Penta-nucleotide Non-Coding Repeats of Chlamydia psittaci MN chromosome
Total Repeats: 132
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_018627 | ATAAA | 2 | 10 | 34280 | 34289 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
2 | NC_018627 | TCTAG | 2 | 10 | 37999 | 38008 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
3 | NC_018627 | TTTTG | 2 | 10 | 52482 | 52491 | 0 % | 80 % | 20 % | 0 % | Non-Coding |
4 | NC_018627 | TTAAT | 2 | 10 | 57962 | 57971 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
5 | NC_018627 | TCTTT | 2 | 10 | 59406 | 59415 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
6 | NC_018627 | CACTT | 2 | 10 | 71126 | 71135 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
7 | NC_018627 | AATTT | 2 | 10 | 77739 | 77748 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
8 | NC_018627 | AGGAA | 2 | 10 | 84754 | 84763 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
9 | NC_018627 | AGAAA | 2 | 10 | 87351 | 87360 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
10 | NC_018627 | AATTA | 2 | 10 | 93960 | 93969 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
11 | NC_018627 | ATTTG | 2 | 10 | 98957 | 98966 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
12 | NC_018627 | AAAAT | 2 | 10 | 99678 | 99687 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
13 | NC_018627 | CTTTT | 2 | 10 | 108359 | 108368 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
14 | NC_018627 | AGCTT | 2 | 10 | 108470 | 108479 | 20 % | 40 % | 20 % | 20 % | Non-Coding |
15 | NC_018627 | CTTTT | 2 | 10 | 122873 | 122882 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
16 | NC_018627 | TTCTT | 2 | 10 | 131356 | 131365 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
17 | NC_018627 | TTTTA | 2 | 10 | 148184 | 148193 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
18 | NC_018627 | TTTTC | 2 | 10 | 169254 | 169263 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
19 | NC_018627 | CAAAA | 2 | 10 | 173573 | 173582 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
20 | NC_018627 | CGCAT | 2 | 10 | 173943 | 173952 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
21 | NC_018627 | AATGT | 2 | 10 | 187381 | 187390 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
22 | NC_018627 | TTTTA | 2 | 10 | 193922 | 193931 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
23 | NC_018627 | TTTAT | 2 | 10 | 193989 | 193998 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
24 | NC_018627 | CCCTA | 2 | 10 | 195285 | 195294 | 20 % | 20 % | 0 % | 60 % | Non-Coding |
25 | NC_018627 | GTTTT | 2 | 10 | 198636 | 198645 | 0 % | 80 % | 20 % | 0 % | Non-Coding |
26 | NC_018627 | ATTAA | 2 | 10 | 201060 | 201069 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
27 | NC_018627 | ATAAA | 2 | 10 | 225895 | 225904 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
28 | NC_018627 | ATTTT | 2 | 10 | 226752 | 226761 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
29 | NC_018627 | TTTAA | 2 | 10 | 255885 | 255894 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
30 | NC_018627 | AAGAT | 2 | 10 | 255959 | 255968 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
31 | NC_018627 | GAAGA | 2 | 10 | 267652 | 267661 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
32 | NC_018627 | TAAAA | 2 | 10 | 274667 | 274676 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
33 | NC_018627 | ATTTT | 2 | 10 | 289714 | 289723 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
34 | NC_018627 | AAAGG | 2 | 10 | 301434 | 301443 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
35 | NC_018627 | ATAGG | 2 | 10 | 307637 | 307646 | 40 % | 20 % | 40 % | 0 % | Non-Coding |
36 | NC_018627 | CCTAC | 2 | 10 | 321844 | 321853 | 20 % | 20 % | 0 % | 60 % | Non-Coding |
37 | NC_018627 | TGAAA | 2 | 10 | 330004 | 330013 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
38 | NC_018627 | ATTAT | 2 | 10 | 339517 | 339526 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
39 | NC_018627 | CTTTT | 2 | 10 | 340399 | 340408 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
40 | NC_018627 | TCTTG | 2 | 10 | 346320 | 346329 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
41 | NC_018627 | AATAA | 2 | 10 | 348213 | 348222 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
42 | NC_018627 | TGAAA | 2 | 10 | 349442 | 349451 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
43 | NC_018627 | GTATT | 2 | 10 | 360573 | 360582 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
