MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Lactococcus lactis subsp. cremoris NZ9000 chromosome

Total Repeats: 144

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017949	TAATAT	2	12	52991	53002	50 %	50 %	0 %	0 %	Non-Coding
2	NC_017949	TGAAAA	2	12	54347	54358	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
3	NC_017949	TAAAAT	2	12	62061	62072	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_017949	TAAAAA	2	12	92734	92745	83.33 %	16.67 %	0 %	0 %	Non-Coding
5	NC_017949	TAAAAA	2	12	150516	150527	83.33 %	16.67 %	0 %	0 %	Non-Coding
6	NC_017949	TTATTT	2	12	173441	173452	16.67 %	83.33 %	0 %	0 %	Non-Coding
7	NC_017949	TATAAA	2	12	177675	177686	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_017949	AAAACA	2	12	188183	188194	83.33 %	0 %	0 %	16.67 %	Non-Coding
9	NC_017949	TGATTT	2	12	191289	191300	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
10	NC_017949	TAAAAA	2	12	220399	220410	83.33 %	16.67 %	0 %	0 %	Non-Coding
11	NC_017949	TCAAAA	2	12	225319	225330	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
12	NC_017949	ATTCTA	2	12	262334	262345	33.33 %	50 %	0 %	16.67 %	Non-Coding
13	NC_017949	GAAAAT	2	12	275478	275489	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
14	NC_017949	TTTAAA	2	12	293008	293019	50 %	50 %	0 %	0 %	Non-Coding
15	NC_017949	AAGTTT	2	12	323541	323552	33.33 %	50 %	16.67 %	0 %	Non-Coding
16	NC_017949	TTGTTT	2	12	323980	323991	0 %	83.33 %	16.67 %	0 %	Non-Coding
17	NC_017949	ATTTTT	2	12	342056	342067	16.67 %	83.33 %	0 %	0 %	Non-Coding
18	NC_017949	ACTTTG	2	12	354369	354380	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
19	NC_017949	TAAAAT	2	12	386629	386640	66.67 %	33.33 %	0 %	0 %	Non-Coding
20	NC_017949	TAAAAA	2	12	404565	404576	83.33 %	16.67 %	0 %	0 %	Non-Coding
21	NC_017949	ATGAAA	2	12	429152	429163	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
22	NC_017949	TTTTTA	2	12	433988	433999	16.67 %	83.33 %	0 %	0 %	Non-Coding
23	NC_017949	TTTTAA	2	12	439633	439644	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_017949	ACACCG	2	12	439726	439737	33.33 %	0 %	16.67 %	50 %	Non-Coding
25	NC_017949	TGTTTT	2	12	461797	461808	0 %	83.33 %	16.67 %	0 %	Non-Coding
26	NC_017949	AAAATA	2	12	472982	472993	83.33 %	16.67 %	0 %	0 %	Non-Coding
27	NC_017949	TTATTT	2	12	473328	473339	16.67 %	83.33 %	0 %	0 %	Non-Coding
28	NC_017949	TGGAAG	2	12	516943	516954	33.33 %	16.67 %	50 %	0 %	Non-Coding
29	NC_017949	TATAAT	2	12	547736	547747	50 %	50 %	0 %	0 %	Non-Coding
30	NC_017949	AGCATA	2	12	562131	562142	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
31	NC_017949	GGTTAA	2	12	580386	580397	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
32	NC_017949	ATTTAT	2	12	586191	586202	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_017949	TGTTAA	2	12	596642	596653	33.33 %	50 %	16.67 %	0 %	Non-Coding
34	NC_017949	TAATTT	2	12	629021	629032	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_017949	AAGTTC	2	12	648936	648947	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
