Tri-nucleotide Repeats of Sinorhizobium fredii USDA 257 plasmid pUSDA257
Total Repeats: 122
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_018194 | GAA | 2 | 6 | 325 | 330 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
2 | NC_018194 | GCC | 2 | 6 | 421 | 426 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
3 | NC_018194 | GAT | 2 | 6 | 434 | 439 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
4 | NC_018194 | GAA | 2 | 6 | 476 | 481 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
5 | NC_018194 | GCC | 2 | 6 | 618 | 623 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
6 | NC_018194 | GCA | 2 | 6 | 700 | 705 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
7 | NC_018194 | CTC | 2 | 6 | 825 | 830 | 0 % | 33.33 % | 0 % | 66.67 % | Non-Coding |
8 | NC_018194 | AGT | 2 | 6 | 944 | 949 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
9 | NC_018194 | CCA | 2 | 6 | 1261 | 1266 | 33.33 % | 0 % | 0 % | 66.67 % | 398356371 |
10 | NC_018194 | GCC | 2 | 6 | 1379 | 1384 | 0 % | 0 % | 33.33 % | 66.67 % | 398356371 |
11 | NC_018194 | AGC | 2 | 6 | 1679 | 1684 | 33.33 % | 0 % | 33.33 % | 33.33 % | 398356371 |
12 | NC_018194 | CAT | 2 | 6 | 1759 | 1764 | 33.33 % | 33.33 % | 0 % | 33.33 % | 398356371 |
13 | NC_018194 | CTT | 2 | 6 | 1903 | 1908 | 0 % | 66.67 % | 0 % | 33.33 % | 398356371 |
14 | NC_018194 | GCC | 2 | 6 | 2025 | 2030 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
15 | NC_018194 | CCA | 2 | 6 | 2054 | 2059 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
16 | NC_018194 | AAC | 2 | 6 | 2305 | 2310 | 66.67 % | 0 % | 0 % | 33.33 % | 398356372 |
17 | NC_018194 | GGC | 2 | 6 | 2422 | 2427 | 0 % | 0 % | 66.67 % | 33.33 % | 398356372 |
18 | NC_018194 | TCC | 2 | 6 | 2452 | 2457 | 0 % | 33.33 % | 0 % | 66.67 % | 398356372 |
19 | NC_018194 | CTT | 2 | 6 | 2472 | 2477 | 0 % | 66.67 % | 0 % | 33.33 % | 398356372 |
20 | NC_018194 | GGT | 2 | 6 | 2514 | 2519 | 0 % | 33.33 % | 66.67 % | 0 % | 398356372 |
21 | NC_018194 | ATT | 2 | 6 | 2568 | 2573 | 33.33 % | 66.67 % | 0 % | 0 % | 398356372 |
22 | NC_018194 | TGA | 2 | 6 | 2627 | 2632 | 33.33 % | 33.33 % | 33.33 % | 0 % | 398356372 |
23 | NC_018194 | TCC | 3 | 9 | 2803 | 2811 | 0 % | 33.33 % | 0 % | 66.67 % | 398356372 |
24 | NC_018194 | CTT | 2 | 6 | 2847 | 2852 | 0 % | 66.67 % | 0 % | 33.33 % | 398356372 |
25 | NC_018194 | GCT | 2 | 6 | 2989 | 2994 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356372 |
26 | NC_018194 | CTG | 2 | 6 | 2995 | 3000 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356372 |
27 | NC_018194 | CAT | 2 | 6 | 3005 | 3010 | 33.33 % | 33.33 % | 0 % | 33.33 % | 398356372 |
28 | NC_018194 | GCC | 2 | 6 | 3033 | 3038 | 0 % | 0 % | 33.33 % | 66.67 % | 398356372 |
29 | NC_018194 | CCT | 2 | 6 | 3098 | 3103 | 0 % | 33.33 % | 0 % | 66.67 % | 398356372 |
30 | NC_018194 | CAT | 2 | 6 | 3144 | 3149 | 33.33 % | 33.33 % | 0 % | 33.33 % | 398356372 |
