Penta-nucleotide Repeats of Rhizobium tropici CIAT 899 plasmid pRtrCIAT899a
Total Repeats: 156
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_020060 | GGGAG | 2 | 10 | 3426 | 3435 | 20 % | 0 % | 80 % | 0 % | Non-Coding |
2 | NC_020060 | CCGAC | 2 | 10 | 3988 | 3997 | 20 % | 0 % | 20 % | 60 % | 440228571 |
3 | NC_020060 | GGTCT | 2 | 10 | 4199 | 4208 | 0 % | 40 % | 40 % | 20 % | 440228571 |
4 | NC_020060 | AGGGG | 2 | 10 | 4733 | 4742 | 20 % | 0 % | 80 % | 0 % | 440228571 |
5 | NC_020060 | GGCGC | 2 | 10 | 4921 | 4930 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
6 | NC_020060 | CGGCG | 2 | 10 | 5094 | 5103 | 0 % | 0 % | 60 % | 40 % | 440228572 |
7 | NC_020060 | AGGGC | 2 | 10 | 5612 | 5621 | 20 % | 0 % | 60 % | 20 % | 440228572 |
8 | NC_020060 | TCCGG | 2 | 10 | 7230 | 7239 | 0 % | 20 % | 40 % | 40 % | 440228574 |
9 | NC_020060 | CATCG | 2 | 10 | 7246 | 7255 | 20 % | 20 % | 20 % | 40 % | 440228574 |
10 | NC_020060 | GCGCG | 2 | 10 | 9299 | 9308 | 0 % | 0 % | 60 % | 40 % | 440228576 |
11 | NC_020060 | CCGAT | 2 | 10 | 11703 | 11712 | 20 % | 20 % | 20 % | 40 % | 440228578 |
12 | NC_020060 | GTTCC | 2 | 10 | 15192 | 15201 | 0 % | 40 % | 20 % | 40 % | 440228581 |
13 | NC_020060 | CCTGG | 2 | 10 | 17493 | 17502 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
14 | NC_020060 | CAAGG | 2 | 10 | 18946 | 18955 | 40 % | 0 % | 40 % | 20 % | 440228585 |
15 | NC_020060 | CGACG | 2 | 10 | 19756 | 19765 | 20 % | 0 % | 40 % | 40 % | 440228586 |
16 | NC_020060 | GTGGC | 2 | 10 | 24601 | 24610 | 0 % | 20 % | 60 % | 20 % | 440228592 |
17 | NC_020060 | CAGGC | 2 | 10 | 24981 | 24990 | 20 % | 0 % | 40 % | 40 % | 440228593 |
18 | NC_020060 | CAAAG | 2 | 10 | 25342 | 25351 | 60 % | 0 % | 20 % | 20 % | 440228593 |
19 | NC_020060 | TCCCG | 2 | 10 | 26152 | 26161 | 0 % | 20 % | 20 % | 60 % | 440228593 |
20 | NC_020060 | AGCGA | 2 | 10 | 26237 | 26246 | 40 % | 0 % | 40 % | 20 % | 440228593 |
21 | NC_020060 | TCCGA | 2 | 10 | 26504 | 26513 | 20 % | 20 % | 20 % | 40 % | 440228593 |
22 | NC_020060 | CGAAA | 2 | 10 | 27337 | 27346 | 60 % | 0 % | 20 % | 20 % | 440228594 |
23 | NC_020060 | TGCGC | 2 | 10 | 27661 | 27670 | 0 % | 20 % | 40 % | 40 % | 440228594 |
24 | NC_020060 | AAACC | 2 | 10 | 27761 | 27770 | 60 % | 0 % | 0 % | 40 % | 440228594 |
25 | NC_020060 | GAATT | 2 | 10 | 27795 | 27804 | 40 % | 40 % | 20 % | 0 % | 440228594 |
26 | NC_020060 | AAGCC | 2 | 10 | 35001 | 35010 | 40 % | 0 % | 20 % | 40 % | 440228601 |
27 | NC_020060 | TGCTT | 2 | 10 | 35278 | 35287 | 0 % | 60 % | 20 % | 20 % | 440228601 |
28 | NC_020060 | ATCGT | 2 | 10 | 41121 | 41130 | 20 % | 40 % | 20 % | 20 % | 440228607 |
29 | NC_020060 | CAAGG | 2 | 10 | 42156 | 42165 | 40 % | 0 % | 40 % | 20 % | 440228608 |
30 | NC_020060 | TCCTC | 2 | 10 | 44023 | 44032 | 0 % | 40 % | 0 % | 60 % | 440228609 |
31 | NC_020060 | GGCGC | 2 | 10 | 46629 | 46638 | 0 % | 0 % | 60 % | 40 % | 440228611 |
