MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Synechocystis sp. PCC 6803 plasmid pSYSX_M

Total Repeats: 146

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020297	GTA	2	6	97	102	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
2	NC_020297	CTG	2	6	136	141	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
3	NC_020297	CGA	2	6	156	161	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
4	NC_020297	CCG	2	6	203	208	0 %	0 %	33.33 %	66.67 %	Non-Coding
5	NC_020297	CAA	2	6	258	263	66.67 %	0 %	0 %	33.33 %	Non-Coding
6	NC_020297	TCT	2	6	269	274	0 %	66.67 %	0 %	33.33 %	Non-Coding
7	NC_020297	GTG	2	6	3102	3107	0 %	33.33 %	66.67 %	0 %	Non-Coding
8	NC_020297	ATT	2	6	3271	3276	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_020297	AAT	2	6	3358	3363	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_020297	CAG	2	6	3369	3374	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
11	NC_020297	ATT	2	6	3481	3486	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_020297	GCC	2	6	6315	6320	0 %	0 %	33.33 %	66.67 %	Non-Coding
13	NC_020297	ACC	2	6	6349	6354	33.33 %	0 %	0 %	66.67 %	Non-Coding
14	NC_020297	ATT	2	6	7482	7487	33.33 %	66.67 %	0 %	0 %	Non-Coding
15	NC_020297	CTC	2	6	7527	7532	0 %	33.33 %	0 %	66.67 %	Non-Coding
16	NC_020297	GGA	2	6	7550	7555	33.33 %	0 %	66.67 %	0 %	Non-Coding
17	NC_020297	GAA	2	6	8607	8612	66.67 %	0 %	33.33 %	0 %	Non-Coding
18	NC_020297	CAC	2	6	10361	10366	33.33 %	0 %	0 %	66.67 %	Non-Coding
19	NC_020297	TTA	2	6	10997	11002	33.33 %	66.67 %	0 %	0 %	Non-Coding
20	NC_020297	ATT	2	6	11026	11031	33.33 %	66.67 %	0 %	0 %	Non-Coding
21	NC_020297	ATA	2	6	11147	11152	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_020297	TAT	2	6	11230	11235	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_020297	CAA	2	6	11298	11303	66.67 %	0 %	0 %	33.33 %	Non-Coding
24	NC_020297	AAG	2	6	21818	21823	66.67 %	0 %	33.33 %	0 %	Non-Coding
25	NC_020297	CCT	2	6	23038	23043	0 %	33.33 %	0 %	66.67 %	Non-Coding
26	NC_020297	TGG	2	6	23852	23857	0 %	33.33 %	66.67 %	0 %	Non-Coding
27	NC_020297	CCA	2	6	24233	24238	33.33 %	0 %	0 %	66.67 %	Non-Coding
28	NC_020297	AAG	2	6	24500	24505	66.67 %	0 %	33.33 %	0 %	Non-Coding
29	NC_020297	ATT	2	6	24557	24562	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_020297	CCA	2	6	24605	24610	33.33 %	0 %	0 %	66.67 %	Non-Coding
31	NC_020297	CCA	2	6	25509	25514	33.33 %	0 %	0 %	66.67 %	Non-Coding
32	NC_020297	AGA	2	6	25734	25739	66.67 %	0 %	33.33 %	0 %	Non-Coding
33	NC_020297	GGA	2	6	25818	25823	33.33 %	0 %	66.67 %	0 %	Non-Coding
34	NC_020297	TGA	2	6	25870	25875	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
35	NC_020297	ACA	2	6	25923	25928	66.67 %	0 %	0 %	33.33 %	Non-Coding
36	NC_020297	GAT	2	6	25996	26001	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
37	NC_020297	GAA	2	6	26009	26014	66.67 %	0 %	33.33 %	0 %	Non-Coding
38	NC_020297	CCA	2	6	26067	26072	33.33 %	0 %	0 %	66.67 %	Non-Coding
39	NC_020297	CTA	2	6	27523	27528	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_020297	AAC	2	6	27805	27810	66.67 %	0 %	0 %	33.33 %	Non-Coding
41	NC_020297	GCG	2	6	27837	27842	0 %	0 %	66.67 %	33.33 %	Non-Coding
42	NC_020297	AAG	2	6	27925	27930	66.67 %	0 %	33.33 %	0 %	Non-Coding
43	NC_020297	AGG	2	6	27943	27948	33.33 %	0 %	66.67 %	0 %	Non-Coding
44	NC_020297	GAA	2	6	32026	32031	66.67 %	0 %	33.33 %	0 %	Non-Coding
45	NC_020297	AAT	2	6	32582	32587	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_020297	GTT	2	6	33501	33506	0 %	66.67 %	33.33 %	0 %	Non-Coding
47	NC_020297	AAT	2	6	33517	33522	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_020297	CAG	2	6	33531	33536	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
