MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia crocidurae str. Achema plasmid unnamed

Total Repeats: 146

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017817	CTT	2	6	527	532	0 %	66.67 %	0 %	33.33 %	Non-Coding
2	NC_017817	CCT	2	6	554	559	0 %	33.33 %	0 %	66.67 %	Non-Coding
3	NC_017817	TAA	2	6	591	596	66.67 %	33.33 %	0 %	0 %	Non-Coding
4	NC_017817	ACA	2	6	619	624	66.67 %	0 %	0 %	33.33 %	Non-Coding
5	NC_017817	TCT	2	6	2685	2690	0 %	66.67 %	0 %	33.33 %	Non-Coding
6	NC_017817	ACA	2	6	2705	2710	66.67 %	0 %	0 %	33.33 %	Non-Coding
7	NC_017817	CCA	2	6	2711	2716	33.33 %	0 %	0 %	66.67 %	Non-Coding
8	NC_017817	CAG	3	9	2721	2729	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
9	NC_017817	AGT	2	6	2741	2746	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
10	NC_017817	TCA	2	6	2747	2752	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
11	NC_017817	CCT	2	6	2778	2783	0 %	33.33 %	0 %	66.67 %	Non-Coding
12	NC_017817	TAT	2	6	2794	2799	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_017817	TTA	2	6	3139	3144	33.33 %	66.67 %	0 %	0 %	Non-Coding
14	NC_017817	CTT	2	6	3180	3185	0 %	66.67 %	0 %	33.33 %	Non-Coding
15	NC_017817	ATG	2	6	3257	3262	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
16	NC_017817	CTT	2	6	3586	3591	0 %	66.67 %	0 %	33.33 %	Non-Coding
17	NC_017817	TAA	2	6	3595	3600	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_017817	AAT	2	6	3622	3627	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_017817	CAT	2	6	4615	4620	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
20	NC_017817	TCT	3	9	4638	4646	0 %	66.67 %	0 %	33.33 %	Non-Coding
21	NC_017817	ACC	2	6	4661	4666	33.33 %	0 %	0 %	66.67 %	Non-Coding
22	NC_017817	TTA	2	6	4690	4695	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_017817	TAA	2	6	4713	4718	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_017817	ACT	2	6	4788	4793	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
25	NC_017817	ATA	2	6	4803	4808	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_017817	TCT	2	6	4817	4822	0 %	66.67 %	0 %	33.33 %	Non-Coding
27	NC_017817	TTA	2	6	5194	5199	33.33 %	66.67 %	0 %	0 %	Non-Coding
28	NC_017817	TAT	2	6	6063	6068	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_017817	ATT	2	6	6554	6559	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_017817	TAA	2	6	7818	7823	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_017817	TCA	2	6	7853	7858	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_017817	ATT	2	6	8878	8883	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_017817	CTC	2	6	8901	8906	0 %	33.33 %	0 %	66.67 %	Non-Coding
34	NC_017817	TTG	2	6	8947	8952	0 %	66.67 %	33.33 %	0 %	Non-Coding
35	NC_017817	AAC	2	6	9076	9081	66.67 %	0 %	0 %	33.33 %	Non-Coding
36	NC_017817	TGT	2	6	10359	10364	0 %	66.67 %	33.33 %	0 %	Non-Coding
37	NC_017817	CTG	2	6	12174	12179	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
38	NC_017817	GCT	2	6	12197	12202	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
39	NC_017817	CTT	2	6	12331	12336	0 %	66.67 %	0 %	33.33 %	Non-Coding
40	NC_017817	TTC	2	6	12340	12345	0 %	66.67 %	0 %	33.33 %	Non-Coding
41	NC_017817	TTC	2	6	12501	12506	0 %	66.67 %	0 %	33.33 %	Non-Coding
42	NC_017817	TGT	2	6	12525	12530	0 %	66.67 %	33.33 %	0 %	Non-Coding
43	NC_017817	ACC	2	6	12577	12582	33.33 %	0 %	0 %	66.67 %	Non-Coding
44	NC_017817	TCC	2	6	12693	12698	0 %	33.33 %	0 %	66.67 %	Non-Coding
45	NC_017817	TCC	3	9	12727	12735	0 %	33.33 %	0 %	66.67 %	Non-Coding
46	NC_017817	TCC	3	9	12745	12753	0 %	33.33 %	0 %	66.67 %	Non-Coding
47	NC_017817	CAC	3	9	12793	12801	33.33 %	0 %	0 %	66.67 %	Non-Coding
