MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Xanthomonas axonopodis Xac29-1 plasmid pXAC47

Total Repeats: 116

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020798	CGG	2	6	50	55	0 %	0 %	66.67 %	33.33 %	Non-Coding
2	NC_020798	GCG	2	6	109	114	0 %	0 %	66.67 %	33.33 %	Non-Coding
3	NC_020798	CCG	2	6	142	147	0 %	0 %	33.33 %	66.67 %	Non-Coding
4	NC_020798	GCT	2	6	155	160	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5	NC_020798	TGC	2	6	187	192	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6	NC_020798	CCG	2	6	224	229	0 %	0 %	33.33 %	66.67 %	Non-Coding
7	NC_020798	GGC	2	6	232	237	0 %	0 %	66.67 %	33.33 %	Non-Coding
8	NC_020798	GCG	2	6	321	326	0 %	0 %	66.67 %	33.33 %	Non-Coding
9	NC_020798	CCA	2	6	331	336	33.33 %	0 %	0 %	66.67 %	Non-Coding
10	NC_020798	CCG	2	6	453	458	0 %	0 %	33.33 %	66.67 %	Non-Coding
11	NC_020798	AGC	2	6	486	491	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
12	NC_020798	GCA	2	6	526	531	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13	NC_020798	TGC	2	6	534	539	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
14	NC_020798	GCG	2	6	552	557	0 %	0 %	66.67 %	33.33 %	Non-Coding
15	NC_020798	GCG	2	6	685	690	0 %	0 %	66.67 %	33.33 %	Non-Coding
16	NC_020798	CAG	2	6	702	707	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
17	NC_020798	ACG	2	6	1300	1305	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
18	NC_020798	CTT	2	6	1329	1334	0 %	66.67 %	0 %	33.33 %	Non-Coding
19	NC_020798	AAC	2	6	1355	1360	66.67 %	0 %	0 %	33.33 %	Non-Coding
20	NC_020798	TGA	2	6	1385	1390	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
21	NC_020798	CTG	2	6	1398	1403	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
22	NC_020798	GCC	2	6	1425	1430	0 %	0 %	33.33 %	66.67 %	Non-Coding
23	NC_020798	GTG	2	6	1456	1461	0 %	33.33 %	66.67 %	0 %	Non-Coding
24	NC_020798	AGC	2	6	1531	1536	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
25	NC_020798	TGC	2	6	2013	2018	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
26	NC_020798	CGG	2	6	2155	2160	0 %	0 %	66.67 %	33.33 %	Non-Coding
27	NC_020798	CCG	2	6	2260	2265	0 %	0 %	33.33 %	66.67 %	Non-Coding
28	NC_020798	GCG	2	6	2266	2271	0 %	0 %	66.67 %	33.33 %	Non-Coding
29	NC_020798	CGA	2	6	2276	2281	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
30	NC_020798	CGC	2	6	2373	2378	0 %	0 %	33.33 %	66.67 %	Non-Coding
31	NC_020798	GCC	2	6	2470	2475	0 %	0 %	33.33 %	66.67 %	Non-Coding
32	NC_020798	CGC	2	6	2554	2559	0 %	0 %	33.33 %	66.67 %	Non-Coding
33	NC_020798	CGC	2	6	2579	2584	0 %	0 %	33.33 %	66.67 %	Non-Coding
34	NC_020798	GCC	2	6	2646	2651	0 %	0 %	33.33 %	66.67 %	Non-Coding
35	NC_020798	CCA	2	6	2668	2673	33.33 %	0 %	0 %	66.67 %	Non-Coding
36	NC_020798	TGC	2	6	2818	2823	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
37	NC_020798	ACA	2	6	3030	3035	66.67 %	0 %	0 %	33.33 %	Non-Coding
38	NC_020798	AGG	2	6	4057	4062	33.33 %	0 %	66.67 %	0 %	Non-Coding
