Hexa-nucleotide Repeats of Sphingomonas sp. MM-1 plasmid pISP0
Total Repeats: 143
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020542 | TCGTCA | 2 | 12 | 3374 | 3385 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 472433667 |
2 | NC_020542 | AAAATA | 2 | 12 | 3609 | 3620 | 83.33 % | 16.67 % | 0 % | 0 % | Non-Coding |
3 | NC_020542 | CGACCT | 2 | 12 | 5921 | 5932 | 16.67 % | 16.67 % | 16.67 % | 50 % | 472433669 |
4 | NC_020542 | GTGCCG | 2 | 12 | 6228 | 6239 | 0 % | 16.67 % | 50 % | 33.33 % | 472433669 |
5 | NC_020542 | CGCTCT | 2 | 12 | 7486 | 7497 | 0 % | 33.33 % | 16.67 % | 50 % | 472433670 |
6 | NC_020542 | CGATAT | 2 | 12 | 8060 | 8071 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 472433671 |
7 | NC_020542 | CGAGCG | 2 | 12 | 10419 | 10430 | 16.67 % | 0 % | 50 % | 33.33 % | 472433674 |
8 | NC_020542 | CGCCTG | 2 | 12 | 10438 | 10449 | 0 % | 16.67 % | 33.33 % | 50 % | 472433674 |
9 | NC_020542 | GGCACC | 2 | 12 | 18027 | 18038 | 16.67 % | 0 % | 33.33 % | 50 % | 472433681 |
10 | NC_020542 | AACATC | 2 | 12 | 18800 | 18811 | 50 % | 16.67 % | 0 % | 33.33 % | 472433682 |
11 | NC_020542 | TCGCCG | 2 | 12 | 20267 | 20278 | 0 % | 16.67 % | 33.33 % | 50 % | 472433684 |
12 | NC_020542 | TCGGAC | 2 | 12 | 22510 | 22521 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 472433686 |
13 | NC_020542 | GGCGCA | 2 | 12 | 22803 | 22814 | 16.67 % | 0 % | 50 % | 33.33 % | 472433687 |
14 | NC_020542 | CGATCC | 2 | 12 | 23651 | 23662 | 16.67 % | 16.67 % | 16.67 % | 50 % | 472433687 |
15 | NC_020542 | CGCAGG | 2 | 12 | 23774 | 23785 | 16.67 % | 0 % | 50 % | 33.33 % | 472433687 |
16 | NC_020542 | TCGCCT | 2 | 12 | 26740 | 26751 | 0 % | 33.33 % | 16.67 % | 50 % | 472433689 |
17 | NC_020542 | CAGGTG | 2 | 12 | 27639 | 27650 | 16.67 % | 16.67 % | 50 % | 16.67 % | 472433689 |
18 | NC_020542 | GTGCTG | 2 | 12 | 30989 | 31000 | 0 % | 33.33 % | 50 % | 16.67 % | 472433694 |
19 | NC_020542 | GCTGCC | 2 | 12 | 31308 | 31319 | 0 % | 16.67 % | 33.33 % | 50 % | 472433695 |
20 | NC_020542 | GATCGA | 2 | 12 | 32313 | 32324 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 472433695 |
21 | NC_020542 | GTCCTG | 2 | 12 | 32449 | 32460 | 0 % | 33.33 % | 33.33 % | 33.33 % | 472433695 |
22 | NC_020542 | GCTGGC | 2 | 12 | 32760 | 32771 | 0 % | 16.67 % | 50 % | 33.33 % | 472433695 |
23 | NC_020542 | CCTCGG | 2 | 12 | 33513 | 33524 | 0 % | 16.67 % | 33.33 % | 50 % | 472433695 |
24 | NC_020542 | GGCGCT | 2 | 12 | 36601 | 36612 | 0 % | 16.67 % | 50 % | 33.33 % | 472433701 |
25 | NC_020542 | GCACGC | 2 | 12 | 38112 | 38123 | 16.67 % | 0 % | 33.33 % | 50 % | 472433702 |
26 | NC_020542 | GCCGCA | 2 | 12 | 38130 | 38141 | 16.67 % | 0 % | 33.33 % | 50 % | 472433702 |
27 | NC_020542 | CCTTCA | 2 | 12 | 38797 | 38808 | 16.67 % | 33.33 % | 0 % | 50 % | 472433702 |
28 | NC_020542 | GCGCGG | 2 | 12 | 43009 | 43020 | 0 % | 0 % | 66.67 % | 33.33 % | 472433704 |
29 | NC_020542 | CTTCCG | 2 | 12 | 44552 | 44563 | 0 % | 33.33 % | 16.67 % | 50 % | 472433707 |
