Tetra-nucleotide Coding Repeats of Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 plasmid pCFSAN001992_1
Total Repeats: 42
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020306 | TTCG | 2 | 8 | 102 | 109 | 0 % | 50 % | 25 % | 25 % | 452119510 |
2 | NC_020306 | TATG | 2 | 8 | 1676 | 1683 | 25 % | 50 % | 25 % | 0 % | 452119511 |
3 | NC_020306 | CCGT | 2 | 8 | 2643 | 2650 | 0 % | 25 % | 25 % | 50 % | 452119512 |
4 | NC_020306 | CGAC | 2 | 8 | 2824 | 2831 | 25 % | 0 % | 25 % | 50 % | 452119512 |
5 | NC_020306 | ACCG | 2 | 8 | 2915 | 2922 | 25 % | 0 % | 25 % | 50 % | 452119512 |
6 | NC_020306 | CATT | 2 | 8 | 5208 | 5215 | 25 % | 50 % | 0 % | 25 % | 452119514 |
7 | NC_020306 | GCCA | 2 | 8 | 5270 | 5277 | 25 % | 0 % | 25 % | 50 % | 452119514 |
8 | NC_020306 | CTGG | 2 | 8 | 6039 | 6046 | 0 % | 25 % | 50 % | 25 % | 452119515 |
9 | NC_020306 | CTGG | 2 | 8 | 6471 | 6478 | 0 % | 25 % | 50 % | 25 % | 452119515 |
10 | NC_020306 | CTGG | 2 | 8 | 6670 | 6677 | 0 % | 25 % | 50 % | 25 % | 452119516 |
11 | NC_020306 | CAAC | 2 | 8 | 6878 | 6885 | 50 % | 0 % | 0 % | 50 % | 452119517 |
12 | NC_020306 | GACG | 2 | 8 | 7214 | 7221 | 25 % | 0 % | 50 % | 25 % | 452119518 |
13 | NC_020306 | GTAC | 2 | 8 | 7822 | 7829 | 25 % | 25 % | 25 % | 25 % | 452119519 |
14 | NC_020306 | GAAA | 2 | 8 | 8281 | 8288 | 75 % | 0 % | 25 % | 0 % | 452119520 |
15 | NC_020306 | TGGG | 2 | 8 | 8939 | 8946 | 0 % | 25 % | 75 % | 0 % | 452119522 |
16 | NC_020306 | GCAT | 2 | 8 | 9011 | 9018 | 25 % | 25 % | 25 % | 25 % | 452119522 |
17 | NC_020306 | CTGG | 2 | 8 | 11227 | 11234 | 0 % | 25 % | 50 % | 25 % | 452119524 |
18 | NC_020306 | GCCG | 2 | 8 | 11271 | 11278 | 0 % | 0 % | 50 % | 50 % | 452119524 |
19 | NC_020306 | GTCA | 2 | 8 | 11499 | 11506 | 25 % | 25 % | 25 % | 25 % | 452119525 |
20 | NC_020306 | CCTG | 2 | 8 | 11554 | 11561 | 0 % | 25 % | 25 % | 50 % | 452119525 |
21 | NC_020306 | GCTG | 2 | 8 | 11672 | 11679 | 0 % | 25 % | 50 % | 25 % | 452119525 |
22 | NC_020306 | CAGT | 2 | 8 | 11691 | 11698 | 25 % | 25 % | 25 % | 25 % | 452119525 |
23 | NC_020306 | ACAA | 2 | 8 | 12827 | 12834 | 75 % | 0 % | 0 % | 25 % | 452119526 |
24 | NC_020306 | TGAA | 2 | 8 | 13448 | 13455 | 50 % | 25 % | 25 % | 0 % | 452119526 |
25 | NC_020306 | GTTT | 2 | 8 | 14237 | 14244 | 0 % | 75 % | 25 % | 0 % | 452119528 |
26 | NC_020306 | TTAT | 2 | 8 | 14518 | 14525 | 25 % | 75 % | 0 % | 0 % | 452119528 |
27 | NC_020306 | AGCC | 2 | 8 | 14563 | 14570 | 25 % | 0 % | 25 % | 50 % | 452119528 |
28 | NC_020306 | TGAT | 2 | 8 | 14722 | 14729 | 25 % | 50 % | 25 % | 0 % | 452119528 |
29 | NC_020306 | CGTC | 2 | 8 | 14819 | 14826 | 0 % | 25 % | 25 % | 50 % | 452119528 |
30 | NC_020306 | AGTC | 2 | 8 | 14885 | 14892 | 25 % | 25 % | 25 % | 25 % | 452119528 |
31 | NC_020306 | TTCG | 2 | 8 | 15021 | 15028 | 0 % | 50 % | 25 % | 25 % | 452119528 |
32 | NC_020306 | CTCA | 2 | 8 | 15822 | 15829 | 25 % | 25 % | 0 % | 50 % | 452119528 |
33 | NC_020306 | ATGA | 2 | 8 | 15852 | 15859 | 50 % | 25 % | 25 % | 0 % | 452119528 |
34 | NC_020306 | GTAA | 2 | 8 | 16389 | 16396 | 50 % | 25 % | 25 % | 0 % | 452119528 |
35 | NC_020306 | TGAA | 2 | 8 | 17550 | 17557 | 50 % | 25 % | 25 % | 0 % | 452119529 |
36 | NC_020306 | TGGG | 2 | 8 | 18799 | 18806 | 0 % | 25 % | 75 % | 0 % | 452119531 |
37 | NC_020306 | TTAT | 2 | 8 | 19158 | 19165 | 25 % | 75 % | 0 % | 0 % | 452119531 |
38 | NC_020306 | GAAA | 2 | 8 | 19591 | 19598 | 75 % | 0 % | 25 % | 0 % | 452119532 |
39 | NC_020306 | ATTC | 2 | 8 | 20095 | 20102 | 25 % | 50 % | 0 % | 25 % | 452119532 |
40 | NC_020306 | ATTT | 2 | 8 | 21118 | 21125 | 25 % | 75 % | 0 % | 0 % | 452119533 |
41 | NC_020306 | CCTG | 2 | 8 | 21644 | 21651 | 0 % | 25 % | 25 % | 50 % | 452119534 |
42 | NC_020306 | GAGC | 2 | 8 | 21798 | 21805 | 25 % | 0 % | 50 % | 25 % | 452119534 |