MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b

Total Repeats: 45

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_020061	CGAATG	2	12	70645	70656	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
2	NC_020061	AGGCGA	2	12	89243	89254	33.33 %	0 %	50 %	16.67 %	Non-Coding
3	NC_020061	CGATGG	2	12	103086	103097	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
4	NC_020061	TGAATC	2	12	103342	103353	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
5	NC_020061	TGTCCA	2	12	111891	111902	16.67 %	33.33 %	16.67 %	33.33 %	Non-Coding
6	NC_020061	AGCGGG	2	12	122170	122181	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
7	NC_020061	GATGAA	2	12	133646	133657	50 %	16.67 %	33.33 %	0 %	Non-Coding
8	NC_020061	TCAGCA	3	18	134929	134946	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
9	NC_020061	AGCAGG	2	12	135994	136005	33.33 %	0 %	50 %	16.67 %	Non-Coding
10	NC_020061	GCGAAA	2	12	136157	136168	50 %	0 %	33.33 %	16.67 %	Non-Coding
11	NC_020061	AACGCA	2	12	150899	150910	50 %	0 %	16.67 %	33.33 %	Non-Coding
12	NC_020061	AATATA	2	12	153170	153181	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_020061	CGAGGG	2	12	165030	165041	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
14	NC_020061	CGCAAA	2	12	186270	186281	50 %	0 %	16.67 %	33.33 %	Non-Coding
15	NC_020061	GCCATC	2	12	191740	191751	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
16	NC_020061	GAGCGC	2	12	200959	200970	16.67 %	0 %	50 %	33.33 %	Non-Coding
17	NC_020061	TGGCGT	2	12	214843	214854	0 %	33.33 %	50 %	16.67 %	Non-Coding
18	NC_020061	CGCCGG	2	12	226272	226283	0 %	0 %	50 %	50 %	Non-Coding
19	NC_020061	TTTTTC	2	12	229520	229531	0 %	83.33 %	0 %	16.67 %	Non-Coding
20	NC_020061	CCCTAT	2	12	250048	250059	16.67 %	33.33 %	0 %	50 %	Non-Coding
21	NC_020061	TGTCGT	2	12	251092	251103	0 %	50 %	33.33 %	16.67 %	Non-Coding
22	NC_020061	CGCGCT	2	12	315279	315290	0 %	16.67 %	33.33 %	50 %	Non-Coding
23	NC_020061	CCTTTC	2	12	317466	317477	0 %	50 %	0 %	50 %	Non-Coding
24	NC_020061	CTGAAA	2	12	318934	318945	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
25	NC_020061	CTTCAA	2	12	327569	327580	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
26	NC_020061	ATCGCG	2	12	334467	334478	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
27	NC_020061	TGGAGC	2	12	367487	367498	16.67 %	16.67 %	50 %	16.67 %	Non-Coding
28	NC_020061	CGTGTT	2	12	374677	374688	0 %	50 %	33.33 %	16.67 %	Non-Coding
29	NC_020061	TGCCGA	2	12	384975	384986	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
30	NC_020061	GTCAAG	2	12	385277	385288	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
31	NC_020061	CATTTA	2	12	395722	395733	33.33 %	50 %	0 %	16.67 %	Non-Coding
32	NC_020061	CTTCGG	2	12	396053	396064	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
33	NC_020061	TGCACG	2	12	415864	415875	16.67 %	16.67 %	33.33 %	33.33 %	Non-Coding
34	NC_020061	CGATTT	2	12	445043	445054	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
35	NC_020061	TGAATC	2	12	456599	456610	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
36	NC_020061	CTTCGG	2	12	456647	456658	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
37	NC_020061	CGGCGT	2	12	476138	476149	0 %	16.67 %	50 %	33.33 %	Non-Coding
38	NC_020061	AAGTCG	2	12	485922	485933	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
39	NC_020061	TCGAGA	2	12	488538	488549	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
40	NC_020061	AGATCG	2	12	495384	495395	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
41	NC_020061	GTTCGC	2	12	512333	512344	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
42	NC_020061	AATGGA	2	12	513653	513664	50 %	16.67 %	33.33 %	0 %	Non-Coding
43	NC_020061	AGTCGA	2	12	513968	513979	33.33 %	16.67 %	33.33 %	16.67 %	Non-Coding
44	NC_020061	CGTGGT	2	12	514133	514144	0 %	33.33 %	50 %	16.67 %	Non-Coding
45	NC_020061	GCCTCA	2	12	520249	520260	16.67 %	16.67 %	16.67 %	50 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.