30 | NC_020542 | GTCGAG | 2 | 12 | 44965 | 44976 | 16.67 % | 16.67 % | 50 % | 16.67 % | 472433708 |
31 | NC_020542 | CCGGCA | 2 | 12 | 46381 | 46392 | 16.67 % | 0 % | 33.33 % | 50 % | 472433709 |
32 | NC_020542 | GACCGC | 2 | 12 | 48186 | 48197 | 16.67 % | 0 % | 33.33 % | 50 % | 472433709 |
33 | NC_020542 | TTCCGA | 2 | 12 | 49517 | 49528 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
34 | NC_020542 | TGCCAT | 2 | 12 | 49834 | 49845 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
35 | NC_020542 | GACAAG | 2 | 12 | 52654 | 52665 | 50 % | 0 % | 33.33 % | 16.67 % | 472433713 |
36 | NC_020542 | CGGCGC | 2 | 12 | 55692 | 55703 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
37 | NC_020542 | GCACCG | 2 | 12 | 56954 | 56965 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
38 | NC_020542 | CGATGC | 2 | 12 | 58045 | 58056 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 472433716 |
39 | NC_020542 | ACATGC | 2 | 12 | 59137 | 59148 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 472433717 |
40 | NC_020542 | GGGCAA | 2 | 12 | 59776 | 59787 | 33.33 % | 0 % | 50 % | 16.67 % | 472433718 |
41 | NC_020542 | CGCCGG | 2 | 12 | 59945 | 59956 | 0 % | 0 % | 50 % | 50 % | 472433718 |
42 | NC_020542 | AGTCGA | 2 | 12 | 60777 | 60788 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 472433719 |
43 | NC_020542 | CCGCGA | 2 | 12 | 61191 | 61202 | 16.67 % | 0 % | 33.33 % | 50 % | 472433719 |
44 | NC_020542 | GCTCCT | 2 | 12 | 64532 | 64543 | 0 % | 33.33 % | 16.67 % | 50 % | 472433723 |
45 | NC_020542 | GCCCTA | 2 | 12 | 65249 | 65260 | 16.67 % | 16.67 % | 16.67 % | 50 % | 472433724 |
46 | NC_020542 | GCAGGA | 2 | 12 | 66035 | 66046 | 33.33 % | 0 % | 50 % | 16.67 % | 472433725 |
47 | NC_020542 | ATCCAC | 2 | 12 | 67323 | 67334 | 33.33 % | 16.67 % | 0 % | 50 % | 472433725 |
48 | NC_020542 | AGGTGC | 2 | 12 | 68256 | 68267 | 16.67 % | 16.67 % | 50 % | 16.67 % | 472433726 |
49 | NC_020542 | TATCTA | 2 | 12 | 75048 | 75059 | 33.33 % | 50 % | 0 % | 16.67 % | Non-Coding |
50 | NC_020542 | GGGAAC | 2 | 12 | 75980 | 75991 | 33.33 % | 0 % | 50 % | 16.67 % | 472433733 |
51 | NC_020542 | CGGTGC | 2 | 12 | 76764 | 76775 | 0 % | 16.67 % | 50 % | 33.33 % | 472433733 |
52 | NC_020542 | ATCAAG | 2 | 12 | 77216 | 77227 | 50 % | 16.67 % | 16.67 % | 16.67 % | 472433733 |
53 | NC_020542 | CCGCGC | 2 | 12 | 83336 | 83347 | 0 % | 0 % | 33.33 % | 66.67 % | 472433740 |
54 | NC_020542 | CGCAGG | 2 | 12 | 84386 | 84397 | 16.67 % | 0 % | 50 % | 33.33 % | 472433740 |
55 | NC_020542 | CGATAT | 2 | 12 | 86151 | 86162 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 472433742 |
56 | NC_020542 | GCGCGG | 2 | 12 | 88257 | 88268 | 0 % | 0 % | 66.67 % | 33.33 % | 472433744 |
57 | NC_020542 | GTCCTG | 2 | 12 | 88717 | 88728 | 0 % | 33.33 % | 33.33 % | 33.33 % | 472433745 |
58 | NC_020542 | GCCGGC | 2 | 12 | 91149 | 91160 | 0 % | 0 % | 50 % | 50 % | 472433748 |
