MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Calothrix sp. PCC 6303 plasmid pCAL6303.03

Total Repeats: 91

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_019752	TGG	3	9	1514	1522	0 %	33.33 %	66.67 %	0 %	Non-Coding
2	NC_019752	CAT	2	6	1524	1529	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3	NC_019752	TAA	2	6	1546	1551	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_019752	TCA	2	6	1646	1651	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
5	NC_019752	TCA	2	6	2443	2448	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
6	NC_019752	CTG	2	6	2450	2455	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
7	NC_019752	CCT	2	6	2464	2469	0 %	33.33 %	0 %	66.67 %	Non-Coding
8	NC_019752	AGT	2	6	4024	4029	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
9	NC_019752	AAT	2	6	4040	4045	66.67 %	33.33 %	0 %	0 %	Non-Coding
10	NC_019752	TAA	2	6	6038	6043	66.67 %	33.33 %	0 %	0 %	Non-Coding
11	NC_019752	ATA	2	6	6107	6112	66.67 %	33.33 %	0 %	0 %	Non-Coding
12	NC_019752	ATC	2	6	6896	6901	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
13	NC_019752	AAT	2	6	6908	6913	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_019752	AAT	2	6	8491	8496	66.67 %	33.33 %	0 %	0 %	Non-Coding
15	NC_019752	GTC	2	6	8619	8624	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
16	NC_019752	TCC	2	6	8740	8745	0 %	33.33 %	0 %	66.67 %	Non-Coding
17	NC_019752	GTT	2	6	8747	8752	0 %	66.67 %	33.33 %	0 %	Non-Coding
18	NC_019752	CTT	2	6	8756	8761	0 %	66.67 %	0 %	33.33 %	Non-Coding
19	NC_019752	AAT	2	6	8803	8808	66.67 %	33.33 %	0 %	0 %	Non-Coding
20	NC_019752	CTG	2	6	8910	8915	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
21	NC_019752	TAC	2	6	8923	8928	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
22	NC_019752	TTC	2	6	9007	9012	0 %	66.67 %	0 %	33.33 %	Non-Coding
23	NC_019752	GTC	2	6	9046	9051	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
24	NC_019752	TCC	2	6	9166	9171	0 %	33.33 %	0 %	66.67 %	Non-Coding
25	NC_019752	CTT	2	6	9182	9187	0 %	66.67 %	0 %	33.33 %	Non-Coding
26	NC_019752	TAA	2	6	9196	9201	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_019752	ATA	2	6	9225	9230	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_019752	TAA	3	9	9484	9492	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_019752	ATA	2	6	9717	9722	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_019752	AAT	2	6	12794	12799	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_019752	TTG	2	6	14486	14491	0 %	66.67 %	33.33 %	0 %	Non-Coding
32	NC_019752	GCG	2	6	14507	14512	0 %	0 %	66.67 %	33.33 %	Non-Coding
33	NC_019752	GCT	2	6	14553	14558	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
34	NC_019752	GGA	2	6	14582	14587	33.33 %	0 %	66.67 %	0 %	Non-Coding
35	NC_019752	TTG	2	6	15940	15945	0 %	66.67 %	33.33 %	0 %	Non-Coding
36	NC_019752	GGA	2	6	16993	16998	33.33 %	0 %	66.67 %	0 %	Non-Coding
37	NC_019752	TTA	2	6	17039	17044	33.33 %	66.67 %	0 %	0 %	Non-Coding
38	NC_019752	AAT	2	6	19142	19147	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_019752	CAA	2	6	19332	19337	66.67 %	0 %	0 %	33.33 %	Non-Coding
40	NC_019752	AAG	2	6	19879	19884	66.67 %	0 %	33.33 %	0 %	Non-Coding
41	NC_019752	CAA	3	9	20037	20045	66.67 %	0 %	0 %	33.33 %	Non-Coding
42	NC_019752	TTA	2	6	20076	20081	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_019752	GTA	2	6	20090	20095	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
44	NC_019752	CCG	2	6	24509	24514	0 %	0 %	33.33 %	66.67 %	Non-Coding
45	NC_019752	CAT	2	6	24633	24638	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
