Penta-nucleotide Coding Repeats of Sinorhizobium fredii USDA 257 plasmid pUSDA257
Total Repeats: 91
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_018179 | TCGGC | 2 | 10 | 265 | 274 | 0 % | 20 % | 40 % | 40 % | 400752654 |
2 | NC_018179 | GGCGC | 2 | 10 | 1925 | 1934 | 0 % | 0 % | 60 % | 40 % | 400752656 |
3 | NC_018179 | ATCGT | 2 | 10 | 2020 | 2029 | 20 % | 40 % | 20 % | 20 % | 400752656 |
4 | NC_018179 | CGATG | 2 | 10 | 3433 | 3442 | 20 % | 20 % | 40 % | 20 % | 400752658 |
5 | NC_018179 | AGCGC | 2 | 10 | 4923 | 4932 | 20 % | 0 % | 40 % | 40 % | 400752660 |
6 | NC_018179 | CACCT | 2 | 10 | 5750 | 5759 | 20 % | 20 % | 0 % | 60 % | 400752660 |
7 | NC_018179 | CGAGG | 2 | 10 | 7190 | 7199 | 20 % | 0 % | 60 % | 20 % | 400752663 |
8 | NC_018179 | CCTGG | 2 | 10 | 7937 | 7946 | 0 % | 20 % | 40 % | 40 % | 400752664 |
9 | NC_018179 | CACGA | 2 | 10 | 9093 | 9102 | 40 % | 0 % | 20 % | 40 % | 400752666 |
10 | NC_018179 | TTTTC | 2 | 10 | 10420 | 10429 | 0 % | 80 % | 0 % | 20 % | 400752671 |
11 | NC_018179 | AGCGC | 2 | 10 | 11158 | 11167 | 20 % | 0 % | 40 % | 40 % | 400752671 |
12 | NC_018179 | CCGAC | 2 | 10 | 12879 | 12888 | 20 % | 0 % | 20 % | 60 % | 400752673 |
13 | NC_018179 | ACGGC | 2 | 10 | 17668 | 17677 | 20 % | 0 % | 40 % | 40 % | 400752676 |
14 | NC_018179 | TGACC | 2 | 10 | 18014 | 18023 | 20 % | 20 % | 20 % | 40 % | 400752676 |
15 | NC_018179 | AGGGG | 2 | 10 | 20180 | 20189 | 20 % | 0 % | 80 % | 0 % | 400752680 |
16 | NC_018179 | CATGA | 2 | 10 | 24024 | 24033 | 40 % | 20 % | 20 % | 20 % | 400752685 |
17 | NC_018179 | CCGCA | 2 | 10 | 25483 | 25492 | 20 % | 0 % | 20 % | 60 % | 400752686 |
18 | NC_018179 | TAGGC | 2 | 10 | 26600 | 26609 | 20 % | 20 % | 40 % | 20 % | 400752688 |
19 | NC_018179 | CGCTT | 2 | 10 | 27373 | 27382 | 0 % | 40 % | 20 % | 40 % | 400752688 |
20 | NC_018179 | CGATC | 2 | 10 | 29529 | 29538 | 20 % | 20 % | 20 % | 40 % | 400752691 |
21 | NC_018179 | TCCTG | 2 | 10 | 30743 | 30752 | 0 % | 40 % | 20 % | 40 % | 400752692 |
22 | NC_018179 | CAGGC | 2 | 10 | 31124 | 31133 | 20 % | 0 % | 40 % | 40 % | 400752692 |
23 | NC_018179 | TTGGA | 2 | 10 | 32076 | 32085 | 20 % | 40 % | 40 % | 0 % | 400752694 |
24 | NC_018179 | CGCTG | 2 | 10 | 32638 | 32647 | 0 % | 20 % | 40 % | 40 % | 400752694 |
25 | NC_018179 | CCTCG | 2 | 10 | 33673 | 33682 | 0 % | 20 % | 20 % | 60 % | 400752695 |
26 | NC_018179 | TCGGC | 2 | 10 | 33862 | 33871 | 0 % | 20 % | 40 % | 40 % | 400752695 |
27 | NC_018179 | TCGCG | 2 | 10 | 35104 | 35113 | 0 % | 20 % | 40 % | 40 % | 400752696 |
28 | NC_018179 | AAGGC | 2 | 10 | 35616 | 35625 | 40 % | 0 % | 40 % | 20 % | 400752696 |
29 | NC_018179 | AATGC | 2 | 10 | 36601 | 36610 | 40 % | 20 % | 20 % | 20 % | 400752697 |
30 | NC_018179 | CTGAG | 2 | 10 | 38341 | 38350 | 20 % | 20 % | 40 % | 20 % | 400752698 |
