MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Cylindrospermum stagnale PCC 7417 plasmid pCYLST.03

Total Repeats: 51

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_019758	AAC	2	6	11	16	66.67 %	0 %	0 %	33.33 %	Non-Coding
2	NC_019758	ATT	2	6	3312	3317	33.33 %	66.67 %	0 %	0 %	Non-Coding
3	NC_019758	CAA	2	6	3355	3360	66.67 %	0 %	0 %	33.33 %	Non-Coding
4	NC_019758	CAA	2	6	3447	3452	66.67 %	0 %	0 %	33.33 %	Non-Coding
5	NC_019758	CAA	2	6	3539	3544	66.67 %	0 %	0 %	33.33 %	Non-Coding
6	NC_019758	CAA	2	6	3631	3636	66.67 %	0 %	0 %	33.33 %	Non-Coding
7	NC_019758	CAA	2	6	6557	6562	66.67 %	0 %	0 %	33.33 %	Non-Coding
8	NC_019758	ATT	2	6	6594	6599	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_019758	ACT	2	6	6611	6616	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
10	NC_019758	CGC	2	6	8520	8525	0 %	0 %	33.33 %	66.67 %	Non-Coding
11	NC_019758	GTT	2	6	8641	8646	0 %	66.67 %	33.33 %	0 %	Non-Coding
12	NC_019758	AGC	2	6	8913	8918	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
13	NC_019758	CTT	2	6	10244	10249	0 %	66.67 %	0 %	33.33 %	Non-Coding
14	NC_019758	TTC	2	6	10286	10291	0 %	66.67 %	0 %	33.33 %	Non-Coding
15	NC_019758	TAA	2	6	10313	10318	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_019758	ACT	2	6	10881	10886	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
17	NC_019758	ATT	2	6	10917	10922	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_019758	ATA	2	6	10946	10951	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_019758	GTA	2	6	10958	10963	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
20	NC_019758	CTT	2	6	11073	11078	0 %	66.67 %	0 %	33.33 %	Non-Coding
21	NC_019758	ATA	2	6	11079	11084	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_019758	GTA	2	6	11142	11147	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
23	NC_019758	GCT	2	6	11219	11224	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
24	NC_019758	GTA	2	6	11532	11537	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
25	NC_019758	AAT	2	6	11638	11643	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_019758	TGA	2	6	11680	11685	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
27	NC_019758	TTA	2	6	11800	11805	33.33 %	66.67 %	0 %	0 %	Non-Coding
28	NC_019758	ATT	2	6	11819	11824	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_019758	AAT	2	6	12321	12326	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_019758	TAA	2	6	12340	12345	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_019758	TCA	2	6	12460	12465	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_019758	TAT	2	6	12501	12506	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_019758	TAC	2	6	12608	12613	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
34	NC_019758	ATA	2	6	12614	12619	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_019758	ATA	2	6	12891	12896	66.67 %	33.33 %	0 %	0 %	Non-Coding
36	NC_019758	GTC	2	6	13111	13116	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
37	NC_019758	CTT	2	6	13304	13309	0 %	66.67 %	0 %	33.33 %	Non-Coding
38	NC_019758	CCA	2	6	13311	13316	33.33 %	0 %	0 %	66.67 %	Non-Coding
39	NC_019758	ACT	2	6	13375	13380	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
40	NC_019758	GCT	2	6	17500	17505	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
41	NC_019758	CAG	2	6	17575	17580	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
42	NC_019758	AGT	2	6	17647	17652	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
43	NC_019758	ATA	2	6	17682	17687	66.67 %	33.33 %	0 %	0 %	Non-Coding
44	NC_019758	TCT	2	6	17705	17710	0 %	66.67 %	0 %	33.33 %	Non-Coding
45	NC_019758	CTA	2	6	18447	18452	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46	NC_019758	ATA	2	6	18474	18479	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_019758	AGT	2	6	18481	18486	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
48	NC_019758	AAC	2	6	18513	18518	66.67 %	0 %	0 %	33.33 %	Non-Coding
49	NC_019758	AGC	2	6	19297	19302	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
50	NC_019758	TAG	2	6	19308	19313	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
51	NC_019758	TGC	2	6	19314	19319	0 %	33.33 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.