Hexa-nucleotide Repeats of Haloferax mediterranei ATCC 33500 plasmid pHM300
Total Repeats: 122
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017943 | GGACCG | 2 | 12 | 5657 | 5668 | 16.67 % | 0 % | 50 % | 33.33 % | 389848592 |
2 | NC_017943 | ACTCAA | 2 | 12 | 8632 | 8643 | 50 % | 16.67 % | 0 % | 33.33 % | 389848596 |
3 | NC_017943 | TTCGAG | 2 | 12 | 12585 | 12596 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
4 | NC_017943 | TCTGGG | 2 | 12 | 15624 | 15635 | 0 % | 33.33 % | 50 % | 16.67 % | Non-Coding |
5 | NC_017943 | GAACCG | 2 | 12 | 17737 | 17748 | 33.33 % | 0 % | 33.33 % | 33.33 % | 389848603 |
6 | NC_017943 | TTTAAA | 2 | 12 | 22118 | 22129 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
7 | NC_017943 | GACCAC | 2 | 12 | 22857 | 22868 | 33.33 % | 0 % | 16.67 % | 50 % | 389848608 |
8 | NC_017943 | CACGAC | 2 | 12 | 27748 | 27759 | 33.33 % | 0 % | 16.67 % | 50 % | 389848613 |
9 | NC_017943 | GTAGCC | 2 | 12 | 29782 | 29793 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 389848616 |
10 | NC_017943 | GTCGCG | 2 | 12 | 30139 | 30150 | 0 % | 16.67 % | 50 % | 33.33 % | 389848616 |
11 | NC_017943 | GGTCTG | 2 | 12 | 31495 | 31506 | 0 % | 33.33 % | 50 % | 16.67 % | 389848617 |
12 | NC_017943 | CGTCTT | 2 | 12 | 32256 | 32267 | 0 % | 50 % | 16.67 % | 33.33 % | 389848617 |
13 | NC_017943 | GTTGCC | 2 | 12 | 34666 | 34677 | 0 % | 33.33 % | 33.33 % | 33.33 % | 389848619 |
14 | NC_017943 | GACGGT | 2 | 12 | 39186 | 39197 | 16.67 % | 16.67 % | 50 % | 16.67 % | 389848623 |
15 | NC_017943 | CGTCGG | 2 | 12 | 40718 | 40729 | 0 % | 16.67 % | 50 % | 33.33 % | 389848624 |
16 | NC_017943 | CCCCGT | 2 | 12 | 40788 | 40799 | 0 % | 16.67 % | 16.67 % | 66.67 % | 389848624 |
17 | NC_017943 | GTCGAT | 2 | 12 | 42029 | 42040 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 389848625 |
18 | NC_017943 | TCGGTT | 2 | 12 | 45904 | 45915 | 0 % | 50 % | 33.33 % | 16.67 % | 389848627 |
19 | NC_017943 | TGGTAC | 2 | 12 | 46526 | 46537 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 389848627 |
20 | NC_017943 | TCCTCG | 2 | 12 | 47707 | 47718 | 0 % | 33.33 % | 16.67 % | 50 % | 389848628 |
21 | NC_017943 | GGTCGC | 2 | 12 | 48128 | 48139 | 0 % | 16.67 % | 50 % | 33.33 % | 389848628 |
22 | NC_017943 | GTCGGC | 2 | 12 | 48357 | 48368 | 0 % | 16.67 % | 50 % | 33.33 % | 389848628 |
23 | NC_017943 | TTTCGG | 2 | 12 | 48457 | 48468 | 0 % | 50 % | 33.33 % | 16.67 % | 389848628 |
24 | NC_017943 | CGGTCG | 2 | 12 | 49034 | 49045 | 0 % | 16.67 % | 50 % | 33.33 % | 389848629 |
25 | NC_017943 | AGCGCG | 2 | 12 | 52041 | 52052 | 16.67 % | 0 % | 50 % | 33.33 % | 389848631 |
26 | NC_017943 | CCACGA | 2 | 12 | 53213 | 53224 | 33.33 % | 0 % | 16.67 % | 50 % | 389848632 |
27 | NC_017943 | CAACGC | 2 | 12 | 55208 | 55219 | 33.33 % | 0 % | 16.67 % | 50 % | 389848633 |
28 | NC_017943 | CCACGA | 2 | 12 | 55843 | 55854 | 33.33 % | 0 % | 16.67 % | 50 % | 389848633 |
29 | NC_017943 | GCGAGT | 2 | 12 | 56697 | 56708 | 16.67 % | 16.67 % | 50 % | 16.67 % | 389848634 |
30 | NC_017943 | CGAGAC | 2 | 12 | 59049 | 59060 | 33.33 % | 0 % | 33.33 % | 33.33 % | 389848637 |
31 | NC_017943 | CTGCAG | 2 | 12 | 59727 | 59738 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 389848637 |