32 | NC_020060 | TGCTT | 2 | 10 | 47207 | 47216 | 0 % | 60 % | 20 % | 20 % | 440228611 |
33 | NC_020060 | CGGAA | 2 | 10 | 48099 | 48108 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
34 | NC_020060 | AGAAC | 2 | 10 | 48421 | 48430 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
35 | NC_020060 | AGCCC | 2 | 10 | 50338 | 50347 | 20 % | 0 % | 20 % | 60 % | 440228613 |
36 | NC_020060 | GCGAT | 2 | 10 | 51473 | 51482 | 20 % | 20 % | 40 % | 20 % | 440228615 |
37 | NC_020060 | GCTTT | 2 | 10 | 51926 | 51935 | 0 % | 60 % | 20 % | 20 % | 440228615 |
38 | NC_020060 | ATGTC | 2 | 10 | 53784 | 53793 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
39 | NC_020060 | TGAGT | 2 | 10 | 55089 | 55098 | 20 % | 40 % | 40 % | 0 % | Non-Coding |
40 | NC_020060 | GCAGG | 2 | 10 | 57269 | 57278 | 20 % | 0 % | 60 % | 20 % | 440228620 |
41 | NC_020060 | TCAAT | 2 | 10 | 57357 | 57366 | 40 % | 40 % | 0 % | 20 % | 440228620 |
42 | NC_020060 | TTCAT | 2 | 10 | 59913 | 59922 | 20 % | 60 % | 0 % | 20 % | 440228624 |
43 | NC_020060 | GATCG | 2 | 10 | 60465 | 60474 | 20 % | 20 % | 40 % | 20 % | 440228625 |
44 | NC_020060 | ATTTT | 2 | 10 | 61091 | 61100 | 20 % | 80 % | 0 % | 0 % | 440228626 |
45 | NC_020060 | TCCAT | 2 | 10 | 62497 | 62506 | 20 % | 40 % | 0 % | 40 % | 440228628 |
46 | NC_020060 | CCGCG | 2 | 10 | 64880 | 64889 | 0 % | 0 % | 40 % | 60 % | 440228631 |
47 | NC_020060 | GCAAA | 2 | 10 | 68389 | 68398 | 60 % | 0 % | 20 % | 20 % | 440228634 |
48 | NC_020060 | CAATC | 2 | 10 | 69073 | 69082 | 40 % | 20 % | 0 % | 40 % | 440228635 |
49 | NC_020060 | TCGGC | 2 | 10 | 70894 | 70903 | 0 % | 20 % | 40 % | 40 % | 440228637 |
50 | NC_020060 | GGATC | 2 | 10 | 75665 | 75674 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
51 | NC_020060 | ACGGA | 2 | 10 | 76112 | 76121 | 40 % | 0 % | 40 % | 20 % | 440228643 |
52 | NC_020060 | GCAAG | 2 | 10 | 77395 | 77404 | 40 % | 0 % | 40 % | 20 % | 440228645 |
53 | NC_020060 | CTTCG | 2 | 10 | 77763 | 77772 | 0 % | 40 % | 20 % | 40 % | 440228645 |
54 | NC_020060 | GATGA | 2 | 10 | 78346 | 78355 | 40 % | 20 % | 40 % | 0 % | 440228645 |
55 | NC_020060 | CGCGA | 2 | 10 | 81672 | 81681 | 20 % | 0 % | 40 % | 40 % | 440228647 |
56 | NC_020060 | CTCGC | 2 | 10 | 81889 | 81898 | 0 % | 20 % | 20 % | 60 % | 440228647 |
57 | NC_020060 | GCGGG | 2 | 10 | 83997 | 84006 | 0 % | 0 % | 80 % | 20 % | Non-Coding |
58 | NC_020060 | CGGCG | 2 | 10 | 86280 | 86289 | 0 % | 0 % | 60 % | 40 % | 440228651 |
59 | NC_020060 | TTTGA | 2 | 10 | 89370 | 89379 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
60 | NC_020060 | CAGAT | 2 | 10 | 89726 | 89735 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
61 | NC_020060 | GCAGA | 2 | 10 | 93415 | 93424 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
62 | NC_020060 | GGCGA | 2 | 10 | 94378 | 94387 | 20 % | 0 % | 60 % | 20 % | 440228658 |