44 | NC_018627 | GAATA | 2 | 10 | 368651 | 368660 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
45 | NC_018627 | CACTA | 2 | 10 | 387300 | 387309 | 40 % | 20 % | 0 % | 40 % | Non-Coding |
46 | NC_018627 | GTTTC | 2 | 10 | 388399 | 388408 | 0 % | 60 % | 20 % | 20 % | Non-Coding |
47 | NC_018627 | TTTAA | 2 | 10 | 394545 | 394554 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
48 | NC_018627 | GTTTT | 2 | 10 | 419857 | 419866 | 0 % | 80 % | 20 % | 0 % | Non-Coding |
49 | NC_018627 | TTACT | 2 | 10 | 419876 | 419885 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
50 | NC_018627 | AAGAG | 2 | 10 | 424993 | 425002 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
51 | NC_018627 | ATTTT | 2 | 10 | 443822 | 443831 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
52 | NC_018627 | GCTTC | 2 | 10 | 452721 | 452730 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
53 | NC_018627 | ATAGA | 2 | 10 | 460717 | 460726 | 60 % | 20 % | 20 % | 0 % | Non-Coding |
54 | NC_018627 | ATGTA | 2 | 10 | 467605 | 467614 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
55 | NC_018627 | TAAAT | 2 | 10 | 474246 | 474255 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
56 | NC_018627 | AACTT | 2 | 10 | 474259 | 474268 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
57 | NC_018627 | TAAAT | 2 | 10 | 475532 | 475541 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
58 | NC_018627 | GCAAA | 2 | 10 | 478408 | 478417 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
59 | NC_018627 | AAATA | 2 | 10 | 480816 | 480825 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
60 | NC_018627 | TTTAC | 2 | 10 | 490808 | 490817 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
61 | NC_018627 | AAAAT | 2 | 10 | 490865 | 490874 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
62 | NC_018627 | AATCT | 2 | 10 | 501655 | 501664 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
63 | NC_018627 | TAGGG | 2 | 10 | 501780 | 501789 | 20 % | 20 % | 60 % | 0 % | Non-Coding |
64 | NC_018627 | TAAAA | 2 | 10 | 546152 | 546161 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
65 | NC_018627 | TTTCT | 2 | 10 | 556742 | 556751 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
66 | NC_018627 | AAATA | 3 | 15 | 556755 | 556769 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
67 | NC_018627 | TTATT | 2 | 10 | 568047 | 568056 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
68 | NC_018627 | ATTAA | 2 | 10 | 568085 | 568094 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
69 | NC_018627 | ATATA | 2 | 10 | 582509 | 582518 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
70 | NC_018627 | ACAAA | 2 | 10 | 583767 | 583776 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
71 | NC_018627 | CAATA | 2 | 10 | 589371 | 589380 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
72 | NC_018627 | AATTA | 2 | 10 | 590242 | 590251 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
73 | NC_018627 | ATTTT | 2 | 10 | 594179 | 594188 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
74 | NC_018627 | ATTTA | 2 | 10 | 594492 | 594501 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
75 | NC_018627 | ATTTT | 2 | 10 | 598361 | 598370 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
76 | NC_018627 | TATCC | 2 | 10 | 619815 | 619824 | 20 % | 40 % | 0 % | 40 % | Non-Coding |
77 | NC_018627 | CATTA | 2 | 10 | 627143 | 627152 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
78 | NC_018627 | AGGGG | 2 | 10 | 627642 | 627651 | 20 % | 0 % | 80 % | 0 % | Non-Coding |
79 | NC_018627 | TGTAT | 2 | 10 | 642161 | 642170 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
80 | NC_018627 | ATCAA | 2 | 10 | 651332 | 651341 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
81 | NC_018627 | TTTTA | 2 | 10 | 654321 | 654330 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
82 | NC_018627 | GTATT | 2 | 10 | 655070 | 655079 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
83 | NC_018627 | ATTCT | 2 | 10 | 658149 | 658158 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
84 | NC_018627 | TTCCG | 2 | 10 | 659715 | 659724 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
85 | NC_018627 | AAGAG | 2 | 10 | 660538 | 660547 | 60 % | 0 % | 40 % | 0 % | Non-Coding |
86 | NC_018627 | TCTTA | 2 | 10 | 661686 | 661695 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
87 | NC_018627 | AAATA | 2 | 10 | 661717 | 661726 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
