Coding
107	NC_020799	CTTCAC	2	12	2343880	2343891	16.67 %	33.33 %	0 %	50 %	Non-Coding
108	NC_020799	CACGGA	2	12	2376045	2376056	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
109	NC_020799	CCCCCT	2	12	2390294	2390305	0 %	16.67 %	0 %	83.33 %	Non-Coding
110	NC_020799	CCGGCC	2	12	2392111	2392122	0 %	0 %	33.33 %	66.67 %	Non-Coding
111	NC_020799	CCCCCT	2	12	2451626	2451637	0 %	16.67 %	0 %	83.33 %	Non-Coding
112	NC_020799	GCCGAT	2	12	2458132	2458143	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
113	NC_020799	CCGGCC	2	12	2469452	2469463	0 %	0 %	33.33 %	66.67 %	Non-Coding
114	NC_020799	CCCTCA	2	12	2474567	2474578	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
115	NC_020799	GGCGCG	2	12	2477053	2477064	0 %	0 %	66.67 %	33.33 %	Non-Coding
116	NC_020799	TGACGA	2	12	2490162	2490173	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
117	NC_020799	CCGGCC	2	12	2535735	2535746	0 %	0 %	33.33 %	66.67 %	Non-Coding
118	NC_020799	ACCGGG	2	12	2660714	2660725	16.67 %	0 %	50 %	33.33 %	Non-Coding
119	NC_020799	TGACGT	2	12	2665408	2665419	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
120	NC_020799	GTTCTT	2	12	2685142	2685153	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
121	NC_020799	GCAAAA	2	12	2688744	2688755	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
122	NC_020799	CCACCT	2	12	2727935	2727946	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
123	NC_020799	AGCACG	2	12	2782763	2782774	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
124	NC_020799	ACTTCC	2	12	2799800	2799811	16.67 %	33.33 %	0 %	50 %	Non-Coding
125	NC_020799	ACCGAG	2	12	2800522	2800533	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
126	NC_020799	GCGCGG	2	12	2807605	2807616	0 %	0 %	66.67 %	33.33 %	Non-Coding
127	NC_020799	ACCGGC	2	12	2821098	2821109	16.67 %	0 %	33.33 %	50 %	Non-Coding
128	NC_020799	CGGCGC	2	12	2848408	2848419	0 %	0 %	50 %	50 %	Non-Coding
129	NC_020799	AAACAG	2	12	2849841	2849852	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
130	NC_020799	ATGACG	2	12	2856061	2856072	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
131	NC_020799	CCTCCA	2	12	2895300	2895311	16.67 %	16.67 %	0 %	66.67 %	Non-Coding
132	NC_020799	CGGCAT	2	12	2897100	2897111	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
133	NC_020799	TCAACG	2	12	2904781	2904792	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
134	NC_020799	CCCCTG	2	12	2907624	2907635	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
135	NC_020799	CCTGGC	2	12	3008513	3008524	0 %	16.67 %	33.33 %	50 %	Non-Coding
136	NC_020799	CCCCGA	2	12	3029574	3029585	16.67 %	0 %	16.67 %	66.67 %	Non-Coding
137	NC_020799	CGGATG	2	12	3068779	3068790	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
138	NC_020799	GCCAGT	2	12	3077455	3077466	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
139	NC_020799	AAAACG	2	12	3101778	3101789	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
140	NC_020799	CAAACC	2	12	3107570	3107581	50 %	0 %	0 %	50 %	Non-Coding
141	NC_020799	GACCCG	2	12	3120673	3120684	16.67 %	0 %	33.33 %	50 %	Non-Coding
142	NC_020799	CGCCGA	2	12	3152695	3152706	16.67 %	0 %	33.33 %	50 %	Non-Coding
143	NC_020799	CGCGCC	2	12	3160453	3160464	0 %	0 %	33.33 %	66.67 %	Non-Coding
144	NC_020799	GCTTTC	2	12	3223044	3223055	0 %	50 %	16.67 %	33.33 %	Non-Coding
145	NC_020799	CGCACG	2	12	3240777	3240788	16.67 %	0 %	33.33 %	50 %	Non-Coding
146	NC_020799	GGCCTT	2	12	3269369	3269380	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
147	NC_020799	GGAGAG	2	12	3277881	3277892	33.33 %	0 %	66.67 %	0 %	Non-Coding
148	NC_020799	GGTGAG	2	12	3308091	3308102	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
149	NC_020799	GCGTGC	2	12	3308321	3308332	0 %	16.67 %	50 %	33.33 %	Non-Coding
150	NC_020799	GACAGC	3	18	3310936	3310953	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
151	NC_020799	TCTCAT	2	12	3362299	3362310	16.67 %	50 %	0 %	33.33 %	Non-Coding
152	NC_020799	GCCTGC	2	12	3380762	3380773	0 %	16.67 %	33.33 %	50 %	Non-Coding
153	NC_020799	GCGGAT	2	12	3382956	3382967	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
154	NC_020799	CTCCGC	2	12	3479616	3479627	0 %	16.67 %	16.67 %	66.67 %	Non-Coding
155	NC_020799	CGGCGC	2	12	3520013	3520024	0 %	0 %	50 %	50 %	Non-Coding
156	NC_020799	AGGGCA	2	12	3531205	3531216	33.33 %	0 %	50 %	16.67 %	Non-Coding
157	NC_020799	TGCGCG	2	12	3538892	3538903	0 %	16.67 %	50 %	33.33 %	Non-Coding
158	NC_020799	CATCCT	2	12	3545191	3545202	16.67 %	33.33 %	0 %	50 %	Non-Coding
159	NC_020799	TCACAA	2	12	3623462	3623473	50 %	16.67 %	0 %	33.33 %	Non-Coding
160	NC_020799	CGAGGA	2	12	3624963	3624974	33.33 %	0 %	50 %	16.67 %	Non-Coding
161	NC_020799	TATTTG	2	12	3624997	3625008	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
162	NC_020799	CGGGCG	2	12	3633967	3633978	0 %	0 %	66.67 %	33.33 %	Non-Coding
163	NC_020799	GTAGGT	2	12	3635572	3635583	16.67 %	33.33 %	50 %	0 %	Non-Coding
164	NC_020799	GCGCCG	2	12	3656009	3656020	0 %	0 %	50 %	50 %	Non-Coding
165	NC_020799	GCCTGC	2	12	3656031	3656042	0 %	16.67 %	33.33 %	50 %	Non-Coding
166	NC_020799	GCTGGC	2	12	3656575	3656586	0 %	16.67 %	50 %	33.33 %	Non-Coding
167	NC_020799	GGCCTG	2	12	3657308	3657319	0 %	16.67 %	50 %	33.33 %	Non-Coding
168	NC_020799	GGTGGC	2	12	3666005	3666016	0 %	16.67 %	66.67 %	16.67 %	Non-Coding
169	NC_020799	GCCCTT	2	12	3677826	3677837	0 %	33.33 %	16.67 %	50 %	Non-Coding
170	NC_020799	GCCGGG	2	12	3677840	3677851	0 %	0 %	66.67 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.