MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Lawsonia intracellularis N343 plasmid 3

Total Repeats: 19

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020130	AAATGA	2	12	27367	27378	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
2	NC_020130	GAGGAA	2	12	30059	30070	50 %	0 %	50 %	0 %	Non-Coding
3	NC_020130	TTTATT	2	12	36223	36234	16.67 %	83.33 %	0 %	0 %	Non-Coding
4	NC_020130	TTAAAA	2	12	46740	46751	66.67 %	33.33 %	0 %	0 %	Non-Coding
5	NC_020130	CAAAAA	2	12	51772	51783	83.33 %	0 %	0 %	16.67 %	Non-Coding
6	NC_020130	CATAGT	2	12	52070	52081	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
7	NC_020130	TATAAG	2	12	55685	55696	50 %	33.33 %	16.67 %	0 %	Non-Coding
8	NC_020130	AAAGAA	2	12	57952	57963	83.33 %	0 %	16.67 %	0 %	Non-Coding
9	NC_020130	TTTATA	2	12	69943	69954	33.33 %	66.67 %	0 %	0 %	Non-Coding
10	NC_020130	ATCATT	2	12	77720	77731	33.33 %	50 %	0 %	16.67 %	Non-Coding
11	NC_020130	ATTATA	2	12	88848	88859	50 %	50 %	0 %	0 %	Non-Coding
12	NC_020130	TAAAAA	2	12	93853	93864	83.33 %	16.67 %	0 %	0 %	Non-Coding
13	NC_020130	TGATAC	2	12	98621	98632	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
14	NC_020130	ATTAAT	2	12	107583	107594	50 %	50 %	0 %	0 %	Non-Coding
15	NC_020130	ATAATT	2	12	110286	110297	50 %	50 %	0 %	0 %	Non-Coding
16	NC_020130	CTTTAT	2	12	121791	121802	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
17	NC_020130	GTTATT	2	12	133276	133287	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
18	NC_020130	ATAGTT	2	12	140483	140494	33.33 %	50 %	16.67 %	0 %	Non-Coding
19	NC_020130	ACTATT	2	12	146278	146289	33.33 %	50 %	0 %	16.67 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.