46	NC_019752	ATT	2	6	24797	24802	33.33 %	66.67 %	0 %	0 %	Non-Coding
47	NC_019752	GAT	2	6	24845	24850	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
48	NC_019752	TAT	2	6	24893	24898	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_019752	ATT	2	6	24997	25002	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_019752	ATT	2	6	25082	25087	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_019752	ATT	2	6	26597	26602	33.33 %	66.67 %	0 %	0 %	Non-Coding
52	NC_019752	TAA	2	6	27158	27163	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_019752	CTT	2	6	32260	32265	0 %	66.67 %	0 %	33.33 %	Non-Coding
54	NC_019752	GTA	2	6	32276	32281	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
55	NC_019752	TCA	2	6	32384	32389	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
56	NC_019752	CAA	2	6	32468	32473	66.67 %	0 %	0 %	33.33 %	Non-Coding
57	NC_019752	CGA	2	6	32626	32631	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
58	NC_019752	CAA	2	6	32711	32716	66.67 %	0 %	0 %	33.33 %	Non-Coding
59	NC_019752	ATC	2	6	32729	32734	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
60	NC_019752	ATC	2	6	32825	32830	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
61	NC_019752	GTT	2	6	33045	33050	0 %	66.67 %	33.33 %	0 %	Non-Coding
62	NC_019752	ACA	2	6	33061	33066	66.67 %	0 %	0 %	33.33 %	Non-Coding
63	NC_019752	ACC	2	6	33256	33261	33.33 %	0 %	0 %	66.67 %	Non-Coding
64	NC_019752	TTA	2	6	33275	33280	33.33 %	66.67 %	0 %	0 %	Non-Coding
65	NC_019752	TCA	2	6	33471	33476	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
66	NC_019752	TTA	2	6	35653	35658	33.33 %	66.67 %	0 %	0 %	Non-Coding
67	NC_019752	AAG	2	6	35667	35672	66.67 %	0 %	33.33 %	0 %	Non-Coding
68	NC_019752	ATA	2	6	35751	35756	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_019752	TCT	2	6	35779	35784	0 %	66.67 %	0 %	33.33 %	Non-Coding
70	NC_019752	ATT	2	6	36072	36077	33.33 %	66.67 %	0 %	0 %	Non-Coding
71	NC_019752	TTA	2	6	36119	36124	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_019752	AGT	2	6	36187	36192	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
73	NC_019752	ATC	2	6	39229	39234	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
74	NC_019752	TGT	2	6	39284	39289	0 %	66.67 %	33.33 %	0 %	Non-Coding
75	NC_019752	CCT	2	6	39344	39349	0 %	33.33 %	0 %	66.67 %	Non-Coding
76	NC_019752	TGG	2	6	39485	39490	0 %	33.33 %	66.67 %	0 %	Non-Coding
77	NC_019752	CTA	2	6	39506	39511	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
78	NC_019752	GGC	2	6	39584	39589	0 %	0 %	66.67 %	33.33 %	Non-Coding
79	NC_019752	GAA	2	6	39635	39640	66.67 %	0 %	33.33 %	0 %	Non-Coding
80	NC_019752	TAT	2	6	39750	39755	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_019752	AAT	2	6	40762	40767	66.67 %	33.33 %	0 %	0 %	Non-Coding
82	NC_019752	TGA	2	6	43646	43651	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
83	NC_019752	TAA	2	6	43806	43811	66.67 %	33.33 %	0 %	0 %	Non-Coding
84	NC_019752	TAG	2	6	43833	43838	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
85	NC_019752	ATT	2	6	46155	46160	33.33 %	66.67 %	0 %	0 %	Non-Coding
86	NC_019752	TCT	2	6	46205	46210	0 %	66.67 %	0 %	33.33 %	Non-Coding
87	NC_019752	AAT	2	6	46222	46227	66.67 %	33.33 %	0 %	0 %	Non-Coding
88	NC_019752	TAA	2	6	46304	46309	66.67 %	33.33 %	0 %	0 %	Non-Coding
89	NC_019752	GTT	2	6	46326	46331	0 %	66.67 %	33.33 %	0 %	Non-Coding
90	NC_019752	TTA	2	6	46386	46391	33.33 %	66.67 %	0 %	0 %	Non-Coding
91	NC_019752	CTT	2	6	46437	46442	0 %	66.67 %	0 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.