49	NC_020297	ATT	2	6	33601	33606	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_020297	ATG	2	6	33762	33767	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
51	NC_020297	GGT	2	6	33822	33827	0 %	33.33 %	66.67 %	0 %	Non-Coding
52	NC_020297	TAT	2	6	33843	33848	33.33 %	66.67 %	0 %	0 %	Non-Coding
53	NC_020297	TGA	2	6	34345	34350	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
54	NC_020297	AGG	2	6	34767	34772	33.33 %	0 %	66.67 %	0 %	Non-Coding
55	NC_020297	AAT	2	6	42974	42979	66.67 %	33.33 %	0 %	0 %	Non-Coding
56	NC_020297	TTG	2	6	43395	43400	0 %	66.67 %	33.33 %	0 %	Non-Coding
57	NC_020297	ATT	2	6	54285	54290	33.33 %	66.67 %	0 %	0 %	Non-Coding
58	NC_020297	TTG	2	6	54296	54301	0 %	66.67 %	33.33 %	0 %	Non-Coding
59	NC_020297	CAT	2	6	55326	55331	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
60	NC_020297	ATG	2	6	56840	56845	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
61	NC_020297	ATT	2	6	56917	56922	33.33 %	66.67 %	0 %	0 %	Non-Coding
62	NC_020297	ATT	2	6	56927	56932	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_020297	TGA	2	6	56939	56944	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
64	NC_020297	ACT	2	6	56954	56959	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
65	NC_020297	ATG	2	6	57002	57007	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
66	NC_020297	ATT	2	6	57988	57993	33.33 %	66.67 %	0 %	0 %	Non-Coding
67	NC_020297	AAT	2	6	58075	58080	66.67 %	33.33 %	0 %	0 %	Non-Coding
68	NC_020297	CAG	2	6	58086	58091	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
69	NC_020297	GCC	2	6	61033	61038	0 %	0 %	33.33 %	66.67 %	Non-Coding
70	NC_020297	ACC	2	6	61067	61072	33.33 %	0 %	0 %	66.67 %	Non-Coding
71	NC_020297	ATT	2	6	62200	62205	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_020297	CTC	2	6	62245	62250	0 %	33.33 %	0 %	66.67 %	Non-Coding
73	NC_020297	GGA	2	6	62268	62273	33.33 %	0 %	66.67 %	0 %	Non-Coding
74	NC_020297	GAA	2	6	63325	63330	66.67 %	0 %	33.33 %	0 %	Non-Coding
75	NC_020297	CAC	2	6	65079	65084	33.33 %	0 %	0 %	66.67 %	Non-Coding
76	NC_020297	TTA	2	6	65715	65720	33.33 %	66.67 %	0 %	0 %	Non-Coding
77	NC_020297	ATT	2	6	65744	65749	33.33 %	66.67 %	0 %	0 %	Non-Coding
78	NC_020297	ATA	2	6	65865	65870	66.67 %	33.33 %	0 %	0 %	Non-Coding
79	NC_020297	TAT	2	6	65948	65953	33.33 %	66.67 %	0 %	0 %	Non-Coding
80	NC_020297	CAA	2	6	66016	66021	66.67 %	0 %	0 %	33.33 %	Non-Coding
81	NC_020297	AAG	2	6	76536	76541	66.67 %	0 %	33.33 %	0 %	Non-Coding
82	NC_020297	CCT	2	6	77756	77761	0 %	33.33 %	0 %	66.67 %	Non-Coding
83	NC_020297	TGG	2	6	78570	78575	0 %	33.33 %	66.67 %	0 %	Non-Coding
84	NC_020297	CCA	2	6	78951	78956	33.33 %	0 %	0 %	66.67 %	Non-Coding
85	NC_020297	AAG	2	6	79218	79223	66.67 %	0 %	33.33 %	0 %	Non-Coding
86	NC_020297	ATT	2	6	79275	79280	33.33 %	66.67 %	0 %	0 %	Non-Coding
87	NC_020297	CCA	2	6	79323	79328	33.33 %	0 %	0 %	66.67 %	Non-Coding
88	NC_020297	CCA	2	6	80227	80232	33.33 %	0 %	0 %	66.67 %	Non-Coding
89	NC_020297	AGA	2	6	80452	80457	66.67 %	0 %	33.33 %	0 %	Non-Coding
90	NC_020297	GGA	2	6	80536	80541	33.33 %	0 %	66.67 %	0 %	Non-Coding
91	NC_020297	TGA	2	6	80588	80593	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
92	NC_020297	ACA	2	6	80641	80646	66.67 %	0 %	0 %	33.33 %	Non-Coding
93	NC_020297	GAT	2	6	80714	80719	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
94	NC_020297	GAA	2	6	80727	80732	66.67 %	0 %	33.33 %	0 %	Non-Coding
95	NC_020297	CCA	2	6	80785	80790	33.33 %	0 %	0 %	66.67 %	Non-Coding
96	NC_020297	CTA	2	6	82241	82246	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
97	NC_020297	AAC	2	6	82523	82528	66.67 %	0 %	0 %	33.33 %	Non-Coding
98	NC_020297	GGC	2	6	82554	82559	0 %	0 %	66.67 %	33.33 %	Non-Coding
99	NC_020297	AAT	2	6	82612	82617	66.67 %	33.33 %	0 %	0 %	Non-Coding