36	NC_017949	ATTTTT	2	12	670810	670821	16.67 %	83.33 %	0 %	0 %	Non-Coding
37	NC_017949	CTCAAA	2	12	677255	677266	50 %	16.67 %	0 %	33.33 %	Non-Coding
38	NC_017949	TTACTT	2	12	706845	706856	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
39	NC_017949	AAAATG	2	12	729280	729291	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
40	NC_017949	CAAATA	3	18	821241	821258	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
41	NC_017949	CTGACA	2	12	827383	827394	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
42	NC_017949	TAAAAA	2	12	853419	853430	83.33 %	16.67 %	0 %	0 %	Non-Coding
43	NC_017949	TAAAAA	2	12	870698	870709	83.33 %	16.67 %	0 %	0 %	Non-Coding
44	NC_017949	ATTTTT	2	12	874304	874315	16.67 %	83.33 %	0 %	0 %	Non-Coding
45	NC_017949	AGTAAT	2	12	890816	890827	50 %	33.33 %	16.67 %	0 %	Non-Coding
46	NC_017949	TACTTA	2	12	893783	893794	33.33 %	50 %	0 %	16.67 %	Non-Coding
47	NC_017949	ATTTTA	2	12	894319	894330	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_017949	AGAAAA	2	12	895477	895488	83.33 %	0 %	16.67 %	0 %	Non-Coding
49	NC_017949	ATATAA	2	12	897368	897379	66.67 %	33.33 %	0 %	0 %	Non-Coding
50	NC_017949	ATAAAT	2	12	904037	904048	66.67 %	33.33 %	0 %	0 %	Non-Coding
51	NC_017949	TATAAA	2	12	946042	946053	66.67 %	33.33 %	0 %	0 %	Non-Coding
52	NC_017949	TACTTT	2	12	961922	961933	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
53	NC_017949	TTTCTA	2	12	964056	964067	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
54	NC_017949	CTAGAA	2	12	985415	985426	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
55	NC_017949	TGACAA	2	12	985630	985641	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
56	NC_017949	ATAAAT	2	12	1024364	1024375	66.67 %	33.33 %	0 %	0 %	Non-Coding
57	NC_017949	TAAAAA	2	12	1025590	1025601	83.33 %	16.67 %	0 %	0 %	Non-Coding
58	NC_017949	AACTGC	2	12	1029934	1029945	33.33 %	16.67 %	16.67 %	33.33 %	Non-Coding
59	NC_017949	AAAAAG	2	12	1073121	1073132	83.33 %	0 %	16.67 %	0 %	Non-Coding
60	NC_017949	AAAGAA	2	12	1077455	1077466	83.33 %	0 %	16.67 %	0 %	Non-Coding
61	NC_017949	TATTTT	2	12	1090017	1090028	16.67 %	83.33 %	0 %	0 %	Non-Coding
62	NC_017949	AATAAA	2	12	1095633	1095644	83.33 %	16.67 %	0 %	0 %	Non-Coding
63	NC_017949	TTTATT	2	12	1112697	1112708	16.67 %	83.33 %	0 %	0 %	Non-Coding
64	NC_017949	AATATT	2	12	1116213	1116224	50 %	50 %	0 %	0 %	Non-Coding
65	NC_017949	ATATGA	2	12	1120152	1120163	50 %	33.33 %	16.67 %	0 %	Non-Coding
66	NC_017949	AGTTGA	2	12	1181428	1181439	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
67	NC_017949	CTTTTC	2	12	1182660	1182671	0 %	66.67 %	0 %	33.33 %	Non-Coding
68	NC_017949	AAAAGG	2	12	1183855	1183866	66.67 %	0 %	33.33 %	0 %	Non-Coding
69	NC_017949	TATGAT	2	12	1184503	1184514	33.33 %	50 %	16.67 %	0 %	Non-Coding
70	NC_017949	GAATAA	2	12	1207875	1207886	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
71	NC_017949	TTAGAA	2	12	1208150	1208161	50 %	33.33 %	16.67 %	0 %	Non-Coding
