Tetra-nucleotide Non-Coding Repeats of Haloferax mediterranei ATCC 33500 plasmid pHM300
Total Repeats: 139
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017943 | CTAC | 2 | 8 | 3204 | 3211 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
2 | NC_017943 | TTGA | 2 | 8 | 3803 | 3810 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
3 | NC_017943 | TCGC | 2 | 8 | 4578 | 4585 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
4 | NC_017943 | GACG | 2 | 8 | 10598 | 10605 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
5 | NC_017943 | ACTT | 2 | 8 | 12239 | 12246 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
6 | NC_017943 | TTTC | 2 | 8 | 12577 | 12584 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
7 | NC_017943 | GGAT | 2 | 8 | 15767 | 15774 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
8 | NC_017943 | GCAG | 2 | 8 | 16016 | 16023 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
9 | NC_017943 | TAGC | 2 | 8 | 20774 | 20781 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
10 | NC_017943 | CGAG | 2 | 8 | 20930 | 20937 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
11 | NC_017943 | TGGG | 2 | 8 | 21588 | 21595 | 0 % | 25 % | 75 % | 0 % | Non-Coding |
12 | NC_017943 | GTTC | 2 | 8 | 21629 | 21636 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
13 | NC_017943 | CCTG | 2 | 8 | 25736 | 25743 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
14 | NC_017943 | TCGT | 2 | 8 | 27164 | 27171 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
15 | NC_017943 | ACCC | 2 | 8 | 29595 | 29602 | 25 % | 0 % | 0 % | 75 % | Non-Coding |
16 | NC_017943 | GCTA | 2 | 8 | 38248 | 38255 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
17 | NC_017943 | TTGG | 2 | 8 | 39712 | 39719 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
18 | NC_017943 | TCCC | 2 | 8 | 42987 | 42994 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
19 | NC_017943 | GAAC | 2 | 8 | 45451 | 45458 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
20 | NC_017943 | TTCT | 2 | 8 | 54378 | 54385 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
21 | NC_017943 | ATGA | 2 | 8 | 58011 | 58018 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
22 | NC_017943 | ATTT | 2 | 8 | 59871 | 59878 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
23 | NC_017943 | GACA | 2 | 8 | 81673 | 81680 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
24 | NC_017943 | ATAG | 3 | 12 | 82283 | 82294 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
25 | NC_017943 | GTTG | 2 | 8 | 82347 | 82354 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
26 | NC_017943 | AGTC | 2 | 8 | 87748 | 87755 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
27 | NC_017943 | ACTG | 2 | 8 | 87775 | 87782 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
28 | NC_017943 | CGGT | 2 | 8 | 99485 | 99492 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
29 | NC_017943 | CGAG | 2 | 8 | 102191 | 102198 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
30 | NC_017943 | CCGC | 2 | 8 | 102259 | 102266 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
31 | NC_017943 | CTCA | 2 | 8 | 107753 | 107760 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
32 | NC_017943 | CTAA | 2 | 8 | 115789 | 115796 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
33 | NC_017943 | GTTA | 2 | 8 | 115800 | 115807 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
34 | NC_017943 | CATA | 2 | 8 | 118043 | 118050 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
35 | NC_017943 | CCGC | 2 | 8 | 121266 | 121273 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
36 | NC_017943 | CATT | 2 | 8 | 121297 | 121304 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
37 | NC_017943 | ATGT | 2 | 8 | 121353 | 121360 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
38 | NC_017943 | GCAC | 2 | 8 | 121846 | 121853 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
39 | NC_017943 | CGAC | 2 | 8 | 123566 | 123573 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
40 | NC_017943 | TGTC | 2 | 8 | 123927 | 123934 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
41 | NC_017943 | TTGG | 2 | 8 | 123966 | 123973 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
42 | NC_017943 | TCTA | 2 | 8 | 124131 | 124138 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
43 | NC_017943 | AGTG | 2 | 8 | 132022 | 132029 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
44 | NC_017943 | GTCG | 2 | 8 | 133014 | 133021 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
45 | NC_017943 | CAGT | 2 | 8 | 135077 | 135084 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
46 | NC_017943 | GTCG | 2 | 8 | 135086 | 135093 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
