MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c

Total Repeats: 52

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020062	CGCGGG	2	12	4923	4934	0 %	0 %	66.67 %	33.33 %	Non-Coding
2	NC_020062	GCCGAG	2	12	169424	169435	16.67 %	0 %	50 %	33.33 %	Non-Coding
3	NC_020062	CTGTCG	2	12	174083	174094	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
4	NC_020062	GTCGAA	2	12	174119	174130	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
5	NC_020062	GCATTG	2	12	223348	223359	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
6	NC_020062	CAATGT	2	12	240284	240295	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
7	NC_020062	TGGAGA	2	12	303492	303503	33.33 %	16.67 %	50 %	0 %	Non-Coding
8	NC_020062	CAAAGA	2	12	383446	383457	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
9	NC_020062	ATTCCC	2	12	498534	498545	16.67 %	33.33 %	0 %	50 %	Non-Coding
10	NC_020062	CGGAAA	2	12	507844	507855	50 %	0 %	33.33 %	16.67 %	Non-Coding
11	NC_020062	AGGGAG	2	12	554633	554644	33.33 %	0 %	66.67 %	0 %	Non-Coding
12	NC_020062	TGGGCA	2	12	575601	575612	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
13	NC_020062	GATGGC	2	12	577565	577576	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
14	NC_020062	TTTTCA	2	12	579775	579786	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
15	NC_020062	GCCAAA	2	12	582891	582902	50 %	0 %	16.67 %	33.33 %	Non-Coding
16	NC_020062	TGATCA	2	12	651552	651563	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
17	NC_020062	CACTCA	2	12	664686	664697	33.33 %	16.67 %	0 %	50 %	Non-Coding
18	NC_020062	GATCGA	2	12	680045	680056	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
19	NC_020062	CAAATC	2	12	739666	739677	50 %	16.67 %	0 %	33.33 %	Non-Coding
20	NC_020062	AGGCTG	2	12	748104	748115	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
21	NC_020062	TATTTT	2	12	792447	792458	16.67 %	83.33 %	0 %	0 %	Non-Coding
22	NC_020062	CATCTC	2	12	847273	847284	16.67 %	33.33 %	0 %	50 %	Non-Coding
23	NC_020062	AGCGCG	2	12	847823	847834	16.67 %	0 %	50 %	33.33 %	Non-Coding
24	NC_020062	TGACGA	2	12	875672	875683	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
25	NC_020062	CGCGTC	2	12	894846	894857	0 %	16.67 %	33.33 %	50 %	Non-Coding
26	NC_020062	ATCAAG	2	12	931714	931725	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
27	NC_020062	CCTTTG	2	12	952350	952361	0 %	50 %	16.67 %	33.33 %	Non-Coding
28	NC_020062	TGCTGT	2	12	1060091	1060102	0 %	50 %	33.33 %	16.67 %	Non-Coding
29	NC_020062	TCCATT	2	12	1074225	1074236	16.67 %	50 %	0 %	33.33 %	Non-Coding
30	NC_020062	TTCCCG	2	12	1075365	1075376	0 %	33.33 %	16.67 %	50 %	Non-Coding
31	NC_020062	TCAGTT	2	12	1247432	1247443	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
32	NC_020062	CATTTC	2	12	1321096	1321107	16.67 %	50 %	0 %	33.33 %	Non-Coding
33	NC_020062	CGAAAT	2	12	1334331	1334342	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
34	NC_020062	CCAGGA	2	12	1342817	1342828	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
35	NC_020062	AAGTGA	2	12	1374960	1374971	50 %	16.67 %	33.33 %	0 %	Non-Coding
36	NC_020062	CGGCCG	2	12	1452773	1452784	0 %	0 %	50 %	50 %	Non-Coding
37	NC_020062	GAAAAT	2	12	1550425	1550436	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
38	NC_020062	AAACAG	2	12	1653177	1653188	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
39	NC_020062	CAAAAG	2	12	1665810	1665821	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
40	NC_020062	AGGTTC	2	12	1678708	1678719	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
41	NC_020062	GCCGGC	2	12	1694153	1694164	0 %	0 %	50 %	50 %	Non-Coding
42	NC_020062	GAGAAG	2	12	1728369	1728380	50 %	0 %	50 %	0 %	Non-Coding
43	NC_020062	CCTGGG	2	12	1768435	1768446	0 %	16.67 %	50 %	33.33 %	Non-Coding
44	NC_020062	ATGCAT	2	12	1843542	1843553	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
45	NC_020062	CAAAAG	2	12	1860641	1860652	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
46	NC_020062	GACGAT	2	12	1891137	1891148	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
47	NC_020062	GCCGGC	2	12	2010983	2010994	0 %	0 %	50 %	50 %	Non-Coding
48	NC_020062	GGAAAT	2	12	2013241	2013252	50 %	16.67 %	33.33 %	0 %	Non-Coding
49	NC_020062	GACCCT	2	12	2032977	2032988	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
50	NC_020062	CGGCCG	2	12	2037143	2037154	0 %	0 %	50 %	50 %	Non-Coding
51	NC_020062	GCCGTC	2	12	2046867	2046878	0 %	16.67 %	33.33 %	50 %	Non-Coding
52	NC_020062	GTTTTG	2	12	2071078	2071089	0 %	66.67 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.