32 | NC_017943 | GTCGCC | 2 | 12 | 61152 | 61163 | 0 % | 16.67 % | 33.33 % | 50 % | 389848638 |
33 | NC_017943 | TTTGGG | 2 | 12 | 62850 | 62861 | 0 % | 50 % | 50 % | 0 % | 389848641 |
34 | NC_017943 | CGAGGT | 2 | 12 | 64740 | 64751 | 16.67 % | 16.67 % | 50 % | 16.67 % | 389848641 |
35 | NC_017943 | GGCGTC | 2 | 12 | 65083 | 65094 | 0 % | 16.67 % | 50 % | 33.33 % | 389848641 |
36 | NC_017943 | GCGCTC | 2 | 12 | 67645 | 67656 | 0 % | 16.67 % | 33.33 % | 50 % | 389848642 |
37 | NC_017943 | CGGACT | 2 | 12 | 68039 | 68050 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 389848642 |
38 | NC_017943 | TTCGGC | 2 | 12 | 70459 | 70470 | 0 % | 33.33 % | 33.33 % | 33.33 % | 389848644 |
39 | NC_017943 | TCGATT | 2 | 12 | 72665 | 72676 | 16.67 % | 50 % | 16.67 % | 16.67 % | 389848647 |
40 | NC_017943 | TTCGTC | 2 | 12 | 77949 | 77960 | 0 % | 50 % | 16.67 % | 33.33 % | 389848654 |
41 | NC_017943 | CGACGG | 2 | 12 | 79966 | 79977 | 16.67 % | 0 % | 50 % | 33.33 % | 389848657 |
42 | NC_017943 | CGGTCG | 2 | 12 | 86948 | 86959 | 0 % | 16.67 % | 50 % | 33.33 % | 389848665 |
43 | NC_017943 | CCGGGT | 2 | 12 | 96537 | 96548 | 0 % | 16.67 % | 50 % | 33.33 % | 389848675 |
44 | NC_017943 | TCGATG | 2 | 12 | 97622 | 97633 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 389848676 |
45 | NC_017943 | CATCAC | 2 | 12 | 100366 | 100377 | 33.33 % | 16.67 % | 0 % | 50 % | 389848679 |
46 | NC_017943 | CGGCGA | 2 | 12 | 102280 | 102291 | 16.67 % | 0 % | 50 % | 33.33 % | Non-Coding |
47 | NC_017943 | GGTCGC | 2 | 12 | 103148 | 103159 | 0 % | 16.67 % | 50 % | 33.33 % | 389848683 |
48 | NC_017943 | ACGTCG | 2 | 12 | 107015 | 107026 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 389848687 |
49 | NC_017943 | GCAGCG | 2 | 12 | 108149 | 108160 | 16.67 % | 0 % | 50 % | 33.33 % | 389848688 |
50 | NC_017943 | CCTTCG | 2 | 12 | 108283 | 108294 | 0 % | 33.33 % | 16.67 % | 50 % | 389848688 |
51 | NC_017943 | GCTGTC | 2 | 12 | 109100 | 109111 | 0 % | 33.33 % | 33.33 % | 33.33 % | 389848689 |
52 | NC_017943 | AGTCCC | 2 | 12 | 111580 | 111591 | 16.67 % | 16.67 % | 16.67 % | 50 % | 389848689 |
53 | NC_017943 | AGTGCC | 2 | 12 | 111917 | 111928 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 389848690 |
54 | NC_017943 | CGTCGC | 2 | 12 | 113021 | 113032 | 0 % | 16.67 % | 33.33 % | 50 % | 389848691 |
55 | NC_017943 | TGTTGC | 2 | 12 | 117902 | 117913 | 0 % | 50 % | 33.33 % | 16.67 % | 389848696 |
56 | NC_017943 | ACGGGT | 2 | 12 | 119040 | 119051 | 16.67 % | 16.67 % | 50 % | 16.67 % | 389848697 |
57 | NC_017943 | GAATCG | 2 | 12 | 120903 | 120914 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 389848697 |
58 | NC_017943 | CTTCGT | 2 | 12 | 122715 | 122726 | 0 % | 50 % | 16.67 % | 33.33 % | 389848698 |
59 | NC_017943 | TCACGC | 2 | 12 | 122900 | 122911 | 16.67 % | 16.67 % | 16.67 % | 50 % | 389848698 |
60 | NC_017943 | ATTCGA | 2 | 12 | 125111 | 125122 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 389848701 |
61 | NC_017943 | CCGACA | 2 | 12 | 145990 | 146001 | 33.33 % | 0 % | 16.67 % | 50 % | 389848715 |
62 | NC_017943 | TCGACG | 2 | 12 | 148742 | 148753 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 389848718 |