88 | NC_018627 | CTAAG | 2 | 10 | 664692 | 664701 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
89 | NC_018627 | AAAAT | 2 | 10 | 666561 | 666570 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
90 | NC_018627 | TTAAT | 2 | 10 | 666578 | 666587 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
91 | NC_018627 | TAAAA | 2 | 10 | 672970 | 672979 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
92 | NC_018627 | TAAAA | 2 | 10 | 689282 | 689291 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
93 | NC_018627 | AAGCA | 2 | 10 | 702226 | 702235 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
94 | NC_018627 | CAGAG | 2 | 10 | 723575 | 723584 | 40 % | 0 % | 40 % | 20 % | Non-Coding |
95 | NC_018627 | GGCCT | 2 | 10 | 755499 | 755508 | 0 % | 20 % | 40 % | 40 % | Non-Coding |
96 | NC_018627 | AATCA | 2 | 10 | 757481 | 757490 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
97 | NC_018627 | GAAAA | 2 | 10 | 799126 | 799135 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
98 | NC_018627 | AGCTA | 2 | 10 | 802267 | 802276 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
99 | NC_018627 | TTTAC | 2 | 10 | 804190 | 804199 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
100 | NC_018627 | AAGAA | 2 | 10 | 806884 | 806893 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
101 | NC_018627 | TCTTT | 2 | 10 | 831910 | 831919 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
102 | NC_018627 | ATTTT | 2 | 10 | 841870 | 841879 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
103 | NC_018627 | AGAAC | 2 | 10 | 852342 | 852351 | 60 % | 0 % | 20 % | 20 % | Non-Coding |
104 | NC_018627 | TAAAA | 2 | 10 | 861777 | 861786 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
105 | NC_018627 | AAAAG | 2 | 10 | 863491 | 863500 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
106 | NC_018627 | TCAAA | 2 | 10 | 865057 | 865066 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
107 | NC_018627 | TTTCA | 2 | 10 | 867638 | 867647 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
108 | NC_018627 | TAAAA | 2 | 10 | 870497 | 870506 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
109 | NC_018627 | AAAAG | 2 | 10 | 878447 | 878456 | 80 % | 0 % | 20 % | 0 % | Non-Coding |
110 | NC_018627 | TTTTC | 2 | 10 | 881584 | 881593 | 0 % | 80 % | 0 % | 20 % | Non-Coding |
111 | NC_018627 | AAGTT | 2 | 10 | 891343 | 891352 | 40 % | 40 % | 20 % | 0 % | Non-Coding |
112 | NC_018627 | TCTAT | 2 | 10 | 917013 | 917022 | 20 % | 60 % | 0 % | 20 % | Non-Coding |
113 | NC_018627 | TTAAA | 2 | 10 | 930038 | 930047 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
114 | NC_018627 | CTAAT | 2 | 10 | 950790 | 950799 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
115 | NC_018627 | ACTAG | 2 | 10 | 950849 | 950858 | 40 % | 20 % | 20 % | 20 % | Non-Coding |
116 | NC_018627 | AATTA | 2 | 10 | 955545 | 955554 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
117 | NC_018627 | TTTTG | 2 | 10 | 957225 | 957234 | 0 % | 80 % | 20 % | 0 % | Non-Coding |
118 | NC_018627 | CCCTT | 2 | 10 | 968616 | 968625 | 0 % | 40 % | 0 % | 60 % | Non-Coding |
119 | NC_018627 | AATTT | 2 | 10 | 980624 | 980633 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
120 | NC_018627 | TATTG | 2 | 10 | 992286 | 992295 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
121 | NC_018627 | TAAAT | 2 | 10 | 1009645 | 1009654 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
122 | NC_018627 | AACCT | 2 | 10 | 1017528 | 1017537 | 40 % | 20 % | 0 % | 40 % | Non-Coding |
123 | NC_018627 | TAACT | 2 | 10 | 1018455 | 1018464 | 40 % | 40 % | 0 % | 20 % | Non-Coding |
124 | NC_018627 | ACATA | 2 | 10 | 1019194 | 1019203 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
125 | NC_018627 | CTTTC | 2 | 10 | 1020273 | 1020282 | 0 % | 60 % | 0 % | 40 % | Non-Coding |
126 | NC_018627 | CTTCT | 2 | 10 | 1021372 | 1021381 | 0 % | 60 % | 0 % | 40 % | Non-Coding |
127 | NC_018627 | TTAAA | 2 | 10 | 1028326 | 1028335 | 60 % | 40 % | 0 % | 0 % | Non-Coding |
128 | NC_018627 | AACAA | 2 | 10 | 1028539 | 1028548 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
129 | NC_018627 | TAAAA | 2 | 10 | 1053138 | 1053147 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
130 | NC_018627 | AGCCC | 2 | 10 | 1066760 | 1066769 | 20 % | 0 % | 20 % | 60 % | Non-Coding |
131 | NC_018627 | TTAAT | 2 | 10 | 1069698 | 1069707 | 40 % | 60 % | 0 % | 0 % | Non-Coding |
132 | NC_018627 | AAAAG | 2 | 10 | 1151040 | 1151049 | 80 % | 0 % | 20 % | 0 % | Non-Coding |