31 | NC_018179 | CCAGA | 2 | 10 | 41376 | 41385 | 40 % | 0 % | 20 % | 40 % | 400752701 |
32 | NC_018179 | TCGCA | 2 | 10 | 41955 | 41964 | 20 % | 20 % | 20 % | 40 % | 400752703 |
33 | NC_018179 | GGATG | 2 | 10 | 43233 | 43242 | 20 % | 20 % | 60 % | 0 % | 400752704 |
34 | NC_018179 | ATTTC | 2 | 10 | 44183 | 44192 | 20 % | 60 % | 0 % | 20 % | 400752705 |
35 | NC_018179 | GCTCA | 2 | 10 | 44195 | 44204 | 20 % | 20 % | 20 % | 40 % | 400752705 |
36 | NC_018179 | TGAAC | 2 | 10 | 44511 | 44520 | 40 % | 20 % | 20 % | 20 % | 400752705 |
37 | NC_018179 | ATAGT | 2 | 10 | 45284 | 45293 | 40 % | 40 % | 20 % | 0 % | 400752706 |
38 | NC_018179 | ACGTT | 2 | 10 | 45903 | 45912 | 20 % | 40 % | 20 % | 20 % | 400752707 |
39 | NC_018179 | CCAAT | 2 | 10 | 48115 | 48124 | 40 % | 20 % | 0 % | 40 % | 400752710 |
40 | NC_018179 | CGATC | 2 | 10 | 48677 | 48686 | 20 % | 20 % | 20 % | 40 % | 400752710 |
41 | NC_018179 | TCCTC | 2 | 10 | 50995 | 51004 | 0 % | 40 % | 0 % | 60 % | 400752713 |
42 | NC_018179 | TTCAA | 2 | 10 | 56461 | 56470 | 40 % | 40 % | 0 % | 20 % | 400752722 |
43 | NC_018179 | TGCGC | 2 | 10 | 59292 | 59301 | 0 % | 20 % | 40 % | 40 % | 400752723 |
44 | NC_018179 | ATCAG | 2 | 10 | 65480 | 65489 | 40 % | 20 % | 20 % | 20 % | 400752732 |
45 | NC_018179 | AAAGC | 2 | 10 | 67391 | 67400 | 60 % | 0 % | 20 % | 20 % | 400752736 |
46 | NC_018179 | ACCGA | 2 | 10 | 68447 | 68456 | 40 % | 0 % | 20 % | 40 % | 400752737 |
47 | NC_018179 | AGTCG | 2 | 10 | 69940 | 69949 | 20 % | 20 % | 40 % | 20 % | 400752739 |
48 | NC_018179 | TATTG | 2 | 10 | 70471 | 70480 | 20 % | 60 % | 20 % | 0 % | 400752739 |
49 | NC_018179 | GGATC | 2 | 10 | 72026 | 72035 | 20 % | 20 % | 40 % | 20 % | 400752740 |
50 | NC_018179 | GACGC | 2 | 10 | 72555 | 72564 | 20 % | 0 % | 40 % | 40 % | 400752740 |
51 | NC_018179 | TTCCG | 2 | 10 | 72681 | 72690 | 0 % | 40 % | 20 % | 40 % | 400752740 |
52 | NC_018179 | CATCA | 2 | 10 | 72909 | 72918 | 40 % | 20 % | 0 % | 40 % | 400752740 |
53 | NC_018179 | CCCAG | 2 | 10 | 73227 | 73236 | 20 % | 0 % | 20 % | 60 % | 400752741 |
54 | NC_018179 | GCGTG | 2 | 10 | 74469 | 74478 | 0 % | 20 % | 60 % | 20 % | 400752742 |
55 | NC_018179 | GAAGA | 2 | 10 | 79748 | 79757 | 60 % | 0 % | 40 % | 0 % | 400752748 |
56 | NC_018179 | GAAAT | 2 | 10 | 82844 | 82853 | 60 % | 20 % | 20 % | 0 % | 400752751 |
57 | NC_018179 | CCGTC | 2 | 10 | 83297 | 83306 | 0 % | 20 % | 20 % | 60 % | 400752753 |
58 | NC_018179 | CGAAA | 2 | 10 | 85804 | 85813 | 60 % | 0 % | 20 % | 20 % | 400752757 |
59 | NC_018179 | GATCA | 2 | 10 | 87694 | 87703 | 40 % | 20 % | 20 % | 20 % | 400752760 |
60 | NC_018179 | CGCGA | 2 | 10 | 90623 | 90632 | 20 % | 0 % | 40 % | 40 % | 400752765 |
61 | NC_018179 | TCGTC | 2 | 10 | 91044 | 91053 | 0 % | 40 % | 20 % | 40 % | 400752765 |