59 | NC_020542 | GCACCA | 2 | 12 | 91357 | 91368 | 33.33 % | 0 % | 16.67 % | 50 % | 472433749 |
60 | NC_020542 | GTGAAG | 2 | 12 | 93836 | 93847 | 33.33 % | 16.67 % | 50 % | 0 % | 472433752 |
61 | NC_020542 | GCCCCT | 2 | 12 | 95455 | 95466 | 0 % | 16.67 % | 16.67 % | 66.67 % | 472433754 |
62 | NC_020542 | GCGGCC | 2 | 12 | 96056 | 96067 | 0 % | 0 % | 50 % | 50 % | 472433755 |
63 | NC_020542 | CATGAT | 2 | 12 | 97594 | 97605 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 472433759 |
64 | NC_020542 | CGACCC | 2 | 12 | 98254 | 98265 | 16.67 % | 0 % | 16.67 % | 66.67 % | 472433759 |
65 | NC_020542 | CGACCT | 2 | 12 | 101702 | 101713 | 16.67 % | 16.67 % | 16.67 % | 50 % | 472433761 |
66 | NC_020542 | ATCACA | 2 | 12 | 103644 | 103655 | 50 % | 16.67 % | 0 % | 33.33 % | Non-Coding |
67 | NC_020542 | CGGTGC | 2 | 12 | 105367 | 105378 | 0 % | 16.67 % | 50 % | 33.33 % | Non-Coding |
68 | NC_020542 | GCTTCG | 2 | 12 | 109495 | 109506 | 0 % | 33.33 % | 33.33 % | 33.33 % | 472433769 |
69 | NC_020542 | TTTTCC | 2 | 12 | 111568 | 111579 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
70 | NC_020542 | CGACAC | 2 | 12 | 114862 | 114873 | 33.33 % | 0 % | 16.67 % | 50 % | 472433773 |
71 | NC_020542 | TGCCCC | 2 | 12 | 115466 | 115477 | 0 % | 16.67 % | 16.67 % | 66.67 % | Non-Coding |
72 | NC_020542 | ATCAGC | 2 | 12 | 116469 | 116480 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 472433774 |
73 | NC_020542 | CAGCGG | 2 | 12 | 120598 | 120609 | 16.67 % | 0 % | 50 % | 33.33 % | 472433779 |
74 | NC_020542 | CTCAAG | 2 | 12 | 120889 | 120900 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 472433779 |
75 | NC_020542 | CGACCG | 2 | 12 | 129497 | 129508 | 16.67 % | 0 % | 33.33 % | 50 % | 472433787 |
76 | NC_020542 | GCAGGT | 2 | 12 | 130104 | 130115 | 16.67 % | 16.67 % | 50 % | 16.67 % | 472433787 |
77 | NC_020542 | TTCTAT | 2 | 12 | 131358 | 131369 | 16.67 % | 66.67 % | 0 % | 16.67 % | 472433789 |
78 | NC_020542 | GAACCG | 2 | 12 | 131559 | 131570 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472433789 |
79 | NC_020542 | CTCGTC | 2 | 12 | 132311 | 132322 | 0 % | 33.33 % | 16.67 % | 50 % | 472433790 |
80 | NC_020542 | TTCGAT | 2 | 12 | 134388 | 134399 | 16.67 % | 50 % | 16.67 % | 16.67 % | 472433791 |
81 | NC_020542 | GAAGCT | 2 | 12 | 140000 | 140011 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 472433795 |
82 | NC_020542 | GCCGGG | 2 | 12 | 141696 | 141707 | 0 % | 0 % | 66.67 % | 33.33 % | 472433796 |
83 | NC_020542 | TTGGTC | 2 | 12 | 142974 | 142985 | 0 % | 50 % | 33.33 % | 16.67 % | 472433798 |
84 | NC_020542 | GGCGCT | 2 | 12 | 146071 | 146082 | 0 % | 16.67 % | 50 % | 33.33 % | 472433799 |
85 | NC_020542 | CGATGG | 2 | 12 | 148973 | 148984 | 16.67 % | 16.67 % | 50 % | 16.67 % | 472433803 |
86 | NC_020542 | CGTTGA | 2 | 12 | 150192 | 150203 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 472433804 |
87 | NC_020542 | TCGCGG | 2 | 12 | 151426 | 151437 | 0 % | 16.67 % | 50 % | 33.33 % | 472433805 |