72	NC_017949	AATAAA	2	12	1227025	1227036	83.33 %	16.67 %	0 %	0 %	Non-Coding
73	NC_017949	TAGTTT	2	12	1243785	1243796	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
74	NC_017949	TTAAAT	2	12	1246227	1246238	50 %	50 %	0 %	0 %	Non-Coding
75	NC_017949	TATTTA	2	12	1263790	1263801	33.33 %	66.67 %	0 %	0 %	Non-Coding
76	NC_017949	AAAAAG	2	12	1301785	1301796	83.33 %	0 %	16.67 %	0 %	Non-Coding
77	NC_017949	TGAGCT	2	12	1379853	1379864	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
78	NC_017949	TTTTAC	2	12	1409657	1409668	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
79	NC_017949	AAAGGA	2	12	1413729	1413740	66.67 %	0 %	33.33 %	0 %	Non-Coding
80	NC_017949	TTTTAA	2	12	1482919	1482930	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_017949	TTTTAT	2	12	1498049	1498060	16.67 %	83.33 %	0 %	0 %	Non-Coding
82	NC_017949	TATTTT	2	12	1500789	1500800	16.67 %	83.33 %	0 %	0 %	Non-Coding
83	NC_017949	CTTATA	2	12	1527101	1527112	33.33 %	50 %	0 %	16.67 %	Non-Coding
84	NC_017949	TTTTAT	2	12	1535831	1535842	16.67 %	83.33 %	0 %	0 %	Non-Coding
85	NC_017949	GGTTAT	2	12	1614822	1614833	16.67 %	50 %	33.33 %	0 %	Non-Coding
86	NC_017949	CGTAAA	2	12	1630736	1630747	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
87	NC_017949	TATAGT	2	12	1644563	1644574	33.33 %	50 %	16.67 %	0 %	Non-Coding
88	NC_017949	AAGCTT	2	12	1652948	1652959	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
89	NC_017949	TAAATT	2	12	1654129	1654140	50 %	50 %	0 %	0 %	Non-Coding
90	NC_017949	TAAAAA	2	12	1660954	1660965	83.33 %	16.67 %	0 %	0 %	Non-Coding
91	NC_017949	ACTTGG	2	12	1674676	1674687	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
92	NC_017949	TTGAAT	2	12	1684421	1684432	33.33 %	50 %	16.67 %	0 %	Non-Coding
93	NC_017949	ATTTTG	2	12	1703753	1703764	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
94	NC_017949	TATATT	2	12	1714666	1714677	33.33 %	66.67 %	0 %	0 %	Non-Coding
95	NC_017949	TGGAAT	2	12	1720366	1720377	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
96	NC_017949	AAATCT	2	12	1729397	1729408	50 %	33.33 %	0 %	16.67 %	Non-Coding
97	NC_017949	TTTTTA	2	12	1731033	1731044	16.67 %	83.33 %	0 %	0 %	Non-Coding
98	NC_017949	TTTTAT	2	12	1793373	1793384	16.67 %	83.33 %	0 %	0 %	Non-Coding
99	NC_017949	ATTTTG	2	12	1831956	1831967	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
100	NC_017949	CTTATA	2	12	1835757	1835768	33.33 %	50 %	0 %	16.67 %	Non-Coding
101	NC_017949	TTTTAT	2	12	1913057	1913068	16.67 %	83.33 %	0 %	0 %	Non-Coding
102	NC_017949	AGTTTG	2	12	1932429	1932440	16.67 %	50 %	33.33 %	0 %	Non-Coding
103	NC_017949	TTTTGT	2	12	1934623	1934634	0 %	83.33 %	16.67 %	0 %	Non-Coding
104	NC_017949	TTATTT	2	12	1936277	1936288	16.67 %	83.33 %	0 %	0 %	Non-Coding
105	NC_017949	CTCTTT	2	12	1937609	1937620	0 %	66.67 %	0 %	33.33 %	Non-Coding
106	NC_017949	ATTTAT	2	12	1941473	1941484	33.33 %	66.67 %	0 %	0 %	Non-Coding
107	NC_017949	TTTTTA	2	12	1956310	1956321	16.67 %	83.33 %	0 %	0 %	Non-Coding
108	NC_017949	TTTCAT	2	12	1986846	1986857	16.67 %	66.67 %	0 %	16.67 %	Non-Coding