39	NC_020798	ACC	2	6	4271	4276	33.33 %	0 %	0 %	66.67 %	Non-Coding
40	NC_020798	CGA	2	6	4309	4314	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
41	NC_020798	GAC	2	6	4690	4695	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
42	NC_020798	GAT	2	6	5021	5026	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
43	NC_020798	GCT	2	6	5030	5035	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
44	NC_020798	GCT	2	6	5094	5099	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
45	NC_020798	CCG	2	6	5210	5215	0 %	0 %	33.33 %	66.67 %	Non-Coding
46	NC_020798	GGC	2	6	6214	6219	0 %	0 %	66.67 %	33.33 %	Non-Coding
47	NC_020798	CAG	2	6	6378	6383	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
48	NC_020798	CGC	3	9	6392	6400	0 %	0 %	33.33 %	66.67 %	Non-Coding
49	NC_020798	CGA	2	6	6408	6413	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
50	NC_020798	TGC	2	6	6476	6481	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51	NC_020798	CGG	3	9	6504	6512	0 %	0 %	66.67 %	33.33 %	Non-Coding
52	NC_020798	CCT	2	6	6516	6521	0 %	33.33 %	0 %	66.67 %	Non-Coding
53	NC_020798	CAG	2	6	6541	6546	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
54	NC_020798	GAG	2	6	6567	6572	33.33 %	0 %	66.67 %	0 %	Non-Coding
55	NC_020798	AAC	2	6	6719	6724	66.67 %	0 %	0 %	33.33 %	Non-Coding
56	NC_020798	GTG	2	6	6750	6755	0 %	33.33 %	66.67 %	0 %	Non-Coding
57	NC_020798	TCG	2	6	7419	7424	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
58	NC_020798	GAA	2	6	7435	7440	66.67 %	0 %	33.33 %	0 %	Non-Coding
59	NC_020798	GCC	2	6	7526	7531	0 %	0 %	33.33 %	66.67 %	Non-Coding
60	NC_020798	CGC	2	6	10279	10284	0 %	0 %	33.33 %	66.67 %	Non-Coding
61	NC_020798	GCC	2	6	10546	10551	0 %	0 %	33.33 %	66.67 %	Non-Coding
62	NC_020798	GCG	2	6	10574	10579	0 %	0 %	66.67 %	33.33 %	Non-Coding
63	NC_020798	GAG	2	6	10599	10604	33.33 %	0 %	66.67 %	0 %	Non-Coding
64	NC_020798	ACT	2	6	12521	12526	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
65	NC_020798	TCC	2	6	13144	13149	0 %	33.33 %	0 %	66.67 %	Non-Coding
66	NC_020798	CGA	2	6	13705	13710	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
67	NC_020798	TGG	3	9	13870	13878	0 %	33.33 %	66.67 %	0 %	Non-Coding
68	NC_020798	AAC	2	6	13919	13924	66.67 %	0 %	0 %	33.33 %	Non-Coding
69	NC_020798	GCC	2	6	19136	19141	0 %	0 %	33.33 %	66.67 %	Non-Coding
70	NC_020798	TGA	2	6	19191	19196	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
71	NC_020798	CGA	2	6	19260	19265	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
72	NC_020798	GAC	2	6	20312	20317	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
73	NC_020798	CCA	2	6	20336	20341	33.33 %	0 %	0 %	66.67 %	Non-Coding
74	NC_020798	GCC	2	6	21489	21494	0 %	0 %	33.33 %	66.67 %	Non-Coding
75	NC_020798	GCC	2	6	23416	23421	0 %	0 %	33.33 %	66.67 %	Non-Coding
76	NC_020798	AGC	2	6	24780	24785	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
77	NC_020798	AGA	2	6	24796	24801	66.67 %	0 %	33.33 %	0 %	Non-Coding