63 | NC_017943 | TGCCCG | 2 | 12 | 150469 | 150480 | 0 % | 16.67 % | 33.33 % | 50 % | 389848720 |
64 | NC_017943 | CGGTGA | 2 | 12 | 151507 | 151518 | 16.67 % | 16.67 % | 50 % | 16.67 % | 389848722 |
65 | NC_017943 | CACTCA | 2 | 12 | 152233 | 152244 | 33.33 % | 16.67 % | 0 % | 50 % | 389848722 |
66 | NC_017943 | CTTTGC | 2 | 12 | 153100 | 153111 | 0 % | 50 % | 16.67 % | 33.33 % | 389848722 |
67 | NC_017943 | ACAACG | 2 | 12 | 154265 | 154276 | 50 % | 0 % | 16.67 % | 33.33 % | 389848723 |
68 | NC_017943 | ATTCGT | 2 | 12 | 157473 | 157484 | 16.67 % | 50 % | 16.67 % | 16.67 % | 389848726 |
69 | NC_017943 | CGACGC | 2 | 12 | 159720 | 159731 | 16.67 % | 0 % | 33.33 % | 50 % | 389848728 |
70 | NC_017943 | CCGATG | 2 | 12 | 163142 | 163153 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 389848731 |
71 | NC_017943 | TTCGAA | 2 | 12 | 168131 | 168142 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 389848736 |
72 | NC_017943 | CACCGA | 2 | 12 | 173033 | 173044 | 33.33 % | 0 % | 16.67 % | 50 % | 389848743 |
73 | NC_017943 | CGTCAG | 2 | 12 | 175050 | 175061 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 389848744 |
74 | NC_017943 | CATCGG | 2 | 12 | 177151 | 177162 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 389848746 |
75 | NC_017943 | TCGGTA | 2 | 12 | 177171 | 177182 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 389848746 |
76 | NC_017943 | GCGTTG | 2 | 12 | 179523 | 179534 | 0 % | 33.33 % | 50 % | 16.67 % | Non-Coding |
77 | NC_017943 | AAGCCG | 2 | 12 | 181574 | 181585 | 33.33 % | 0 % | 33.33 % | 33.33 % | 389848750 |
78 | NC_017943 | GGTCGA | 2 | 12 | 185038 | 185049 | 16.67 % | 16.67 % | 50 % | 16.67 % | 389848752 |
79 | NC_017943 | TCGTAC | 2 | 12 | 188623 | 188634 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 389848755 |
80 | NC_017943 | ACCAGT | 2 | 12 | 192311 | 192322 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 389848759 |
81 | NC_017943 | CGAACT | 2 | 12 | 192678 | 192689 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 389848759 |
82 | NC_017943 | GTCTCG | 2 | 12 | 196228 | 196239 | 0 % | 33.33 % | 33.33 % | 33.33 % | 389848763 |
83 | NC_017943 | ACGGTG | 2 | 12 | 197631 | 197642 | 16.67 % | 16.67 % | 50 % | 16.67 % | 389848763 |
84 | NC_017943 | GCGACG | 2 | 12 | 205063 | 205074 | 16.67 % | 0 % | 50 % | 33.33 % | 389848771 |
85 | NC_017943 | CGACGG | 2 | 12 | 208692 | 208703 | 16.67 % | 0 % | 50 % | 33.33 % | 389848774 |
86 | NC_017943 | TGAGGT | 2 | 12 | 211046 | 211057 | 16.67 % | 33.33 % | 50 % | 0 % | 389848775 |
87 | NC_017943 | TCTACA | 2 | 12 | 214404 | 214415 | 33.33 % | 33.33 % | 0 % | 33.33 % | 389848777 |
88 | NC_017943 | CACGTA | 2 | 12 | 214651 | 214662 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 389848777 |
89 | NC_017943 | GACAGA | 2 | 12 | 216170 | 216181 | 50 % | 0 % | 33.33 % | 16.67 % | 389848779 |
90 | NC_017943 | AGTCGA | 2 | 12 | 219204 | 219215 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 389848781 |
91 | NC_017943 | TCGATG | 2 | 12 | 220527 | 220538 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 389848782 |
92 | NC_017943 | GTGACG | 2 | 12 | 224547 | 224558 | 16.67 % | 16.67 % | 50 % | 16.67 % | 389848786 |