47 | NC_017943 | CGAG | 2 | 8 | 136479 | 136486 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
48 | NC_017943 | CAAG | 2 | 8 | 136700 | 136707 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
49 | NC_017943 | AATC | 2 | 8 | 137466 | 137473 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
50 | NC_017943 | GATT | 2 | 8 | 137943 | 137950 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
51 | NC_017943 | TGCT | 2 | 8 | 140239 | 140246 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
52 | NC_017943 | CGGC | 2 | 8 | 140252 | 140259 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
53 | NC_017943 | TCCC | 2 | 8 | 142472 | 142479 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
54 | NC_017943 | ACAA | 2 | 8 | 144314 | 144321 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
55 | NC_017943 | TCGC | 2 | 8 | 151365 | 151372 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
56 | NC_017943 | CCGC | 2 | 8 | 151437 | 151444 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
57 | NC_017943 | CTGT | 3 | 12 | 153700 | 153711 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
58 | NC_017943 | CGAG | 2 | 8 | 153767 | 153774 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
59 | NC_017943 | GTCT | 2 | 8 | 153914 | 153921 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
60 | NC_017943 | CACC | 2 | 8 | 154020 | 154027 | 25 % | 0 % | 0 % | 75 % | Non-Coding |
61 | NC_017943 | CACT | 2 | 8 | 154068 | 154075 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
62 | NC_017943 | GGAA | 2 | 8 | 156052 | 156059 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
63 | NC_017943 | CGAG | 2 | 8 | 156583 | 156590 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
64 | NC_017943 | CGTT | 2 | 8 | 158446 | 158453 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
65 | NC_017943 | ACTG | 3 | 12 | 158892 | 158903 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
66 | NC_017943 | AGAT | 2 | 8 | 159810 | 159817 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
67 | NC_017943 | CGGT | 2 | 8 | 162687 | 162694 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
68 | NC_017943 | GTTG | 2 | 8 | 164182 | 164189 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
69 | NC_017943 | GGGA | 2 | 8 | 171709 | 171716 | 25 % | 0 % | 75 % | 0 % | Non-Coding |
70 | NC_017943 | GCGT | 2 | 8 | 171724 | 171731 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
71 | NC_017943 | ACTA | 2 | 8 | 172043 | 172050 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
72 | NC_017943 | TAAA | 2 | 8 | 172181 | 172188 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
73 | NC_017943 | TGTC | 2 | 8 | 172231 | 172238 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
74 | NC_017943 | ACTA | 2 | 8 | 180626 | 180633 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
75 | NC_017943 | TCCC | 2 | 8 | 180877 | 180884 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
76 | NC_017943 | CCAA | 2 | 8 | 181064 | 181071 | 50 % | 0 % | 0 % | 50 % | Non-Coding |
77 | NC_017943 | GACA | 2 | 8 | 185721 | 185728 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
78 | NC_017943 | GAGG | 2 | 8 | 185899 | 185906 | 25 % | 0 % | 75 % | 0 % | Non-Coding |
79 | NC_017943 | ACGG | 2 | 8 | 187487 | 187494 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
80 | NC_017943 | TGGT | 2 | 8 | 189123 | 189130 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
81 | NC_017943 | GGTT | 2 | 8 | 189226 | 189233 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
82 | NC_017943 | GTGG | 2 | 8 | 189618 | 189625 | 0 % | 25 % | 75 % | 0 % | Non-Coding |
83 | NC_017943 | GAGT | 2 | 8 | 195031 | 195038 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
84 | NC_017943 | CCTG | 2 | 8 | 195313 | 195320 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
85 | NC_017943 | GTTC | 2 | 8 | 195369 | 195376 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
86 | NC_017943 | TGCT | 2 | 8 | 195783 | 195790 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
87 | NC_017943 | GTGA | 2 | 8 | 198741 | 198748 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
88 | NC_017943 | CTTC | 2 | 8 | 198777 | 198784 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
89 | NC_017943 | ATTG | 2 | 8 | 200915 | 200922 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
90 | NC_017943 | TCCC | 2 | 8 | 203527 | 203534 | 0 % | 25 % | 0 % | 75 % | Non-Coding |
91 | NC_017943 | AACT | 2 | 8 | 204408 | 204415 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
92 | NC_017943 | TAGT | 2 | 8 | 206874 | 206881 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
93 | NC_017943 | CGTC | 2 | 8 | 206901 | 206908 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
