Hexa-nucleotide Repeats of Sinorhizobium meliloti GR4 plasmid pRmeGR4b
Total Repeats: 68
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_019847 | CACCGT | 2 | 12 | 8294 | 8305 | 16.67 % | 16.67 % | 16.67 % | 50 % | 433615309 |
2 | NC_019847 | TCGGGT | 2 | 12 | 13233 | 13244 | 0 % | 33.33 % | 50 % | 16.67 % | 433615311 |
3 | NC_019847 | TCCTCA | 5 | 30 | 13755 | 13784 | 16.67 % | 33.33 % | 0 % | 50 % | 433615311 |
4 | NC_019847 | CGAGAG | 2 | 12 | 17285 | 17296 | 33.33 % | 0 % | 50 % | 16.67 % | Non-Coding |
5 | NC_019847 | GATCTT | 2 | 12 | 17343 | 17354 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
6 | NC_019847 | AGCGCA | 2 | 12 | 23383 | 23394 | 33.33 % | 0 % | 33.33 % | 33.33 % | 433615317 |
7 | NC_019847 | GCCGCT | 2 | 12 | 26633 | 26644 | 0 % | 16.67 % | 33.33 % | 50 % | 433615321 |
8 | NC_019847 | TCGACA | 2 | 12 | 27231 | 27242 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 433615321 |
9 | NC_019847 | CGAAGC | 2 | 12 | 28876 | 28887 | 33.33 % | 0 % | 33.33 % | 33.33 % | 433615323 |
10 | NC_019847 | TTCGTC | 2 | 12 | 30579 | 30590 | 0 % | 50 % | 16.67 % | 33.33 % | Non-Coding |
11 | NC_019847 | GATGCC | 2 | 12 | 30946 | 30957 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 433615326 |
12 | NC_019847 | AATCTC | 2 | 12 | 33301 | 33312 | 33.33 % | 33.33 % | 0 % | 33.33 % | 433615329 |
13 | NC_019847 | CCTTTG | 2 | 12 | 35204 | 35215 | 0 % | 50 % | 16.67 % | 33.33 % | 433615332 |
14 | NC_019847 | AGGAAC | 2 | 12 | 36972 | 36983 | 50 % | 0 % | 33.33 % | 16.67 % | 433615334 |
15 | NC_019847 | GAACAC | 2 | 12 | 40574 | 40585 | 50 % | 0 % | 16.67 % | 33.33 % | 433615339 |
16 | NC_019847 | CAATCT | 2 | 12 | 40794 | 40805 | 33.33 % | 33.33 % | 0 % | 33.33 % | 433615340 |
17 | NC_019847 | CCTCGA | 2 | 12 | 42689 | 42700 | 16.67 % | 16.67 % | 16.67 % | 50 % | 433615341 |
18 | NC_019847 | CAGCTC | 2 | 12 | 46046 | 46057 | 16.67 % | 16.67 % | 16.67 % | 50 % | 433615344 |
19 | NC_019847 | CGTCAT | 2 | 12 | 50624 | 50635 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | Non-Coding |
20 | NC_019847 | ATGGTT | 2 | 12 | 52489 | 52500 | 16.67 % | 50 % | 33.33 % | 0 % | 433615350 |
21 | NC_019847 | CCGCAG | 2 | 12 | 60769 | 60780 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
22 | NC_019847 | GCCGTT | 2 | 12 | 63244 | 63255 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
23 | NC_019847 | GCGCCG | 2 | 12 | 66697 | 66708 | 0 % | 0 % | 50 % | 50 % | 433615366 |
24 | NC_019847 | GCCGGT | 2 | 12 | 67157 | 67168 | 0 % | 16.67 % | 50 % | 33.33 % | 433615366 |
25 | NC_019847 | TTCGGC | 2 | 12 | 70043 | 70054 | 0 % | 33.33 % | 33.33 % | 33.33 % | 433615368 |
26 | NC_019847 | GCGATC | 2 | 12 | 72109 | 72120 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 433615369 |
27 | NC_019847 | CGAAGC | 2 | 12 | 88270 | 88281 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
28 | NC_019847 | CATCCA | 2 | 12 | 91571 | 91582 | 33.33 % | 16.67 % | 0 % | 50 % | 433615397 |
29 | NC_019847 | CAGGCG | 2 | 12 | 95436 | 95447 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
30 | NC_019847 | GCAGTC | 2 | 12 | 101265 | 101276 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 433615409 |
31 | NC_019847 | ATCCGC | 2 | 12 | 108219 | 108230 | 16.67 % | 16.67 % | 16.67 % | 50 % | 433615418 |
32 | NC_019847 | GCTTCC | 2 | 12 | 109204 | 109215 | 0 % | 33.33 % | 16.67 % | 50 % | Non-Coding |
33 | NC_019847 | CTATGC | 2 | 12 | 112448 | 112459 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 433615424 |
34 | NC_019847 | GAAGCC | 2 | 12 | 118481 | 118492 | 33.33 % | 0 % | 33.33 % | 33.33 % | 433615431 |
