MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Cardinium endosymbiont cEper1 of Encarsia pergandiella

Total Repeats: 42

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_018605	AAGAAA	2	12	20280	20291	83.33 %	0 %	16.67 %	0 %	Non-Coding
2	NC_018605	AAAATA	2	12	32967	32978	83.33 %	16.67 %	0 %	0 %	Non-Coding
3	NC_018605	ATATAG	2	12	81953	81964	50 %	33.33 %	16.67 %	0 %	Non-Coding
4	NC_018605	ATTTTA	2	12	105162	105173	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_018605	TTGATC	2	12	129612	129623	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
6	NC_018605	AATTTA	2	12	149323	149334	50 %	50 %	0 %	0 %	Non-Coding
7	NC_018605	TTTAAG	2	12	215987	215998	33.33 %	50 %	16.67 %	0 %	Non-Coding
8	NC_018605	TAAAAT	2	12	241813	241824	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_018605	TCGCTT	2	12	271018	271029	0 %	50 %	16.67 %	33.33 %	Non-Coding
10	NC_018605	CTTAAA	2	12	272025	272036	50 %	33.33 %	0 %	16.67 %	Non-Coding
11	NC_018605	ATTTAT	2	12	285919	285930	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_018605	TAAAGG	2	12	305513	305524	50 %	16.67 %	33.33 %	0 %	Non-Coding
13	NC_018605	GATATA	2	12	312846	312857	50 %	33.33 %	16.67 %	0 %	Non-Coding
14	NC_018605	TTGTAT	2	12	371414	371425	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
15	NC_018605	TTTAAT	2	12	447268	447279	33.33 %	66.67 %	0 %	0 %	Non-Coding
16	NC_018605	TTTTAC	2	12	457926	457937	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
17	NC_018605	CTATGG	2	12	458069	458080	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
18	NC_018605	CTTTAT	2	12	466814	466825	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
19	NC_018605	ATTTTT	2	12	501633	501644	16.67 %	83.33 %	0 %	0 %	Non-Coding
20	NC_018605	GAGCAA	2	12	517918	517929	50 %	0 %	33.33 %	16.67 %	Non-Coding
21	NC_018605	ACCTAA	2	12	541650	541661	50 %	16.67 %	0 %	33.33 %	Non-Coding
22	NC_018605	ATAGTA	2	12	565813	565824	50 %	33.33 %	16.67 %	0 %	Non-Coding
23	NC_018605	TAGAAC	2	12	572375	572386	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
24	NC_018605	TTATAT	2	12	573805	573816	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_018605	AAGAAA	2	12	612085	612096	83.33 %	0 %	16.67 %	0 %	Non-Coding
26	NC_018605	TTTTCT	2	12	615818	615829	0 %	83.33 %	0 %	16.67 %	Non-Coding
27	NC_018605	GACATA	2	12	628433	628444	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
28	NC_018605	ACCTTA	2	12	698283	698294	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
29	NC_018605	TTTAGT	2	12	702260	702271	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
30	NC_018605	AAAAAT	2	12	706531	706542	83.33 %	16.67 %	0 %	0 %	Non-Coding
31	NC_018605	CTGTAT	2	12	706719	706730	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
32	NC_018605	TATTTT	2	12	736452	736463	16.67 %	83.33 %	0 %	0 %	Non-Coding
33	NC_018605	ATTTTT	2	12	747526	747537	16.67 %	83.33 %	0 %	0 %	Non-Coding
34	NC_018605	ATTATA	2	12	759129	759140	50 %	50 %	0 %	0 %	Non-Coding
35	NC_018605	ATTACT	2	12	767757	767768	33.33 %	50 %	0 %	16.67 %	Non-Coding
36	NC_018605	TTCTGT	2	12	814204	814215	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
37	NC_018605	CAAAAT	2	12	816983	816994	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
38	NC_018605	TATTGC	2	12	842730	842741	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
39	NC_018605	AACCAT	2	12	846530	846541	50 %	16.67 %	0 %	33.33 %	Non-Coding
40	NC_018605	ATTATA	2	12	865840	865851	50 %	50 %	0 %	0 %	Non-Coding
41	NC_018605	ATTATA	2	12	869201	869212	50 %	50 %	0 %	0 %	Non-Coding
42	NC_018605	AAGAAA	2	12	886741	886752	83.33 %	0 %	16.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.