Hexa-nucleotide Repeats of Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50
Total Repeats: 33
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_018651 | GGTAAT | 2 | 12 | 4792 | 4803 | 33.33 % | 33.33 % | 33.33 % | 0 % | 410485114 |
2 | NC_018651 | TCAACG | 2 | 12 | 8342 | 8353 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 410485120 |
3 | NC_018651 | AACGGC | 2 | 12 | 8808 | 8819 | 33.33 % | 0 % | 33.33 % | 33.33 % | 410485121 |
4 | NC_018651 | CTCTTT | 2 | 12 | 9254 | 9265 | 0 % | 66.67 % | 0 % | 33.33 % | 410485121 |
5 | NC_018651 | GTAGGC | 2 | 12 | 10652 | 10663 | 16.67 % | 16.67 % | 50 % | 16.67 % | 410485122 |
6 | NC_018651 | ACCATC | 2 | 12 | 12718 | 12729 | 33.33 % | 16.67 % | 0 % | 50 % | 410485124 |
7 | NC_018651 | GCACAA | 2 | 12 | 16598 | 16609 | 50 % | 0 % | 16.67 % | 33.33 % | 410485130 |
8 | NC_018651 | ATGAAA | 2 | 12 | 19602 | 19613 | 66.67 % | 16.67 % | 16.67 % | 0 % | 410485134 |
9 | NC_018651 | TAGTGT | 2 | 12 | 24187 | 24198 | 16.67 % | 50 % | 33.33 % | 0 % | 410485141 |
10 | NC_018651 | TGGCTA | 2 | 12 | 31900 | 31911 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 410485150 |
11 | NC_018651 | TCATCC | 2 | 12 | 33292 | 33303 | 16.67 % | 33.33 % | 0 % | 50 % | 410485152 |
12 | NC_018651 | AAAAAT | 2 | 12 | 42337 | 42348 | 83.33 % | 16.67 % | 0 % | 0 % | 410485168 |
13 | NC_018651 | TTTTTG | 2 | 12 | 43677 | 43688 | 0 % | 83.33 % | 16.67 % | 0 % | 410485170 |
14 | NC_018651 | ACCAAC | 2 | 12 | 50899 | 50910 | 50 % | 0 % | 0 % | 50 % | 410485180 |
15 | NC_018651 | ACCAAT | 2 | 12 | 54075 | 54086 | 50 % | 16.67 % | 0 % | 33.33 % | 410485182 |
16 | NC_018651 | TGTGGT | 2 | 12 | 58850 | 58861 | 0 % | 50 % | 50 % | 0 % | 410485186 |
17 | NC_018651 | TCATGT | 2 | 12 | 60554 | 60565 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
18 | NC_018651 | CTATTG | 2 | 12 | 61993 | 62004 | 16.67 % | 50 % | 16.67 % | 16.67 % | Non-Coding |
19 | NC_018651 | CGTTGG | 2 | 12 | 63670 | 63681 | 0 % | 33.33 % | 50 % | 16.67 % | 410485193 |
20 | NC_018651 | CGTATT | 2 | 12 | 65150 | 65161 | 16.67 % | 50 % | 16.67 % | 16.67 % | 410485196 |
21 | NC_018651 | TCTGCT | 2 | 12 | 66195 | 66206 | 0 % | 50 % | 16.67 % | 33.33 % | 410485197 |
22 | NC_018651 | TCTTTG | 2 | 12 | 67736 | 67747 | 0 % | 66.67 % | 16.67 % | 16.67 % | 410485199 |
23 | NC_018651 | AAGTCC | 2 | 12 | 73487 | 73498 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 410485204 |
24 | NC_018651 | TTGACG | 2 | 12 | 75764 | 75775 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 410485205 |
25 | NC_018651 | CTTTCA | 2 | 12 | 77692 | 77703 | 16.67 % | 50 % | 0 % | 33.33 % | 410485206 |
26 | NC_018651 | AGAGCC | 2 | 12 | 78496 | 78507 | 33.33 % | 0 % | 33.33 % | 33.33 % | 410485207 |
27 | NC_018651 | CTTCAT | 2 | 12 | 82330 | 82341 | 16.67 % | 50 % | 0 % | 33.33 % | 410485210 |
28 | NC_018651 | AATCAG | 2 | 12 | 92485 | 92496 | 50 % | 16.67 % | 16.67 % | 16.67 % | 410485221 |
29 | NC_018651 | TCAAGG | 2 | 12 | 95134 | 95145 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 410485225 |
30 | NC_018651 | CCATTT | 2 | 12 | 97812 | 97823 | 16.67 % | 50 % | 0 % | 33.33 % | 410485230 |
31 | NC_018651 | ACATTA | 2 | 12 | 100494 | 100505 | 50 % | 33.33 % | 0 % | 16.67 % | 410485230 |
32 | NC_018651 | GCATCA | 2 | 12 | 101578 | 101589 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 410485231 |
33 | NC_018651 | TGTTTT | 2 | 12 | 101931 | 101942 | 0 % | 83.33 % | 16.67 % | 0 % | 410485231 |