109	NC_017949	TATAAA	2	12	1990766	1990777	66.67 %	33.33 %	0 %	0 %	Non-Coding
110	NC_017949	TAAAAT	2	12	2009469	2009480	66.67 %	33.33 %	0 %	0 %	Non-Coding
111	NC_017949	AAAAGA	2	12	2022467	2022478	83.33 %	0 %	16.67 %	0 %	Non-Coding
112	NC_017949	TATCCT	2	12	2052131	2052142	16.67 %	50 %	0 %	33.33 %	Non-Coding
113	NC_017949	TATTTG	2	12	2065118	2065129	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
114	NC_017949	TTAAAA	2	12	2100282	2100293	66.67 %	33.33 %	0 %	0 %	Non-Coding
115	NC_017949	TTTACA	2	12	2128378	2128389	33.33 %	50 %	0 %	16.67 %	Non-Coding
116	NC_017949	CTTCCA	2	12	2131966	2131977	16.67 %	33.33 %	0 %	50 %	Non-Coding
117	NC_017949	AAAACA	2	12	2172168	2172179	83.33 %	0 %	0 %	16.67 %	Non-Coding
118	NC_017949	TAATAG	2	12	2176030	2176041	50 %	33.33 %	16.67 %	0 %	Non-Coding
119	NC_017949	ATAAAA	2	12	2176327	2176338	83.33 %	16.67 %	0 %	0 %	Non-Coding
120	NC_017949	TGGGAG	2	12	2182820	2182831	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
121	NC_017949	TCTTTT	2	12	2184378	2184389	0 %	83.33 %	0 %	16.67 %	Non-Coding
122	NC_017949	CATATT	2	12	2185696	2185707	33.33 %	50 %	0 %	16.67 %	Non-Coding
123	NC_017949	TGTTTT	2	12	2214965	2214976	0 %	83.33 %	16.67 %	0 %	Non-Coding
124	NC_017949	TTTTTA	2	12	2234187	2234198	16.67 %	83.33 %	0 %	0 %	Non-Coding
125	NC_017949	ACAATT	2	12	2244606	2244617	50 %	33.33 %	0 %	16.67 %	Non-Coding
126	NC_017949	TTTTTA	2	12	2244739	2244750	16.67 %	83.33 %	0 %	0 %	Non-Coding
127	NC_017949	AAAAAT	2	12	2250613	2250624	83.33 %	16.67 %	0 %	0 %	Non-Coding
128	NC_017949	ATATTT	2	12	2305365	2305376	33.33 %	66.67 %	0 %	0 %	Non-Coding
129	NC_017949	TTTTTA	2	12	2314527	2314538	16.67 %	83.33 %	0 %	0 %	Non-Coding
130	NC_017949	TGATTT	2	12	2315285	2315296	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
131	NC_017949	TAAATT	2	12	2337073	2337084	50 %	50 %	0 %	0 %	Non-Coding
132	NC_017949	TTTTAG	2	12	2341182	2341193	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
133	NC_017949	AACCAA	2	12	2354075	2354086	66.67 %	0 %	0 %	33.33 %	Non-Coding
134	NC_017949	TAAAAA	2	12	2371385	2371396	83.33 %	16.67 %	0 %	0 %	Non-Coding
135	NC_017949	CTTCCA	2	12	2372555	2372566	16.67 %	33.33 %	0 %	50 %	Non-Coding
136	NC_017949	ATTTAT	2	12	2386841	2386852	33.33 %	66.67 %	0 %	0 %	Non-Coding
137	NC_017949	ATTTTT	2	12	2389158	2389169	16.67 %	83.33 %	0 %	0 %	Non-Coding
138	NC_017949	TAAATA	2	12	2394347	2394358	66.67 %	33.33 %	0 %	0 %	Non-Coding
139	NC_017949	CTTCCA	2	12	2419924	2419935	16.67 %	33.33 %	0 %	50 %	Non-Coding
140	NC_017949	ATGTTT	2	12	2465314	2465325	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
141	NC_017949	AAAACA	2	12	2490719	2490730	83.33 %	0 %	0 %	16.67 %	Non-Coding
142	NC_017949	CCCGAA	2	12	2500853	2500864	33.33 %	0 %	16.67 %	50 %	Non-Coding
143	NC_017949	CTTCCA	2	12	2501272	2501283	16.67 %	33.33 %	0 %	50 %	Non-Coding
144	NC_017949	CTTCCA	2	12	2524777	2524788	16.67 %	33.33 %	0 %	50 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.