48	NC_017817	TCT	2	6	12879	12884	0 %	66.67 %	0 %	33.33 %	Non-Coding
49	NC_017817	TAT	2	6	12924	12929	33.33 %	66.67 %	0 %	0 %	Non-Coding
50	NC_017817	ATT	2	6	15621	15626	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_017817	ATT	2	6	15738	15743	33.33 %	66.67 %	0 %	0 %	Non-Coding
52	NC_017817	GTT	2	6	15770	15775	0 %	66.67 %	33.33 %	0 %	Non-Coding
53	NC_017817	ACT	2	6	15817	15822	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
54	NC_017817	TAA	2	6	15833	15838	66.67 %	33.33 %	0 %	0 %	Non-Coding
55	NC_017817	ATA	2	6	15916	15921	66.67 %	33.33 %	0 %	0 %	Non-Coding
56	NC_017817	CTT	2	6	16271	16276	0 %	66.67 %	0 %	33.33 %	Non-Coding
57	NC_017817	ATA	2	6	16350	16355	66.67 %	33.33 %	0 %	0 %	Non-Coding
58	NC_017817	ATT	2	6	17150	17155	33.33 %	66.67 %	0 %	0 %	Non-Coding
59	NC_017817	ACT	2	6	17198	17203	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
60	NC_017817	ATA	2	6	17224	17229	66.67 %	33.33 %	0 %	0 %	Non-Coding
61	NC_017817	ACA	2	6	17245	17250	66.67 %	0 %	0 %	33.33 %	Non-Coding
62	NC_017817	AAT	2	6	17255	17260	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_017817	AGT	2	6	17354	17359	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
64	NC_017817	ATA	3	9	17370	17378	66.67 %	33.33 %	0 %	0 %	Non-Coding
65	NC_017817	AAC	2	6	17418	17423	66.67 %	0 %	0 %	33.33 %	Non-Coding
66	NC_017817	GAA	2	6	17447	17452	66.67 %	0 %	33.33 %	0 %	Non-Coding
67	NC_017817	AAG	2	6	17505	17510	66.67 %	0 %	33.33 %	0 %	Non-Coding
68	NC_017817	CTA	2	6	19276	19281	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
69	NC_017817	ATA	2	6	20238	20243	66.67 %	33.33 %	0 %	0 %	Non-Coding
70	NC_017817	ATT	2	6	20246	20251	33.33 %	66.67 %	0 %	0 %	Non-Coding
71	NC_017817	TTA	2	6	20523	20528	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_017817	TAA	2	6	20543	20548	66.67 %	33.33 %	0 %	0 %	Non-Coding
73	NC_017817	ATT	2	6	21198	21203	33.33 %	66.67 %	0 %	0 %	Non-Coding
74	NC_017817	CAA	2	6	22534	22539	66.67 %	0 %	0 %	33.33 %	Non-Coding
75	NC_017817	CTC	2	6	22550	22555	0 %	33.33 %	0 %	66.67 %	Non-Coding
76	NC_017817	TTC	2	6	23407	23412	0 %	66.67 %	0 %	33.33 %	Non-Coding
77	NC_017817	TAT	2	6	23417	23422	33.33 %	66.67 %	0 %	0 %	Non-Coding
78	NC_017817	TTA	3	9	23425	23433	33.33 %	66.67 %	0 %	0 %	Non-Coding
79	NC_017817	TAT	3	9	23435	23443	33.33 %	66.67 %	0 %	0 %	Non-Coding
80	NC_017817	ATT	2	6	23490	23495	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_017817	GAT	2	6	23510	23515	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
82	NC_017817	GTT	2	6	23528	23533	0 %	66.67 %	33.33 %	0 %	Non-Coding
83	NC_017817	TCT	2	6	23542	23547	0 %	66.67 %	0 %	33.33 %	Non-Coding
84	NC_017817	TTG	2	6	23734	23739	0 %	66.67 %	33.33 %	0 %	Non-Coding
85	NC_017817	TTA	3	9	23746	23754	33.33 %	66.67 %	0 %	0 %	Non-Coding
86	NC_017817	AGT	2	6	23756	23761	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
87	NC_017817	ATA	3	9	24054	24062	66.67 %	33.33 %	0 %	0 %	Non-Coding
88	NC_017817	ATA	2	6	24072	24077	66.67 %	33.33 %	0 %	0 %	Non-Coding
89	NC_017817	ACA	2	6	24086	24091	66.67 %	0 %	0 %	33.33 %	Non-Coding
90	NC_017817	TAA	2	6	24094	24099	66.67 %	33.33 %	0 %	0 %	Non-Coding
91	NC_017817	CAA	2	6	24119	24124	66.67 %	0 %	0 %	33.33 %	Non-Coding
92	NC_017817	CAT	2	6	26121	26126	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
93	NC_017817	TAT	2	6	26492	26497	33.33 %	66.67 %	0 %	0 %	Non-Coding
94	NC_017817	ATT	2	6	26502	26507	33.33 %	66.67 %	0 %	0 %	Non-Coding
95	NC_017817	TAT	3	9	26510	26518	33.33 %	66.67 %	0 %	0 %	Non-Coding
96	NC_017817	CTT	2	6	26682	26687	0 %	66.67 %	0 %	33.33 %	Non-Coding
97	NC_017817	GTA	2	6	26695	26700	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