31 | NC_018194 | CTC | 2 | 6 | 3260 | 3265 | 0 % | 33.33 % | 0 % | 66.67 % | 398356372 |
32 | NC_018194 | CTT | 2 | 6 | 3341 | 3346 | 0 % | 66.67 % | 0 % | 33.33 % | 398356372 |
33 | NC_018194 | TGC | 2 | 6 | 3370 | 3375 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356372 |
34 | NC_018194 | TGC | 2 | 6 | 3410 | 3415 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356372 |
35 | NC_018194 | AGC | 2 | 6 | 3418 | 3423 | 33.33 % | 0 % | 33.33 % | 33.33 % | 398356372 |
36 | NC_018194 | TCA | 2 | 6 | 3547 | 3552 | 33.33 % | 33.33 % | 0 % | 33.33 % | 398356372 |
37 | NC_018194 | ACA | 3 | 9 | 3824 | 3832 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
38 | NC_018194 | ATA | 2 | 6 | 3915 | 3920 | 66.67 % | 33.33 % | 0 % | 0 % | 398356373 |
39 | NC_018194 | TTG | 2 | 6 | 3993 | 3998 | 0 % | 66.67 % | 33.33 % | 0 % | 398356373 |
40 | NC_018194 | CTC | 2 | 6 | 4022 | 4027 | 0 % | 33.33 % | 0 % | 66.67 % | 398356373 |
41 | NC_018194 | CAG | 2 | 6 | 4033 | 4038 | 33.33 % | 0 % | 33.33 % | 33.33 % | 398356373 |
42 | NC_018194 | CGT | 2 | 6 | 4075 | 4080 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356373 |
43 | NC_018194 | CGC | 2 | 6 | 4269 | 4274 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
44 | NC_018194 | GAA | 2 | 6 | 4276 | 4281 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
45 | NC_018194 | AAG | 2 | 6 | 4293 | 4298 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
46 | NC_018194 | GCA | 2 | 6 | 4405 | 4410 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
47 | NC_018194 | ATC | 2 | 6 | 4546 | 4551 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
48 | NC_018194 | CAT | 2 | 6 | 4647 | 4652 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
49 | NC_018194 | TTG | 2 | 6 | 4817 | 4822 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
50 | NC_018194 | GCC | 2 | 6 | 4834 | 4839 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
51 | NC_018194 | CCA | 2 | 6 | 4874 | 4879 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
52 | NC_018194 | TTC | 2 | 6 | 4960 | 4965 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
53 | NC_018194 | CCG | 2 | 6 | 5024 | 5029 | 0 % | 0 % | 33.33 % | 66.67 % | Non-Coding |
54 | NC_018194 | GCC | 2 | 6 | 5250 | 5255 | 0 % | 0 % | 33.33 % | 66.67 % | 398356374 |
55 | NC_018194 | TCG | 2 | 6 | 5287 | 5292 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356374 |
56 | NC_018194 | GGC | 2 | 6 | 5306 | 5311 | 0 % | 0 % | 66.67 % | 33.33 % | 398356374 |
57 | NC_018194 | CAA | 2 | 6 | 5415 | 5420 | 66.67 % | 0 % | 0 % | 33.33 % | 398356374 |
58 | NC_018194 | CCG | 2 | 6 | 5545 | 5550 | 0 % | 0 % | 33.33 % | 66.67 % | 398356374 |
59 | NC_018194 | GTG | 2 | 6 | 5606 | 5611 | 0 % | 33.33 % | 66.67 % | 0 % | 398356374 |
60 | NC_018194 | ACC | 2 | 6 | 5716 | 5721 | 33.33 % | 0 % | 0 % | 66.67 % | 398356374 |