63 | NC_020060 | TGGCC | 2 | 10 | 96719 | 96728 | 0 % | 20 % | 40 % | 40 % | 440228661 |
64 | NC_020060 | GAGTG | 2 | 10 | 97124 | 97133 | 20 % | 20 % | 60 % | 0 % | 440228662 |
65 | NC_020060 | GGTCG | 2 | 10 | 97979 | 97988 | 0 % | 20 % | 60 % | 20 % | Non-Coding |
66 | NC_020060 | CGATG | 2 | 10 | 98124 | 98133 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
67 | NC_020060 | CCGCA | 2 | 10 | 98162 | 98171 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
68 | NC_020060 | CGGGA | 2 | 10 | 98510 | 98519 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
69 | NC_020060 | AGCGG | 2 | 10 | 101656 | 101665 | 20 % | 0 % | 60 % | 20 % | 440228665 |
70 | NC_020060 | CGATC | 2 | 10 | 101860 | 101869 | 20 % | 20 % | 20 % | 40 % | 440228665 |
71 | NC_020060 | GGCAG | 2 | 10 | 102140 | 102149 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
72 | NC_020060 | AACCC | 2 | 10 | 102546 | 102555 | 40 % | 0 % | 0 % | 60 % | 440228666 |
73 | NC_020060 | GGGCT | 2 | 10 | 103044 | 103053 | 0 % | 20 % | 60 % | 20 % | 440228666 |
74 | NC_020060 | CGAGA | 2 | 10 | 103471 | 103480 | 40 % | 0 % | 40 % | 20 % | 440228667 |
75 | NC_020060 | GGCGA | 2 | 10 | 104098 | 104107 | 20 % | 0 % | 60 % | 20 % | 440228667 |
76 | NC_020060 | GCTGT | 2 | 10 | 107044 | 107053 | 0 % | 40 % | 40 % | 20 % | 440228670 |
77 | NC_020060 | CAATC | 2 | 10 | 107213 | 107222 | 40 % | 20 % | 0 % | 40 % | 440228670 |
78 | NC_020060 | CGTAT | 2 | 10 | 107708 | 107717 | 20 % | 40 % | 20 % | 20 % | 440228670 |
79 | NC_020060 | CGACA | 2 | 10 | 110300 | 110309 | 40 % | 0 % | 20 % | 40 % | 440228673 |
80 | NC_020060 | CGGCG | 2 | 10 | 111211 | 111220 | 0 % | 0 % | 60 % | 40 % | 440228674 |
81 | NC_020060 | GATGG | 2 | 10 | 111766 | 111775 | 20 % | 20 % | 60 % | 0 % | 440228674 |
82 | NC_020060 | CTTGC | 2 | 10 | 111955 | 111964 | 0 % | 40 % | 20 % | 40 % | 440228675 |
83 | NC_020060 | CAACG | 2 | 10 | 117532 | 117541 | 40 % | 0 % | 20 % | 40 % | 440228680 |
84 | NC_020060 | TCGGG | 2 | 10 | 118218 | 118227 | 0 % | 20 % | 60 % | 20 % | 440228680 |
85 | NC_020060 | GCGCG | 2 | 10 | 118787 | 118796 | 0 % | 0 % | 60 % | 40 % | 440228681 |
86 | NC_020060 | CCTGT | 2 | 10 | 123619 | 123628 | 0 % | 40 % | 20 % | 40 % | 440228686 |
87 | NC_020060 | CGACC | 2 | 10 | 123831 | 123840 | 20 % | 0 % | 20 % | 60 % | 440228686 |
88 | NC_020060 | GCTCG | 2 | 10 | 123921 | 123930 | 0 % | 20 % | 40 % | 40 % | 440228686 |
89 | NC_020060 | TTCCG | 2 | 10 | 127627 | 127636 | 0 % | 40 % | 20 % | 40 % | 440228691 |
90 | NC_020060 | TGACG | 2 | 10 | 128752 | 128761 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
91 | NC_020060 | GGTGA | 2 | 10 | 128918 | 128927 | 20 % | 20 % | 60 % | 0 % | Non-Coding |
92 | NC_020060 | TGGCC | 2 | 10 | 129368 | 129377 | 0 % | 20 % | 40 % | 40 % | 440228692 |
93 | NC_020060 | TCGTC | 2 | 10 | 131672 | 131681 | 0 % | 40 % | 20 % | 40 % | 440228693 |
94 | NC_020060 | GCCAT | 2 | 10 | 135636 | 135645 | 20 % | 20 % | 20 % | 40 % | 440228698 |
