MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Sphingomonas sp. MM-1 plasmid pISP2

Total Repeats: 102

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020543	TCG	2	6	2116	2121	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2	NC_020543	GCG	2	6	2138	2143	0 %	0 %	66.67 %	33.33 %	Non-Coding
3	NC_020543	GCG	2	6	2166	2171	0 %	0 %	66.67 %	33.33 %	Non-Coding
4	NC_020543	GCC	2	6	5161	5166	0 %	0 %	33.33 %	66.67 %	Non-Coding
5	NC_020543	GCC	2	6	5212	5217	0 %	0 %	33.33 %	66.67 %	Non-Coding
6	NC_020543	GCG	2	6	5235	5240	0 %	0 %	66.67 %	33.33 %	Non-Coding
7	NC_020543	ATG	2	6	5686	5691	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8	NC_020543	GCT	2	6	7225	7230	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9	NC_020543	GCG	2	6	7248	7253	0 %	0 %	66.67 %	33.33 %	Non-Coding
10	NC_020543	GCC	2	6	7282	7287	0 %	0 %	33.33 %	66.67 %	Non-Coding
11	NC_020543	GCC	2	6	8170	8175	0 %	0 %	33.33 %	66.67 %	Non-Coding
12	NC_020543	CCG	2	6	8194	8199	0 %	0 %	33.33 %	66.67 %	Non-Coding
13	NC_020543	ACG	2	6	8234	8239	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
14	NC_020543	CGA	2	6	8294	8299	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
15	NC_020543	GAA	2	6	11601	11606	66.67 %	0 %	33.33 %	0 %	Non-Coding
16	NC_020543	AGA	2	6	11629	11634	66.67 %	0 %	33.33 %	0 %	Non-Coding
17	NC_020543	TCA	2	6	11680	11685	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
18	NC_020543	ATC	2	6	11692	11697	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19	NC_020543	TTC	2	6	11712	11717	0 %	66.67 %	0 %	33.33 %	Non-Coding
20	NC_020543	GCC	2	6	11826	11831	0 %	0 %	33.33 %	66.67 %	Non-Coding
21	NC_020543	CGG	2	6	14019	14024	0 %	0 %	66.67 %	33.33 %	Non-Coding
22	NC_020543	TGG	2	6	14039	14044	0 %	33.33 %	66.67 %	0 %	Non-Coding
23	NC_020543	GGA	2	6	14080	14085	33.33 %	0 %	66.67 %	0 %	Non-Coding
24	NC_020543	CCA	2	6	14879	14884	33.33 %	0 %	0 %	66.67 %	Non-Coding
25	NC_020543	CTG	2	6	14918	14923	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
26	NC_020543	TCG	2	6	14929	14934	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
27	NC_020543	GCC	2	6	15495	15500	0 %	0 %	33.33 %	66.67 %	Non-Coding
28	NC_020543	GTT	2	6	15505	15510	0 %	66.67 %	33.33 %	0 %	Non-Coding
29	NC_020543	CTG	2	6	15607	15612	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
30	NC_020543	GCG	2	6	15673	15678	0 %	0 %	66.67 %	33.33 %	Non-Coding
31	NC_020543	AGG	2	6	15741	15746	33.33 %	0 %	66.67 %	0 %	Non-Coding
32	NC_020543	GGA	2	6	16378	16383	33.33 %	0 %	66.67 %	0 %	Non-Coding
33	NC_020543	TTG	2	6	17359	17364	0 %	66.67 %	33.33 %	0 %	Non-Coding
34	NC_020543	CGG	2	6	17366	17371	0 %	0 %	66.67 %	33.33 %	Non-Coding
35	NC_020543	ACC	2	6	17397	17402	33.33 %	0 %	0 %	66.67 %	Non-Coding
36	NC_020543	GAT	2	6	17405	17410	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
37	NC_020543	CGG	2	6	18599	18604	0 %	0 %	66.67 %	33.33 %	Non-Coding
38	NC_020543	GTC	2	6	20391	20396	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
39	NC_020543	AAG	2	6	21782	21787	66.67 %	0 %	33.33 %	0 %	Non-Coding
40	NC_020543	GAA	2	6	23875	23880	66.67 %	0 %	33.33 %	0 %	Non-Coding
41	NC_020543	AGC	2	6	23889	23894	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
42	NC_020543	CGC	2	6	23907	23912	0 %	0 %	33.33 %	66.67 %	Non-Coding
43	NC_020543	ACC	2	6	24599	24604	33.33 %	0 %	0 %	66.67 %	Non-Coding
44	NC_020543	TTC	2	6	24672	24677	0 %	66.67 %	0 %	33.33 %	Non-Coding
45	NC_020543	CGC	3	9	24772	24780	0 %	0 %	33.33 %	66.67 %	Non-Coding
46	NC_020543	CGG	2	6	24818	24823	0 %	0 %	66.67 %	33.33 %	Non-Coding
47	NC_020543	CCG	3	9	24857	24865	0 %	0 %	33.33 %	66.67 %	Non-Coding
48	NC_020543	GCG	2	6	25648	25653	0 %	0 %	66.67 %	33.33 %	Non-Coding
49	NC_020543	GCC	2	6	25667	25672	0 %	0 %	33.33 %	66.67 %	Non-Coding
50	NC_020543	TCA	2	6	25793	25798	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
51	NC_020543	CGG	2	6	25897	25902	0 %	0 %	66.67 %	33.33 %	Non-Coding