100	NC_020297	AAG	2	6	82643	82648	66.67 %	0 %	33.33 %	0 %	Non-Coding
101	NC_020297	GCA	2	6	87957	87962	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
102	NC_020297	GAG	2	6	88004	88009	33.33 %	0 %	66.67 %	0 %	Non-Coding
103	NC_020297	TTA	2	6	88047	88052	33.33 %	66.67 %	0 %	0 %	Non-Coding
104	NC_020297	TGA	2	6	88064	88069	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
105	NC_020297	GGC	2	6	88474	88479	0 %	0 %	66.67 %	33.33 %	Non-Coding
106	NC_020297	TAT	2	6	93384	93389	33.33 %	66.67 %	0 %	0 %	Non-Coding
107	NC_020297	TAA	2	6	93410	93415	66.67 %	33.33 %	0 %	0 %	Non-Coding
108	NC_020297	GTG	2	6	93464	93469	0 %	33.33 %	66.67 %	0 %	Non-Coding
109	NC_020297	GAT	2	6	93782	93787	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
110	NC_020297	ATC	2	6	94192	94197	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
111	NC_020297	ATT	2	6	94272	94277	33.33 %	66.67 %	0 %	0 %	Non-Coding
112	NC_020297	AAC	2	6	98643	98648	66.67 %	0 %	0 %	33.33 %	Non-Coding
113	NC_020297	CCG	2	6	98672	98677	0 %	0 %	33.33 %	66.67 %	Non-Coding
114	NC_020297	TCG	2	6	98696	98701	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
115	NC_020297	GGT	2	6	98715	98720	0 %	33.33 %	66.67 %	0 %	Non-Coding
116	NC_020297	ATT	2	6	98761	98766	33.33 %	66.67 %	0 %	0 %	Non-Coding
117	NC_020297	TGA	2	6	98901	98906	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
118	NC_020297	AAT	2	6	98936	98941	66.67 %	33.33 %	0 %	0 %	Non-Coding
119	NC_020297	AAT	2	6	99522	99527	66.67 %	33.33 %	0 %	0 %	Non-Coding
120	NC_020297	ATT	2	6	100572	100577	33.33 %	66.67 %	0 %	0 %	Non-Coding
121	NC_020297	TAA	2	6	101833	101838	66.67 %	33.33 %	0 %	0 %	Non-Coding
122	NC_020297	GTC	2	6	101984	101989	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
123	NC_020297	GTA	2	6	102139	102144	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
124	NC_020297	ATC	2	6	102735	102740	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
125	NC_020297	TTA	2	6	102818	102823	33.33 %	66.67 %	0 %	0 %	Non-Coding
126	NC_020297	ATT	2	6	104413	104418	33.33 %	66.67 %	0 %	0 %	Non-Coding
127	NC_020297	ATT	2	6	104423	104428	33.33 %	66.67 %	0 %	0 %	Non-Coding
128	NC_020297	ATC	2	6	104598	104603	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
129	NC_020297	TCG	2	6	104821	104826	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
130	NC_020297	TAT	2	6	104927	104932	33.33 %	66.67 %	0 %	0 %	Non-Coding
131	NC_020297	ATA	2	6	104966	104971	66.67 %	33.33 %	0 %	0 %	Non-Coding
132	NC_020297	GGT	3	9	105008	105016	0 %	33.33 %	66.67 %	0 %	Non-Coding
133	NC_020297	AAG	2	6	105080	105085	66.67 %	0 %	33.33 %	0 %	Non-Coding
134	NC_020297	CGC	2	6	105116	105121	0 %	0 %	33.33 %	66.67 %	Non-Coding
135	NC_020297	ATG	2	6	105132	105137	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
136	NC_020297	GTG	3	9	105222	105230	0 %	33.33 %	66.67 %	0 %	Non-Coding
137	NC_020297	AGG	2	6	105323	105328	33.33 %	0 %	66.67 %	0 %	Non-Coding
138	NC_020297	TCT	2	6	105342	105347	0 %	66.67 %	0 %	33.33 %	Non-Coding
139	NC_020297	GCT	2	6	105354	105359	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
140	NC_020297	GTT	2	6	105425	105430	0 %	66.67 %	33.33 %	0 %	Non-Coding
141	NC_020297	TTG	2	6	105526	105531	0 %	66.67 %	33.33 %	0 %	Non-Coding
142	NC_020297	TGG	2	6	105563	105568	0 %	33.33 %	66.67 %	0 %	Non-Coding
143	NC_020297	TGG	2	6	105571	105576	0 %	33.33 %	66.67 %	0 %	Non-Coding
144	NC_020297	ATC	2	6	105840	105845	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
145	NC_020297	TGA	2	6	105938	105943	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
146	NC_020297	CTC	2	6	105959	105964	0 %	33.33 %	0 %	66.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.