93 | NC_017943 | TCCAGG | 2 | 12 | 225209 | 225220 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 389848787 |
94 | NC_017943 | AGTGAA | 2 | 12 | 226446 | 226457 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
95 | NC_017943 | GAACCG | 2 | 12 | 227376 | 227387 | 33.33 % | 0 % | 33.33 % | 33.33 % | 389848789 |
96 | NC_017943 | AGTGGA | 2 | 12 | 227848 | 227859 | 33.33 % | 16.67 % | 50 % | 0 % | 389848790 |
97 | NC_017943 | ATCCGT | 2 | 12 | 229375 | 229386 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 389848793 |
98 | NC_017943 | ACCCCA | 2 | 12 | 229716 | 229727 | 33.33 % | 0 % | 0 % | 66.67 % | 389848793 |
99 | NC_017943 | TCGCAA | 2 | 12 | 230435 | 230446 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 389848794 |
100 | NC_017943 | AGCGCG | 2 | 12 | 230498 | 230509 | 16.67 % | 0 % | 50 % | 33.33 % | 389848794 |
101 | NC_017943 | CGACTT | 2 | 12 | 236661 | 236672 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 389848800 |
102 | NC_017943 | GTGAGA | 2 | 12 | 249274 | 249285 | 33.33 % | 16.67 % | 50 % | 0 % | 389848815 |
103 | NC_017943 | CACAGT | 2 | 12 | 258661 | 258672 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 389848826 |
104 | NC_017943 | CGTTCT | 2 | 12 | 261323 | 261334 | 0 % | 50 % | 16.67 % | 33.33 % | 389848830 |
105 | NC_017943 | GCGCTC | 2 | 12 | 266074 | 266085 | 0 % | 16.67 % | 33.33 % | 50 % | 389848832 |
106 | NC_017943 | ATTCGG | 2 | 12 | 266331 | 266342 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 389848832 |
107 | NC_017943 | GTGAAA | 2 | 12 | 267823 | 267834 | 50 % | 16.67 % | 33.33 % | 0 % | 389848832 |
108 | NC_017943 | GCGGTC | 2 | 12 | 269853 | 269864 | 0 % | 16.67 % | 50 % | 33.33 % | 389848833 |
109 | NC_017943 | CGGTGA | 2 | 12 | 270074 | 270085 | 16.67 % | 16.67 % | 50 % | 16.67 % | 389848833 |
110 | NC_017943 | CTCGAA | 2 | 12 | 271515 | 271526 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 389848833 |
111 | NC_017943 | CGGACA | 2 | 12 | 272404 | 272415 | 33.33 % | 0 % | 33.33 % | 33.33 % | 389848833 |
112 | NC_017943 | CCCGGA | 2 | 12 | 272480 | 272491 | 16.67 % | 0 % | 33.33 % | 50 % | 389848833 |
113 | NC_017943 | CGGAGT | 2 | 12 | 275751 | 275762 | 16.67 % | 16.67 % | 50 % | 16.67 % | 389848834 |
114 | NC_017943 | TCGACG | 2 | 12 | 276288 | 276299 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 389848834 |
115 | NC_017943 | GAGTCG | 2 | 12 | 278661 | 278672 | 16.67 % | 16.67 % | 50 % | 16.67 % | 389848838 |
116 | NC_017943 | CGACAC | 2 | 12 | 281041 | 281052 | 33.33 % | 0 % | 16.67 % | 50 % | 389848839 |
117 | NC_017943 | AAATAT | 2 | 12 | 286038 | 286049 | 66.67 % | 33.33 % | 0 % | 0 % | Non-Coding |
118 | NC_017943 | GCGTAG | 2 | 12 | 287969 | 287980 | 16.67 % | 16.67 % | 50 % | 16.67 % | Non-Coding |
119 | NC_017943 | TCGCAA | 2 | 12 | 289912 | 289923 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 389848849 |
120 | NC_017943 | CTCGCG | 2 | 12 | 298211 | 298222 | 0 % | 16.67 % | 33.33 % | 50 % | 389848857 |
121 | NC_017943 | CAGCAC | 2 | 12 | 305619 | 305630 | 33.33 % | 0 % | 16.67 % | 50 % | Non-Coding |
122 | NC_017943 | GGGCGT | 2 | 12 | 318529 | 318540 | 0 % | 16.67 % | 66.67 % | 16.67 % | 389848875 |