35 | NC_019847 | CAATCC | 2 | 12 | 128864 | 128875 | 33.33 % | 16.67 % | 0 % | 50 % | 433615442 |
36 | NC_019847 | GCCCGC | 2 | 12 | 129556 | 129567 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
37 | NC_019847 | AGGCGC | 2 | 12 | 130737 | 130748 | 16.67 % | 0 % | 50 % | 33.33 % | 433615444 |
38 | NC_019847 | TGGTTT | 2 | 12 | 139636 | 139647 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
39 | NC_019847 | GGGCAT | 2 | 12 | 147528 | 147539 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
40 | NC_019847 | GGGTGG | 2 | 12 | 148405 | 148416 | 0 % | 16.67 % | 83.33 % | 0 % | Non-Coding |
41 | NC_019847 | TCGGCA | 2 | 12 | 159931 | 159942 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 433615473 |
42 | NC_019847 | TGCCGC | 2 | 12 | 160059 | 160070 | 0 % | 16.67 % | 33.33 % | 50 % | 433615473 |
43 | NC_019847 | GACGAA | 2 | 12 | 162184 | 162195 | 50 % | 0 % | 33.33 % | 16.67 % | 433615475 |
44 | NC_019847 | GCGTCC | 2 | 12 | 163777 | 163788 | 0 % | 16.67 % | 33.33 % | 50 % | 433615476 |
45 | NC_019847 | GCGCCC | 2 | 12 | 163791 | 163802 | 0 % | 0 % | 33.33 % | 66.67 % | 433615476 |
46 | NC_019847 | CTGCCG | 2 | 12 | 170446 | 170457 | 0 % | 16.67 % | 33.33 % | 50 % | 433615486 |
47 | NC_019847 | TATCGT | 2 | 12 | 171774 | 171785 | 16.67 % | 50 % | 16.67 % | 16.67 % | 433615487 |
48 | NC_019847 | AAATCG | 2 | 12 | 172023 | 172034 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
49 | NC_019847 | GCCAAG | 2 | 12 | 173423 | 173434 | 33.33 % | 0 % | 33.33 % | 33.33 % | 433615491 |
50 | NC_019847 | GACGGC | 2 | 12 | 175689 | 175700 | 16.67 % | 0 % | 50 % | 33.33 % | 433615493 |
51 | NC_019847 | CCAGAG | 2 | 12 | 175953 | 175964 | 33.33 % | 0 % | 33.33 % | 33.33 % | 433615493 |
52 | NC_019847 | TTGCCG | 2 | 12 | 180153 | 180164 | 0 % | 33.33 % | 33.33 % | 33.33 % | 433615498 |
53 | NC_019847 | ACGCAC | 2 | 12 | 182572 | 182583 | 33.33 % | 0 % | 16.67 % | 50 % | 433615501 |
54 | NC_019847 | ACCGTG | 2 | 12 | 184179 | 184190 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 433615502 |
55 | NC_019847 | TGGCGC | 2 | 12 | 191551 | 191562 | 0 % | 16.67 % | 50 % | 33.33 % | 433615509 |
56 | NC_019847 | TCAGCA | 2 | 12 | 191926 | 191937 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 433615509 |
57 | NC_019847 | AGCCCG | 2 | 12 | 195718 | 195729 | 16.67 % | 0 % | 33.33 % | 50 % | 433615512 |
58 | NC_019847 | CTGCAG | 2 | 12 | 198009 | 198020 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 433615517 |
59 | NC_019847 | AAGGAG | 2 | 12 | 200267 | 200278 | 50 % | 0 % | 50 % | 0 % | 433615518 |
60 | NC_019847 | CGTGGA | 2 | 12 | 200943 | 200954 | 16.67 % | 16.67 % | 50 % | 16.67 % | 433615519 |
61 | NC_019847 | GCGTCG | 2 | 12 | 207333 | 207344 | 0 % | 16.67 % | 50 % | 33.33 % | 433615525 |
62 | NC_019847 | TATGGG | 2 | 12 | 207616 | 207627 | 16.67 % | 33.33 % | 50 % | 0 % | 433615525 |
63 | NC_019847 | CCTGCT | 2 | 12 | 210060 | 210071 | 0 % | 33.33 % | 16.67 % | 50 % | 433615528 |
64 | NC_019847 | GCCCGC | 2 | 12 | 214387 | 214398 | 0 % | 0 % | 33.33 % | 66.67 % | 433615534 |
65 | NC_019847 | GTCGCC | 2 | 12 | 214432 | 214443 | 0 % | 16.67 % | 33.33 % | 50 % | 433615534 |
66 | NC_019847 | GATCAG | 2 | 12 | 214857 | 214868 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 433615535 |
67 | NC_019847 | CCGCAG | 2 | 12 | 223226 | 223237 | 16.67 % | 0 % | 33.33 % | 50 % | 433615543 |
68 | NC_019847 | ATGTCG | 2 | 12 | 224932 | 224943 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 433615545 |