61 | NC_018194 | TCA | 2 | 6 | 5788 | 5793 | 33.33 % | 33.33 % | 0 % | 33.33 % | 398356374 |
62 | NC_018194 | GCC | 2 | 6 | 6032 | 6037 | 0 % | 0 % | 33.33 % | 66.67 % | 398356375 |
63 | NC_018194 | CAG | 2 | 6 | 6155 | 6160 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
64 | NC_018194 | GAG | 2 | 6 | 6361 | 6366 | 33.33 % | 0 % | 66.67 % | 0 % | 398356376 |
65 | NC_018194 | CGC | 2 | 6 | 6412 | 6417 | 0 % | 0 % | 33.33 % | 66.67 % | 398356376 |
66 | NC_018194 | CGC | 2 | 6 | 6420 | 6425 | 0 % | 0 % | 33.33 % | 66.67 % | 398356376 |
67 | NC_018194 | ATC | 2 | 6 | 6449 | 6454 | 33.33 % | 33.33 % | 0 % | 33.33 % | 398356376 |
68 | NC_018194 | TCG | 2 | 6 | 6459 | 6464 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356376 |
69 | NC_018194 | AGC | 2 | 6 | 6527 | 6532 | 33.33 % | 0 % | 33.33 % | 33.33 % | 398356376 |
70 | NC_018194 | TGC | 2 | 6 | 6621 | 6626 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356376 |
71 | NC_018194 | GTT | 2 | 6 | 6639 | 6644 | 0 % | 66.67 % | 33.33 % | 0 % | 398356376 |
72 | NC_018194 | CGC | 2 | 6 | 6682 | 6687 | 0 % | 0 % | 33.33 % | 66.67 % | 398356376 |
73 | NC_018194 | AGC | 2 | 6 | 6806 | 6811 | 33.33 % | 0 % | 33.33 % | 33.33 % | 398356376 |
74 | NC_018194 | CCG | 2 | 6 | 6826 | 6831 | 0 % | 0 % | 33.33 % | 66.67 % | 398356376 |
75 | NC_018194 | GCA | 2 | 6 | 6850 | 6855 | 33.33 % | 0 % | 33.33 % | 33.33 % | 398356376 |
76 | NC_018194 | TGC | 2 | 6 | 6883 | 6888 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356376 |
77 | NC_018194 | CGC | 2 | 6 | 6979 | 6984 | 0 % | 0 % | 33.33 % | 66.67 % | 398356376 |
78 | NC_018194 | GAT | 2 | 6 | 7079 | 7084 | 33.33 % | 33.33 % | 33.33 % | 0 % | 398356376 |
79 | NC_018194 | ATG | 2 | 6 | 7184 | 7189 | 33.33 % | 33.33 % | 33.33 % | 0 % | 398356376 |
80 | NC_018194 | CGT | 2 | 6 | 7209 | 7214 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356376 |
81 | NC_018194 | CGG | 2 | 6 | 7327 | 7332 | 0 % | 0 % | 66.67 % | 33.33 % | 398356376 |
82 | NC_018194 | TTG | 2 | 6 | 7374 | 7379 | 0 % | 66.67 % | 33.33 % | 0 % | 398356376 |
83 | NC_018194 | TGC | 2 | 6 | 7423 | 7428 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356376 |
84 | NC_018194 | CGC | 2 | 6 | 7557 | 7562 | 0 % | 0 % | 33.33 % | 66.67 % | 398356377 |
85 | NC_018194 | TCG | 2 | 6 | 7603 | 7608 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356377 |
86 | NC_018194 | CGA | 2 | 6 | 7670 | 7675 | 33.33 % | 0 % | 33.33 % | 33.33 % | 398356377 |
87 | NC_018194 | GCC | 2 | 6 | 7729 | 7734 | 0 % | 0 % | 33.33 % | 66.67 % | 398356377 |
88 | NC_018194 | TGT | 2 | 6 | 7752 | 7757 | 0 % | 66.67 % | 33.33 % | 0 % | 398356377 |
89 | NC_018194 | GAA | 2 | 6 | 7986 | 7991 | 66.67 % | 0 % | 33.33 % | 0 % | 398356377 |
90 | NC_018194 | CGT | 2 | 6 | 8057 | 8062 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356377 |
91 | NC_018194 | GGC | 2 | 6 | 8235 | 8240 | 0 % | 0 % | 66.67 % | 33.33 % | 398356378 |