88 | NC_020542 | ACCGGC | 2 | 12 | 155606 | 155617 | 16.67 % | 0 % | 33.33 % | 50 % | 472433809 |
89 | NC_020542 | CTGCGC | 2 | 12 | 155686 | 155697 | 0 % | 16.67 % | 33.33 % | 50 % | 472433809 |
90 | NC_020542 | CGGTGT | 2 | 12 | 157455 | 157466 | 0 % | 33.33 % | 50 % | 16.67 % | 472433811 |
91 | NC_020542 | GATGCG | 2 | 12 | 157984 | 157995 | 16.67 % | 16.67 % | 50 % | 16.67 % | 472433811 |
92 | NC_020542 | ATCAGC | 2 | 12 | 158720 | 158731 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 472433811 |
93 | NC_020542 | CGCTCG | 2 | 12 | 161576 | 161587 | 0 % | 16.67 % | 33.33 % | 50 % | 472433813 |
94 | NC_020542 | TCAAGA | 2 | 12 | 164306 | 164317 | 50 % | 16.67 % | 16.67 % | 16.67 % | 472433816 |
95 | NC_020542 | GCCATG | 2 | 12 | 168229 | 168240 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 472433820 |
96 | NC_020542 | TGCCGA | 2 | 12 | 170008 | 170019 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 472433823 |
97 | NC_020542 | TGCCGC | 2 | 12 | 174198 | 174209 | 0 % | 16.67 % | 33.33 % | 50 % | 472433825 |
98 | NC_020542 | ATGAGG | 2 | 12 | 182252 | 182263 | 33.33 % | 16.67 % | 50 % | 0 % | 472433835 |
99 | NC_020542 | TCATGC | 2 | 12 | 183015 | 183026 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 472433836 |
100 | NC_020542 | GGCACC | 2 | 12 | 189307 | 189318 | 16.67 % | 0 % | 33.33 % | 50 % | 472433841 |
101 | NC_020542 | GACCGA | 2 | 12 | 194170 | 194181 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472433850 |
102 | NC_020542 | CGATCC | 2 | 12 | 197619 | 197630 | 16.67 % | 16.67 % | 16.67 % | 50 % | 472433854 |
103 | NC_020542 | GGGCGA | 2 | 12 | 199502 | 199513 | 16.67 % | 0 % | 66.67 % | 16.67 % | 472433856 |
104 | NC_020542 | TGCCGG | 2 | 12 | 199546 | 199557 | 0 % | 16.67 % | 50 % | 33.33 % | 472433856 |
105 | NC_020542 | CTGGTC | 2 | 12 | 201886 | 201897 | 0 % | 33.33 % | 33.33 % | 33.33 % | 472433858 |
106 | NC_020542 | CGGAAG | 2 | 12 | 203748 | 203759 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
107 | NC_020542 | CCTTCA | 2 | 12 | 210724 | 210735 | 16.67 % | 33.33 % | 0 % | 50 % | 472433870 |
108 | NC_020542 | ATCGAC | 2 | 12 | 211800 | 211811 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 472433870 |
109 | NC_020542 | TTGCAG | 2 | 12 | 212898 | 212909 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 472433871 |
110 | NC_020542 | GGTGGC | 2 | 12 | 215443 | 215454 | 0 % | 16.67 % | 66.67 % | 16.67 % | 472433875 |
111 | NC_020542 | CTGCGC | 2 | 12 | 215945 | 215956 | 0 % | 16.67 % | 33.33 % | 50 % | 472433875 |
112 | NC_020542 | GGCAAT | 2 | 12 | 217124 | 217135 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 472433876 |
113 | NC_020542 | CAATAT | 2 | 12 | 217189 | 217200 | 50 % | 33.33 % | 0 % | 16.67 % | 472433876 |
114 | NC_020542 | TCGGCG | 2 | 12 | 219004 | 219015 | 0 % | 16.67 % | 50 % | 33.33 % | 472433878 |
115 | NC_020542 | GCCGAG | 2 | 12 | 221284 | 221295 | 16.67 % | 0 % | 50 % | 33.33 % | 472433880 |