95 | NC_020060 | GGTGA | 2 | 10 | 137787 | 137796 | 20 % | 20 % | 60 % | 0 % | Non-Coding |
96 | NC_020060 | GCCCA | 2 | 10 | 139645 | 139654 | 20 % | 0 % | 20 % | 60 % | 440228703 |
97 | NC_020060 | AACCG | 2 | 10 | 141337 | 141346 | 40 % | 0 % | 20 % | 40 % | 440228704 |
98 | NC_020060 | CCTCC | 2 | 10 | 142160 | 142169 | 0 % | 20 % | 0 % | 80 % | 440228705 |
99 | NC_020060 | CAGGA | 2 | 10 | 143412 | 143421 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
100 | NC_020060 | GAACC | 2 | 10 | 143691 | 143700 | 40 % | 0 % | 20 % | 40 % | 440228706 |
101 | NC_020060 | CGCGA | 2 | 10 | 144678 | 144687 | 20 % | 0 % | 40 % | 40 % | 440228707 |
102 | NC_020060 | GCGTC | 2 | 10 | 146136 | 146145 | 0 % | 20 % | 40 % | 40 % | 440228708 |
103 | NC_020060 | CCTCT | 2 | 10 | 148491 | 148500 | 0 % | 40 % | 0 % | 60 % | 440228711 |
104 | NC_020060 | GGTCA | 2 | 10 | 149117 | 149126 | 20 % | 20 % | 40 % | 20 % | 440228712 |
105 | NC_020060 | CCAGC | 2 | 10 | 156051 | 156060 | 20 % | 0 % | 20 % | 60 % | 440228718 |
106 | NC_020060 | CGGGG | 2 | 10 | 158272 | 158281 | 0 % | 0 % | 80 % | 20 % | 440228719 |
107 | NC_020060 | CAGCG | 2 | 10 | 158438 | 158447 | 20 % | 0 % | 40 % | 40 % | 440228719 |
108 | NC_020060 | GCTGG | 2 | 10 | 158834 | 158843 | 0 % | 20 % | 60 % | 20 % | 440228719 |
109 | NC_020060 | ATCCC | 2 | 10 | 162246 | 162255 | 20 % | 20 % | 0 % | 60 % | 440228721 |
110 | NC_020060 | AATTG | 2 | 10 | 162712 | 162721 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
111 | NC_020060 | CCGAT | 2 | 10 | 164003 | 164012 | 20 % | 20 % | 20 % | 40 % | 440228723 |
112 | NC_020060 | TCAAT | 2 | 10 | 164993 | 165002 | 40 % | 40 % | 0 % | 20 % | 440228723 |
113 | NC_020060 | CGGCG | 2 | 10 | 165528 | 165537 | 0 % | 0 % | 60 % | 40 % | 440228724 |
114 | NC_020060 | ATGAG | 2 | 10 | 167009 | 167018 | 40 % | 20 % | 40 % | 0 % | 440228725 |
115 | NC_020060 | GCGAG | 2 | 10 | 168978 | 168987 | 20 % | 0 % | 60 % | 20 % | 440228727 |
116 | NC_020060 | GAAGA | 2 | 10 | 173102 | 173111 | 60 % | 0 % | 40 % | 0 % | 440228733 |
117 | NC_020060 | AGGGC | 2 | 10 | 175119 | 175128 | 20 % | 0 % | 60 % | 20 % | 440228735 |
118 | NC_020060 | ACCAC | 2 | 10 | 176579 | 176588 | 40 % | 0 % | 0 % | 60 % | 440228735 |
119 | NC_020060 | ACGCC | 2 | 10 | 177252 | 177261 | 20 % | 0 % | 20 % | 60 % | 440228735 |
120 | NC_020060 | GCCGT | 2 | 10 | 177874 | 177883 | 0 % | 20 % | 40 % | 40 % | 440228735 |
121 | NC_020060 | CGGCC | 2 | 10 | 181266 | 181275 | 0 % | 0 % | 40 % | 60 % | 440228737 |
122 | NC_020060 | GGCGA | 2 | 10 | 181930 | 181939 | 20 % | 0 % | 60 % | 20 % | 440228737 |
123 | NC_020060 | GAGGC | 2 | 10 | 183758 | 183767 | 20 % | 0 % | 60 % | 20 % | 440228739 |
124 | NC_020060 | GTTTC | 2 | 10 | 184627 | 184636 | 0 % | 60 % | 20 % | 20 % | 440228741 |
125 | NC_020060 | TCCTC | 2 | 10 | 184955 | 184964 | 0 % | 40 % | 0 % | 60 % | 440228741 |