78	NC_020798	GTG	2	6	24802	24807	0 %	33.33 %	66.67 %	0 %	Non-Coding
79	NC_020798	CAC	2	6	25618	25623	33.33 %	0 %	0 %	66.67 %	Non-Coding
80	NC_020798	TGT	2	6	28955	28960	0 %	66.67 %	33.33 %	0 %	Non-Coding
81	NC_020798	TTG	2	6	32278	32283	0 %	66.67 %	33.33 %	0 %	Non-Coding
82	NC_020798	ATA	2	6	32296	32301	66.67 %	33.33 %	0 %	0 %	Non-Coding
83	NC_020798	CAT	2	6	32868	32873	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
84	NC_020798	CGG	2	6	33048	33053	0 %	0 %	66.67 %	33.33 %	Non-Coding
85	NC_020798	CGC	2	6	33255	33260	0 %	0 %	33.33 %	66.67 %	Non-Coding
86	NC_020798	GTC	2	6	33295	33300	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
87	NC_020798	GCG	2	6	33324	33329	0 %	0 %	66.67 %	33.33 %	Non-Coding
88	NC_020798	GGC	2	6	33343	33348	0 %	0 %	66.67 %	33.33 %	Non-Coding
89	NC_020798	CGG	2	6	33436	33441	0 %	0 %	66.67 %	33.33 %	Non-Coding
90	NC_020798	GAC	2	6	33459	33464	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
91	NC_020798	CGG	2	6	33479	33484	0 %	0 %	66.67 %	33.33 %	Non-Coding
92	NC_020798	CGG	2	6	33513	33518	0 %	0 %	66.67 %	33.33 %	Non-Coding
93	NC_020798	CGA	3	9	33625	33633	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
94	NC_020798	CGC	2	6	33726	33731	0 %	0 %	33.33 %	66.67 %	Non-Coding
95	NC_020798	ACC	2	6	33741	33746	33.33 %	0 %	0 %	66.67 %	Non-Coding
96	NC_020798	GCC	2	6	33781	33786	0 %	0 %	33.33 %	66.67 %	Non-Coding
97	NC_020798	GCC	2	6	33909	33914	0 %	0 %	33.33 %	66.67 %	Non-Coding
98	NC_020798	CCA	2	6	33931	33936	33.33 %	0 %	0 %	66.67 %	Non-Coding
99	NC_020798	TGC	2	6	34081	34086	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
100	NC_020798	ACA	2	6	34293	34298	66.67 %	0 %	0 %	33.33 %	Non-Coding
101	NC_020798	ATT	2	6	35402	35407	33.33 %	66.67 %	0 %	0 %	Non-Coding
102	NC_020798	CGC	2	6	35411	35416	0 %	0 %	33.33 %	66.67 %	Non-Coding
103	NC_020798	CCA	2	6	35492	35497	33.33 %	0 %	0 %	66.67 %	Non-Coding
104	NC_020798	GAC	2	6	36723	36728	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
105	NC_020798	CCG	2	6	36778	36783	0 %	0 %	33.33 %	66.67 %	Non-Coding
106	NC_020798	GAC	2	6	38546	38551	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
107	NC_020798	TAA	2	6	40032	40037	66.67 %	33.33 %	0 %	0 %	Non-Coding
108	NC_020798	TTG	2	6	40077	40082	0 %	66.67 %	33.33 %	0 %	Non-Coding
109	NC_020798	CTG	2	6	44832	44837	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
110	NC_020798	AAG	2	6	44851	44856	66.67 %	0 %	33.33 %	0 %	Non-Coding
111	NC_020798	GCC	2	6	46035	46040	0 %	0 %	33.33 %	66.67 %	Non-Coding
112	NC_020798	GCG	2	6	46866	46871	0 %	0 %	66.67 %	33.33 %	Non-Coding
113	NC_020798	GAG	2	6	46919	46924	33.33 %	0 %	66.67 %	0 %	Non-Coding
114	NC_020798	GAC	2	6	46970	46975	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
115	NC_020798	GAA	2	6	46992	46997	66.67 %	0 %	33.33 %	0 %	Non-Coding
116	NC_020798	CGC	2	6	47048	47053	0 %	0 %	33.33 %	66.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.