94 | NC_017943 | CCCA | 2 | 8 | 206985 | 206992 | 25 % | 0 % | 0 % | 75 % | Non-Coding |
95 | NC_017943 | TCAC | 2 | 8 | 207009 | 207016 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
96 | NC_017943 | ACAT | 2 | 8 | 207236 | 207243 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
97 | NC_017943 | TAGT | 2 | 8 | 236351 | 236358 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
98 | NC_017943 | CAGG | 2 | 8 | 237278 | 237285 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
99 | NC_017943 | GCCC | 2 | 8 | 238197 | 238204 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
100 | NC_017943 | TCGT | 2 | 8 | 241504 | 241511 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
101 | NC_017943 | TCGG | 2 | 8 | 241731 | 241738 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
102 | NC_017943 | CGAC | 2 | 8 | 242196 | 242203 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
103 | NC_017943 | TAGT | 2 | 8 | 242233 | 242240 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
104 | NC_017943 | ACAA | 2 | 8 | 243557 | 243564 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
105 | NC_017943 | CTTC | 2 | 8 | 245438 | 245445 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
106 | NC_017943 | CAGC | 2 | 8 | 248479 | 248486 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
107 | NC_017943 | CTGA | 2 | 8 | 250049 | 250056 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
108 | NC_017943 | CGAC | 2 | 8 | 253962 | 253969 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
109 | NC_017943 | GCCG | 2 | 8 | 257084 | 257091 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
110 | NC_017943 | GACA | 2 | 8 | 257261 | 257268 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
111 | NC_017943 | AGAA | 2 | 8 | 257298 | 257305 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
112 | NC_017943 | GGTG | 2 | 8 | 260420 | 260427 | 0 % | 25 % | 75 % | 0 % | Non-Coding |
113 | NC_017943 | ACAG | 2 | 8 | 285561 | 285568 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
114 | NC_017943 | AACG | 2 | 8 | 296603 | 296610 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
115 | NC_017943 | GCTG | 2 | 8 | 296713 | 296720 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
116 | NC_017943 | AGTG | 2 | 8 | 299169 | 299176 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
117 | NC_017943 | TATC | 2 | 8 | 301504 | 301511 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
118 | NC_017943 | CCCG | 2 | 8 | 302221 | 302228 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
119 | NC_017943 | AAGT | 2 | 8 | 302336 | 302343 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
120 | NC_017943 | GAAG | 2 | 8 | 302670 | 302677 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
121 | NC_017943 | TGGC | 2 | 8 | 305506 | 305513 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
122 | NC_017943 | ATGA | 2 | 8 | 305763 | 305770 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
123 | NC_017943 | CGGG | 2 | 8 | 307694 | 307701 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
124 | NC_017943 | TTCA | 2 | 8 | 310155 | 310162 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
125 | NC_017943 | CATT | 2 | 8 | 311052 | 311059 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
126 | NC_017943 | TGTT | 2 | 8 | 311081 | 311088 | 0 % | 75 % | 25 % | 0 % | Non-Coding |
127 | NC_017943 | TAAT | 2 | 8 | 311094 | 311101 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
128 | NC_017943 | ACAT | 2 | 8 | 312051 | 312058 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
129 | NC_017943 | TCAA | 2 | 8 | 313930 | 313937 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
130 | NC_017943 | CTGT | 2 | 8 | 314039 | 314046 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
131 | NC_017943 | TTAA | 2 | 8 | 316601 | 316608 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
132 | NC_017943 | GACA | 2 | 8 | 316726 | 316733 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
133 | NC_017943 | TACG | 2 | 8 | 316820 | 316827 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
134 | NC_017943 | TTCA | 2 | 8 | 320396 | 320403 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
135 | NC_017943 | AGTA | 2 | 8 | 320556 | 320563 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
136 | NC_017943 | AGTT | 2 | 8 | 321323 | 321330 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
137 | NC_017943 | TTAT | 2 | 8 | 321364 | 321371 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
138 | NC_017943 | TCGT | 2 | 8 | 321609 | 321616 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
139 | NC_017943 | TTTC | 2 | 8 | 321711 | 321718 | 0 % | 75 % | 0 % | 25 % | Non-Coding |