126 | NC_020060 | ATGAA | 2 | 10 | 185631 | 185640 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
127 | NC_020060 | CGTTC | 2 | 10 | 185665 | 185674 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
128 | NC_020060 | GGACA | 2 | 10 | 187041 | 187050 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
129 | NC_020060 | CCCCG | 2 | 10 | 187608 | 187617 | 0 % | 0 % | 20 % | 80 % | 440228745 |
130 | NC_020060 | TCTCT | 2 | 10 | 188311 | 188320 | 0 % | 60 % | 0 % | 40 % | Non-Coding |
131 | NC_020060 | GCCCC | 2 | 10 | 192032 | 192041 | 0 % | 0 % | 20 % | 80 % | 440228751 |
132 | NC_020060 | ATCCG | 2 | 10 | 194050 | 194059 | 20 % | 20 % | 20 % | 40 % | 440228754 |
133 | NC_020060 | CCCAA | 2 | 10 | 196028 | 196037 | 40 % | 0 % | 0 % | 60 % | 440228754 |
134 | NC_020060 | CGGAA | 2 | 10 | 196420 | 196429 | 40 % | 0 % | 40 % | 20 % | 440228754 |
135 | NC_020060 | TCCGG | 2 | 10 | 197112 | 197121 | 0 % | 20 % | 40 % | 40 % | 440228755 |
136 | NC_020060 | TGATT | 2 | 10 | 198029 | 198038 | 20 % | 60 % | 20 % | 0 % | 440228756 |
137 | NC_020060 | GCCAA | 2 | 10 | 198537 | 198546 | 40 % | 0 % | 20 % | 40 % | 440228756 |
138 | NC_020060 | CAGCG | 2 | 10 | 199568 | 199577 | 20 % | 0 % | 40 % | 40 % | 440228758 |
139 | NC_020060 | GCGCC | 2 | 10 | 200298 | 200307 | 0 % | 0 % | 40 % | 60 % | 440228759 |
140 | NC_020060 | GACTT | 2 | 10 | 200582 | 200591 | 20 % | 40 % | 20 % | 20 % | 440228759 |
141 | NC_020060 | ATGCT | 2 | 10 | 203764 | 203773 | 20 % | 40 % | 20 % | 20 % | 440228763 |
142 | NC_020060 | TGACG | 2 | 10 | 204665 | 204674 | 20 % | 20 % | 40 % | 20 % | 440228765 |
143 | NC_020060 | GCTGT | 2 | 10 | 205062 | 205071 | 0 % | 40 % | 40 % | 20 % | 440228766 |
144 | NC_020060 | TGCGG | 2 | 10 | 205130 | 205139 | 0 % | 20 % | 60 % | 20 % | 440228766 |
145 | NC_020060 | TCCGA | 2 | 10 | 206219 | 206228 | 20 % | 20 % | 20 % | 40 % | 440228767 |
146 | NC_020060 | CCCTC | 2 | 10 | 208768 | 208777 | 0 % | 20 % | 0 % | 80 % | 440228770 |
147 | NC_020060 | CTGCG | 2 | 10 | 208892 | 208901 | 0 % | 20 % | 40 % | 40 % | 440228770 |
148 | NC_020060 | CGGAT | 2 | 10 | 209682 | 209691 | 20 % | 20 % | 40 % | 20 % | 440228770 |
149 | NC_020060 | CTCCC | 2 | 10 | 209753 | 209762 | 0 % | 20 % | 0 % | 80 % | 440228770 |
150 | NC_020060 | GTTGC | 2 | 10 | 210605 | 210614 | 0 % | 40 % | 40 % | 20 % | 440228771 |
151 | NC_020060 | CCGCT | 2 | 10 | 210650 | 210659 | 0 % | 20 % | 20 % | 60 % | 440228772 |
152 | NC_020060 | CCCAG | 2 | 10 | 212512 | 212521 | 20 % | 0 % | 20 % | 60 % | 440228774 |
153 | NC_020060 | TCTTA | 2 | 10 | 213192 | 213201 | 20 % | 60 % | 0 % | 20 % | 440228775 |
154 | NC_020060 | AGTCA | 2 | 10 | 213723 | 213732 | 40 % | 20 % | 20 % | 20 % | 440228775 |
155 | NC_020060 | CCCTC | 2 | 10 | 214851 | 214860 | 0 % | 20 % | 0 % | 80 % | 440228776 |
156 | NC_020060 | AAAAG | 2 | 10 | 215248 | 215257 | 80 % | 0 % | 20 % | 0 % | Non-Coding |