MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Rahnella aquatilis HX2 plasmid PRA2

Total Repeats: 49

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017807	CCG	2	6	1	6	0 %	0 %	33.33 %	66.67 %	Non-Coding
2	NC_017807	CGC	2	6	41	46	0 %	0 %	33.33 %	66.67 %	Non-Coding
3	NC_017807	CCG	2	6	135	140	0 %	0 %	33.33 %	66.67 %	Non-Coding
4	NC_017807	GCG	2	6	173	178	0 %	0 %	66.67 %	33.33 %	Non-Coding
5	NC_017807	CGT	2	6	197	202	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
6	NC_017807	GCG	2	6	657	662	0 %	0 %	66.67 %	33.33 %	Non-Coding
7	NC_017807	CAT	2	6	710	715	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8	NC_017807	ATA	2	6	1966	1971	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_017807	GCG	2	6	2616	2621	0 %	0 %	66.67 %	33.33 %	Non-Coding
10	NC_017807	TCA	2	6	2713	2718	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
11	NC_017807	ATC	2	6	3014	3019	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12	NC_017807	AAT	2	6	3210	3215	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_017807	CCA	2	6	3218	3223	33.33 %	0 %	0 %	66.67 %	Non-Coding
14	NC_017807	CTA	2	6	4426	4431	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
15	NC_017807	GGC	2	6	9983	9988	0 %	0 %	66.67 %	33.33 %	Non-Coding
16	NC_017807	CGC	2	6	9991	9996	0 %	0 %	33.33 %	66.67 %	Non-Coding
17	NC_017807	CTT	2	6	20173	20178	0 %	66.67 %	0 %	33.33 %	Non-Coding
18	NC_017807	TAG	2	6	21331	21336	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
19	NC_017807	GCC	2	6	21358	21363	0 %	0 %	33.33 %	66.67 %	Non-Coding
20	NC_017807	CGT	2	6	21377	21382	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
21	NC_017807	GAA	2	6	21396	21401	66.67 %	0 %	33.33 %	0 %	Non-Coding
22	NC_017807	TAT	2	6	27967	27972	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_017807	TGT	2	6	27976	27981	0 %	66.67 %	33.33 %	0 %	Non-Coding
24	NC_017807	CTT	2	6	28554	28559	0 %	66.67 %	0 %	33.33 %	Non-Coding
25	NC_017807	GGC	2	6	28588	28593	0 %	0 %	66.67 %	33.33 %	Non-Coding
26	NC_017807	CTT	2	6	37039	37044	0 %	66.67 %	0 %	33.33 %	Non-Coding
27	NC_017807	GTT	2	6	38673	38678	0 %	66.67 %	33.33 %	0 %	Non-Coding
28	NC_017807	CTC	2	6	38721	38726	0 %	33.33 %	0 %	66.67 %	Non-Coding
29	NC_017807	AAT	2	6	39991	39996	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_017807	AAC	2	6	40190	40195	66.67 %	0 %	0 %	33.33 %	Non-Coding
31	NC_017807	CAT	2	6	40198	40203	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_017807	AGA	2	6	40217	40222	66.67 %	0 %	33.33 %	0 %	Non-Coding
33	NC_017807	ACA	2	6	40269	40274	66.67 %	0 %	0 %	33.33 %	Non-Coding
34	NC_017807	GCC	2	6	40345	40350	0 %	0 %	33.33 %	66.67 %	Non-Coding
35	NC_017807	TGT	2	6	40396	40401	0 %	66.67 %	33.33 %	0 %	Non-Coding
36	NC_017807	GGC	2	6	40601	40606	0 %	0 %	66.67 %	33.33 %	Non-Coding
37	NC_017807	CAT	2	6	40639	40644	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
38	NC_017807	ATA	2	6	40830	40835	66.67 %	33.33 %	0 %	0 %	Non-Coding
39	NC_017807	CAG	2	6	41525	41530	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
40	NC_017807	TGG	2	6	41531	41536	0 %	33.33 %	66.67 %	0 %	Non-Coding
41	NC_017807	AAT	2	6	41544	41549	66.67 %	33.33 %	0 %	0 %	Non-Coding
42	NC_017807	CAT	2	6	44472	44477	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
43	NC_017807	GTT	2	6	44700	44705	0 %	66.67 %	33.33 %	0 %	Non-Coding
44	NC_017807	TAT	2	6	44763	44768	33.33 %	66.67 %	0 %	0 %	Non-Coding
45	NC_017807	ATA	2	6	44922	44927	66.67 %	33.33 %	0 %	0 %	Non-Coding
46	NC_017807	CCT	2	6	45795	45800	0 %	33.33 %	0 %	66.67 %	Non-Coding
47	NC_017807	TAA	2	6	45811	45816	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_017807	AAT	2	6	46495	46500	66.67 %	33.33 %	0 %	0 %	Non-Coding
49	NC_017807	GGT	2	6	47892	47897	0 %	33.33 %	66.67 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.