62 | NC_018179 | GCCGC | 2 | 10 | 91512 | 91521 | 0 % | 0 % | 40 % | 60 % | 400752765 |
63 | NC_018179 | GGCCA | 2 | 10 | 92354 | 92363 | 20 % | 0 % | 40 % | 40 % | 400752766 |
64 | NC_018179 | CCGGA | 2 | 10 | 96091 | 96100 | 20 % | 0 % | 40 % | 40 % | 400752769 |
65 | NC_018179 | GCAGC | 2 | 10 | 97185 | 97194 | 20 % | 0 % | 40 % | 40 % | 400752770 |
66 | NC_018179 | GCATC | 2 | 10 | 98937 | 98946 | 20 % | 20 % | 20 % | 40 % | 400752774 |
67 | NC_018179 | CGGAA | 2 | 10 | 101827 | 101836 | 40 % | 0 % | 40 % | 20 % | 400752778 |
68 | NC_018179 | TGCGC | 2 | 10 | 102256 | 102265 | 0 % | 20 % | 40 % | 40 % | 400752778 |
69 | NC_018179 | CGTTC | 2 | 10 | 104274 | 104283 | 0 % | 40 % | 20 % | 40 % | 400752780 |
70 | NC_018179 | CTCGG | 2 | 10 | 107470 | 107479 | 0 % | 20 % | 40 % | 40 % | 400752784 |
71 | NC_018179 | ACGCG | 2 | 10 | 107736 | 107745 | 20 % | 0 % | 40 % | 40 % | 400752784 |
72 | NC_018179 | TCGCC | 2 | 10 | 108857 | 108866 | 0 % | 20 % | 20 % | 60 % | 400752785 |
73 | NC_018179 | GACCT | 2 | 10 | 112747 | 112756 | 20 % | 20 % | 20 % | 40 % | 400752791 |
74 | NC_018179 | TGCAC | 2 | 10 | 114810 | 114819 | 20 % | 20 % | 20 % | 40 % | 400752793 |
75 | NC_018179 | ACCGT | 2 | 10 | 114890 | 114899 | 20 % | 20 % | 20 % | 40 % | 400752793 |
76 | NC_018179 | CGGAC | 2 | 10 | 116827 | 116836 | 20 % | 0 % | 40 % | 40 % | 400752794 |
77 | NC_018179 | CCCTT | 2 | 10 | 124980 | 124989 | 0 % | 40 % | 0 % | 60 % | 400752800 |
78 | NC_018179 | TTGCC | 2 | 10 | 132054 | 132063 | 0 % | 40 % | 20 % | 40 % | 400752806 |
79 | NC_018179 | TTTCC | 2 | 10 | 133064 | 133073 | 0 % | 60 % | 0 % | 40 % | 400752807 |
80 | NC_018179 | GGCGA | 2 | 10 | 134494 | 134503 | 20 % | 0 % | 60 % | 20 % | 400752808 |
81 | NC_018179 | GTGTC | 2 | 10 | 137473 | 137482 | 0 % | 40 % | 40 % | 20 % | 400752811 |
82 | NC_018179 | GCGCG | 2 | 10 | 137954 | 137963 | 0 % | 0 % | 60 % | 40 % | 400752811 |
83 | NC_018179 | TGGCC | 2 | 10 | 138017 | 138026 | 0 % | 20 % | 40 % | 40 % | 400752811 |
84 | NC_018179 | GTGCC | 2 | 10 | 138113 | 138122 | 0 % | 20 % | 40 % | 40 % | 400752811 |
85 | NC_018179 | GATTG | 2 | 10 | 139182 | 139191 | 20 % | 40 % | 40 % | 0 % | 400752813 |
86 | NC_018179 | CCGCA | 2 | 10 | 140067 | 140076 | 20 % | 0 % | 20 % | 60 % | 400752816 |
87 | NC_018179 | CAATT | 2 | 10 | 140087 | 140096 | 40 % | 40 % | 0 % | 20 % | 400752816 |
88 | NC_018179 | GCCTT | 2 | 10 | 144263 | 144272 | 0 % | 40 % | 20 % | 40 % | 400752823 |
89 | NC_018179 | TCGAT | 2 | 10 | 146801 | 146810 | 20 % | 40 % | 20 % | 20 % | 400752827 |
90 | NC_018179 | AGCCC | 2 | 10 | 153872 | 153881 | 20 % | 0 % | 20 % | 60 % | 400752834 |
91 | NC_018179 | GAAGA | 2 | 10 | 154337 | 154346 | 60 % | 0 % | 40 % | 0 % | 400752835 |