92 | NC_018194 | GCT | 2 | 6 | 8377 | 8382 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356378 |
93 | NC_018194 | GCA | 2 | 6 | 8383 | 8388 | 33.33 % | 0 % | 33.33 % | 33.33 % | 398356378 |
94 | NC_018194 | CCA | 2 | 6 | 8467 | 8472 | 33.33 % | 0 % | 0 % | 66.67 % | 398356378 |
95 | NC_018194 | GCG | 2 | 6 | 8501 | 8506 | 0 % | 0 % | 66.67 % | 33.33 % | 398356378 |
96 | NC_018194 | AGC | 2 | 6 | 8522 | 8527 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
97 | NC_018194 | CGT | 2 | 6 | 8539 | 8544 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
98 | NC_018194 | GAA | 2 | 6 | 8642 | 8647 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
99 | NC_018194 | TGC | 2 | 6 | 8743 | 8748 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
100 | NC_018194 | GTC | 2 | 6 | 8806 | 8811 | 0 % | 33.33 % | 33.33 % | 33.33 % | Non-Coding |
101 | NC_018194 | TTC | 2 | 6 | 8920 | 8925 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
102 | NC_018194 | TCT | 2 | 6 | 8937 | 8942 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
103 | NC_018194 | TGA | 2 | 6 | 9038 | 9043 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
104 | NC_018194 | CGG | 2 | 6 | 9059 | 9064 | 0 % | 0 % | 66.67 % | 33.33 % | Non-Coding |
105 | NC_018194 | GCC | 2 | 6 | 9152 | 9157 | 0 % | 0 % | 33.33 % | 66.67 % | 398356379 |
106 | NC_018194 | AAG | 2 | 6 | 9165 | 9170 | 66.67 % | 0 % | 33.33 % | 0 % | 398356379 |
107 | NC_018194 | TCG | 2 | 6 | 9266 | 9271 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356379 |
108 | NC_018194 | ATG | 2 | 6 | 9275 | 9280 | 33.33 % | 33.33 % | 33.33 % | 0 % | 398356379 |
109 | NC_018194 | GTC | 2 | 6 | 9464 | 9469 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356379 |
110 | NC_018194 | AGA | 2 | 6 | 9644 | 9649 | 66.67 % | 0 % | 33.33 % | 0 % | 398356379 |
111 | NC_018194 | TCT | 2 | 6 | 9668 | 9673 | 0 % | 66.67 % | 0 % | 33.33 % | 398356379 |
112 | NC_018194 | TGA | 2 | 6 | 9678 | 9683 | 33.33 % | 33.33 % | 33.33 % | 0 % | 398356379 |
113 | NC_018194 | CCG | 2 | 6 | 9698 | 9703 | 0 % | 0 % | 33.33 % | 66.67 % | 398356379 |
114 | NC_018194 | GCG | 2 | 6 | 9732 | 9737 | 0 % | 0 % | 66.67 % | 33.33 % | 398356379 |
115 | NC_018194 | GCT | 2 | 6 | 9743 | 9748 | 0 % | 33.33 % | 33.33 % | 33.33 % | 398356379 |
116 | NC_018194 | CGA | 2 | 6 | 9802 | 9807 | 33.33 % | 0 % | 33.33 % | 33.33 % | 398356379 |
117 | NC_018194 | GAT | 2 | 6 | 9961 | 9966 | 33.33 % | 33.33 % | 33.33 % | 0 % | 398356380 |
118 | NC_018194 | CGG | 2 | 6 | 9978 | 9983 | 0 % | 0 % | 66.67 % | 33.33 % | 398356380 |
119 | NC_018194 | GTT | 2 | 6 | 10002 | 10007 | 0 % | 66.67 % | 33.33 % | 0 % | 398356380 |
120 | NC_018194 | GGC | 2 | 6 | 10036 | 10041 | 0 % | 0 % | 66.67 % | 33.33 % | 398356380 |
121 | NC_018194 | CGC | 2 | 6 | 10068 | 10073 | 0 % | 0 % | 33.33 % | 66.67 % | 398356380 |
122 | NC_018194 | GAA | 2 | 6 | 10102 | 10107 | 66.67 % | 0 % | 33.33 % | 0 % | 398356380 |