98	NC_017817	ATG	2	6	26760	26765	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
99	NC_017817	ATT	2	6	26774	26779	33.33 %	66.67 %	0 %	0 %	Non-Coding
100	NC_017817	ATG	2	6	27104	27109	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
101	NC_017817	ATA	2	6	27117	27122	66.67 %	33.33 %	0 %	0 %	Non-Coding
102	NC_017817	TAC	2	6	27146	27151	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
103	NC_017817	CTT	2	6	27176	27181	0 %	66.67 %	0 %	33.33 %	Non-Coding
104	NC_017817	TCA	2	6	27213	27218	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
105	NC_017817	ATA	2	6	27292	27297	66.67 %	33.33 %	0 %	0 %	Non-Coding
106	NC_017817	TGC	2	6	27349	27354	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
107	NC_017817	TTA	2	6	27442	27447	33.33 %	66.67 %	0 %	0 %	Non-Coding
108	NC_017817	TAG	2	6	27567	27572	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
109	NC_017817	ATT	2	6	29058	29063	33.33 %	66.67 %	0 %	0 %	Non-Coding
110	NC_017817	ATT	2	6	29087	29092	33.33 %	66.67 %	0 %	0 %	Non-Coding
111	NC_017817	TAT	2	6	29159	29164	33.33 %	66.67 %	0 %	0 %	Non-Coding
112	NC_017817	ATA	2	6	29870	29875	66.67 %	33.33 %	0 %	0 %	Non-Coding
113	NC_017817	TAA	2	6	29907	29912	66.67 %	33.33 %	0 %	0 %	Non-Coding
114	NC_017817	TAT	2	6	29934	29939	33.33 %	66.67 %	0 %	0 %	Non-Coding
115	NC_017817	ATT	3	9	29952	29960	33.33 %	66.67 %	0 %	0 %	Non-Coding
116	NC_017817	TGA	2	6	30044	30049	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
117	NC_017817	AAT	2	6	30165	30170	66.67 %	33.33 %	0 %	0 %	Non-Coding
118	NC_017817	AGA	2	6	30173	30178	66.67 %	0 %	33.33 %	0 %	Non-Coding
119	NC_017817	GAA	2	6	30465	30470	66.67 %	0 %	33.33 %	0 %	Non-Coding
120	NC_017817	AAT	2	6	30477	30482	66.67 %	33.33 %	0 %	0 %	Non-Coding
121	NC_017817	AGT	2	6	30519	30524	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
122	NC_017817	AAT	2	6	30975	30980	66.67 %	33.33 %	0 %	0 %	Non-Coding
123	NC_017817	AAT	2	6	31091	31096	66.67 %	33.33 %	0 %	0 %	Non-Coding
124	NC_017817	TGG	2	6	31243	31248	0 %	33.33 %	66.67 %	0 %	Non-Coding
125	NC_017817	GGA	2	6	31268	31273	33.33 %	0 %	66.67 %	0 %	Non-Coding
126	NC_017817	TGT	2	6	31282	31287	0 %	66.67 %	33.33 %	0 %	Non-Coding
127	NC_017817	CAA	2	6	31305	31310	66.67 %	0 %	0 %	33.33 %	Non-Coding
128	NC_017817	AAG	2	6	31332	31337	66.67 %	0 %	33.33 %	0 %	Non-Coding
129	NC_017817	ATC	2	6	31392	31397	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
130	NC_017817	ATT	2	6	31404	31409	33.33 %	66.67 %	0 %	0 %	Non-Coding
131	NC_017817	ATA	2	6	31428	31433	66.67 %	33.33 %	0 %	0 %	Non-Coding
132	NC_017817	AAG	2	6	31506	31511	66.67 %	0 %	33.33 %	0 %	Non-Coding
133	NC_017817	TAC	2	6	31548	31553	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
134	NC_017817	TCT	2	6	33345	33350	0 %	66.67 %	0 %	33.33 %	Non-Coding
135	NC_017817	ATT	2	6	33432	33437	33.33 %	66.67 %	0 %	0 %	Non-Coding
136	NC_017817	AAT	2	6	33482	33487	66.67 %	33.33 %	0 %	0 %	Non-Coding
137	NC_017817	AAT	2	6	33555	33560	66.67 %	33.33 %	0 %	0 %	Non-Coding
138	NC_017817	AGA	2	6	33566	33571	66.67 %	0 %	33.33 %	0 %	Non-Coding
139	NC_017817	AGG	2	6	33890	33895	33.33 %	0 %	66.67 %	0 %	Non-Coding
140	NC_017817	GAA	2	6	33897	33902	66.67 %	0 %	33.33 %	0 %	Non-Coding
141	NC_017817	ATA	2	6	35065	35070	66.67 %	33.33 %	0 %	0 %	Non-Coding
142	NC_017817	ATT	2	6	35174	35179	33.33 %	66.67 %	0 %	0 %	Non-Coding
143	NC_017817	TTG	2	6	35219	35224	0 %	66.67 %	33.33 %	0 %	Non-Coding
144	NC_017817	TAA	2	6	35305	35310	66.67 %	33.33 %	0 %	0 %	Non-Coding
145	NC_017817	AGG	2	6	35494	35499	33.33 %	0 %	66.67 %	0 %	Non-Coding
146	NC_017817	GAA	2	6	35501	35506	66.67 %	0 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.