52	NC_020543	GTC	2	6	27003	27008	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
53	NC_020543	CAA	2	6	27051	27056	66.67 %	0 %	0 %	33.33 %	Non-Coding
54	NC_020543	AGG	2	6	27190	27195	33.33 %	0 %	66.67 %	0 %	Non-Coding
55	NC_020543	GCC	2	6	36241	36246	0 %	0 %	33.33 %	66.67 %	Non-Coding
56	NC_020543	CTT	2	6	36268	36273	0 %	66.67 %	0 %	33.33 %	Non-Coding
57	NC_020543	TCT	2	6	36332	36337	0 %	66.67 %	0 %	33.33 %	Non-Coding
58	NC_020543	GTG	2	6	36395	36400	0 %	33.33 %	66.67 %	0 %	Non-Coding
59	NC_020543	GGA	2	6	36495	36500	33.33 %	0 %	66.67 %	0 %	Non-Coding
60	NC_020543	CAG	2	6	36645	36650	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
61	NC_020543	CCT	2	6	36664	36669	0 %	33.33 %	0 %	66.67 %	Non-Coding
62	NC_020543	CGG	2	6	36693	36698	0 %	0 %	66.67 %	33.33 %	Non-Coding
63	NC_020543	GCG	2	6	36707	36712	0 %	0 %	66.67 %	33.33 %	Non-Coding
64	NC_020543	GAG	2	6	39373	39378	33.33 %	0 %	66.67 %	0 %	Non-Coding
65	NC_020543	GGC	2	6	39442	39447	0 %	0 %	66.67 %	33.33 %	Non-Coding
66	NC_020543	GGC	2	6	39514	39519	0 %	0 %	66.67 %	33.33 %	Non-Coding
67	NC_020543	GCT	2	6	39566	39571	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
68	NC_020543	CGG	2	6	39594	39599	0 %	0 %	66.67 %	33.33 %	Non-Coding
69	NC_020543	GTC	2	6	41231	41236	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
70	NC_020543	CAG	2	6	41257	41262	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
71	NC_020543	GCA	2	6	41297	41302	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
72	NC_020543	GCG	2	6	41308	41313	0 %	0 %	66.67 %	33.33 %	Non-Coding
73	NC_020543	TTA	2	6	41332	41337	33.33 %	66.67 %	0 %	0 %	Non-Coding
74	NC_020543	CTG	2	6	41344	41349	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
75	NC_020543	CAT	2	6	41691	41696	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
76	NC_020543	GAT	2	6	41751	41756	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
77	NC_020543	ATA	2	6	41848	41853	66.67 %	33.33 %	0 %	0 %	Non-Coding
78	NC_020543	ACC	2	6	41936	41941	33.33 %	0 %	0 %	66.67 %	Non-Coding
79	NC_020543	CAT	2	6	41962	41967	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
80	NC_020543	CAG	2	6	42029	42034	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
81	NC_020543	TCG	2	6	42135	42140	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
82	NC_020543	AGG	2	6	42179	42184	33.33 %	0 %	66.67 %	0 %	Non-Coding
83	NC_020543	ATT	2	6	43575	43580	33.33 %	66.67 %	0 %	0 %	Non-Coding
84	NC_020543	TGA	2	6	47287	47292	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
85	NC_020543	CGA	2	6	47318	47323	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
86	NC_020543	CGA	2	6	47339	47344	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
87	NC_020543	CGA	2	6	47384	47389	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
88	NC_020543	CAT	2	6	47399	47404	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
89	NC_020543	CAA	2	6	47534	47539	66.67 %	0 %	0 %	33.33 %	Non-Coding
90	NC_020543	GGC	2	6	47684	47689	0 %	0 %	66.67 %	33.33 %	Non-Coding
91	NC_020543	CAC	2	6	52794	52799	33.33 %	0 %	0 %	66.67 %	Non-Coding
92	NC_020543	CAA	2	6	53341	53346	66.67 %	0 %	0 %	33.33 %	Non-Coding
93	NC_020543	TCA	2	6	53369	53374	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
94	NC_020543	GGA	2	6	53391	53396	33.33 %	0 %	66.67 %	0 %	Non-Coding
95	NC_020543	GGC	2	6	53413	53418	0 %	0 %	66.67 %	33.33 %	Non-Coding
96	NC_020543	CGG	2	6	53433	53438	0 %	0 %	66.67 %	33.33 %	Non-Coding
97	NC_020543	GGC	2	6	53456	53461	0 %	0 %	66.67 %	33.33 %	Non-Coding
98	NC_020543	TTC	2	6	53466	53471	0 %	66.67 %	0 %	33.33 %	Non-Coding
99	NC_020543	TGG	2	6	53560	53565	0 %	33.33 %	66.67 %	0 %	Non-Coding
100	NC_020543	GGC	2	6	53599	53604	0 %	0 %	66.67 %	33.33 %	Non-Coding
101	NC_020543	ATA	2	6	53671	53676	66.67 %	33.33 %	0 %	0 %	Non-Coding
102	NC_020543	TCG	2	6	53768	53773	0 %	33.33 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.