116 | NC_020542 | AAGCGC | 2 | 12 | 224851 | 224862 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472433883 |
117 | NC_020542 | GCGAGG | 2 | 12 | 225115 | 225126 | 16.67 % | 0 % | 66.67 % | 16.67 % | 472433883 |
118 | NC_020542 | CGAGGA | 2 | 12 | 225323 | 225334 | 33.33 % | 0 % | 50 % | 16.67 % | 472433883 |
119 | NC_020542 | GTCGCC | 2 | 12 | 226032 | 226043 | 0 % | 16.67 % | 33.33 % | 50 % | 472433883 |
120 | NC_020542 | CGCAGG | 2 | 12 | 228648 | 228659 | 16.67 % | 0 % | 50 % | 33.33 % | 472433885 |
121 | NC_020542 | CGGCAA | 2 | 12 | 229632 | 229643 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472433885 |
122 | NC_020542 | GACCGA | 2 | 12 | 234340 | 234351 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472433886 |
123 | NC_020542 | TCGACA | 2 | 12 | 235302 | 235313 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 472433886 |
124 | NC_020542 | CCTGCT | 2 | 12 | 236916 | 236927 | 0 % | 33.33 % | 16.67 % | 50 % | 472433887 |
125 | NC_020542 | CCGACA | 2 | 12 | 237392 | 237403 | 33.33 % | 0 % | 16.67 % | 50 % | 472433887 |
126 | NC_020542 | GTGCCG | 2 | 12 | 237967 | 237978 | 0 % | 16.67 % | 50 % | 33.33 % | 472433887 |
127 | NC_020542 | CGGGGA | 2 | 12 | 239351 | 239362 | 16.67 % | 0 % | 66.67 % | 16.67 % | 472433888 |
128 | NC_020542 | GCCTTC | 2 | 12 | 243281 | 243292 | 0 % | 33.33 % | 16.67 % | 50 % | 472433889 |
129 | NC_020542 | CCGAAG | 2 | 12 | 245478 | 245489 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472433891 |
130 | NC_020542 | GGTGCG | 2 | 12 | 252622 | 252633 | 0 % | 16.67 % | 66.67 % | 16.67 % | 472433896 |
131 | NC_020542 | GGGCCA | 2 | 12 | 253222 | 253233 | 16.67 % | 0 % | 50 % | 33.33 % | 472433897 |
132 | NC_020542 | CAGCGA | 2 | 12 | 253811 | 253822 | 33.33 % | 0 % | 33.33 % | 33.33 % | 472433897 |
133 | NC_020542 | GATTGA | 2 | 12 | 254387 | 254398 | 33.33 % | 33.33 % | 33.33 % | 0 % | 472433898 |
134 | NC_020542 | CCCTCG | 2 | 12 | 255627 | 255638 | 0 % | 16.67 % | 16.67 % | 66.67 % | 472433899 |
135 | NC_020542 | CCGGCA | 2 | 12 | 258317 | 258328 | 16.67 % | 0 % | 33.33 % | 50 % | 472433903 |
136 | NC_020542 | GCAACA | 2 | 12 | 259258 | 259269 | 50 % | 0 % | 16.67 % | 33.33 % | 472433904 |
137 | NC_020542 | GCCCGC | 2 | 12 | 262691 | 262702 | 0 % | 0 % | 33.33 % | 66.67 % | 472433907 |
138 | NC_020542 | CCCTTG | 2 | 12 | 263791 | 263802 | 0 % | 33.33 % | 16.67 % | 50 % | 472433908 |
139 | NC_020542 | TGGAGA | 2 | 12 | 264145 | 264156 | 33.33 % | 16.67 % | 50 % | 0 % | 472433908 |
140 | NC_020542 | CGCGCA | 2 | 12 | 265870 | 265881 | 16.67 % | 0 % | 33.33 % | 50 % | 472433909 |
141 | NC_020542 | AGCACC | 2 | 12 | 269611 | 269622 | 33.33 % | 0 % | 16.67 % | 50 % | Non-Coding |
142 | NC_020542 | CGCTGC | 2 | 12 | 269964 | 269975 | 0 % | 16.67 % | 33.33 % | 50 % | Non-Coding |
143 | NC_020542 | GATCGT | 2 | 12 | 273599 | 273610 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 472433914 |