MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia crocidurae str. Achema plasmid unnamed

Total Repeats: 130

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017798	ATT	2	6	37	42	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_017798	TAC	2	6	54	59	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3	NC_017798	CTT	2	6	64	69	0 %	66.67 %	0 %	33.33 %	Non-Coding
4	NC_017798	CAA	2	6	153	158	66.67 %	0 %	0 %	33.33 %	Non-Coding
5	NC_017798	CTT	2	6	181	186	0 %	66.67 %	0 %	33.33 %	Non-Coding
6	NC_017798	ATA	2	6	287	292	66.67 %	33.33 %	0 %	0 %	Non-Coding
7	NC_017798	ATA	2	6	363	368	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_017798	TAA	2	6	386	391	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_017798	TTA	2	6	479	484	33.33 %	66.67 %	0 %	0 %	Non-Coding
10	NC_017798	TAT	2	6	1130	1135	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_017798	TTA	2	6	1258	1263	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_017798	TAA	2	6	1272	1277	66.67 %	33.33 %	0 %	0 %	Non-Coding
13	NC_017798	TAA	2	6	1306	1311	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_017798	ATG	2	6	1411	1416	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
15	NC_017798	ATT	2	6	1442	1447	33.33 %	66.67 %	0 %	0 %	Non-Coding
16	NC_017798	AAC	2	6	2348	2353	66.67 %	0 %	0 %	33.33 %	Non-Coding
17	NC_017798	TAA	2	6	2901	2906	66.67 %	33.33 %	0 %	0 %	Non-Coding
18	NC_017798	ATT	2	6	2919	2924	33.33 %	66.67 %	0 %	0 %	Non-Coding
19	NC_017798	CAA	2	6	2926	2931	66.67 %	0 %	0 %	33.33 %	Non-Coding
20	NC_017798	TTC	2	6	4069	4074	0 %	66.67 %	0 %	33.33 %	Non-Coding
21	NC_017798	CCT	2	6	4076	4081	0 %	33.33 %	0 %	66.67 %	Non-Coding
22	NC_017798	TTA	2	6	5374	5379	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_017798	TAA	2	6	5397	5402	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_017798	AAT	2	6	5428	5433	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_017798	TTA	2	6	5439	5444	33.33 %	66.67 %	0 %	0 %	Non-Coding
26	NC_017798	ACT	2	6	5471	5476	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
27	NC_017798	TAT	2	6	5527	5532	33.33 %	66.67 %	0 %	0 %	Non-Coding
28	NC_017798	TAA	2	6	5773	5778	66.67 %	33.33 %	0 %	0 %	Non-Coding
29	NC_017798	TAA	2	6	5782	5787	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_017798	AGA	2	6	5797	5802	66.67 %	0 %	33.33 %	0 %	Non-Coding
31	NC_017798	AAT	2	6	5811	5816	66.67 %	33.33 %	0 %	0 %	Non-Coding
32	NC_017798	CTT	2	6	5841	5846	0 %	66.67 %	0 %	33.33 %	Non-Coding
33	NC_017798	TAA	2	6	5854	5859	66.67 %	33.33 %	0 %	0 %	Non-Coding
34	NC_017798	CTG	2	6	5890	5895	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
35	NC_017798	CTT	2	6	5920	5925	0 %	66.67 %	0 %	33.33 %	Non-Coding
36	NC_017798	CAT	2	6	6880	6885	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
37	NC_017798	TCC	2	6	6910	6915	0 %	33.33 %	0 %	66.67 %	Non-Coding
38	NC_017798	TCC	2	6	6919	6924	0 %	33.33 %	0 %	66.67 %	Non-Coding
39	NC_017798	TCC	2	6	6928	6933	0 %	33.33 %	0 %	66.67 %	Non-Coding
40	NC_017798	CAT	2	6	6964	6969	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
41	NC_017798	CAT	3	9	6973	6981	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
42	NC_017798	TTC	2	6	7041	7046	0 %	66.67 %	0 %	33.33 %	Non-Coding
43	NC_017798	TCA	2	6	7053	7058	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
44	NC_017798	CTT	2	6	7083	7088	0 %	66.67 %	0 %	33.33 %	Non-Coding
45	NC_017798	CAA	2	6	7094	7099	66.67 %	0 %	0 %	33.33 %	Non-Coding
46	NC_017798	TTC	2	6	7119	7124	0 %	66.67 %	0 %	33.33 %	Non-Coding
47	NC_017798	TAA	2	6	7183	7188	66.67 %	33.33 %	0 %	0 %	Non-Coding
48	NC_017798	TAT	2	6	7257	7262	33.33 %	66.67 %	0 %	0 %	Non-Coding
49	NC_017798	TAA	2	6	7295	7300	66.67 %	33.33 %	0 %	0 %	Non-Coding
50	NC_017798	CTT	2	6	7400	7405	0 %	66.67 %	0 %	33.33 %	Non-Coding
51	NC_017798	TAT	2	6	7422	7427	33.33 %	66.67 %	0 %	0 %	Non-Coding
52	NC_017798	CAC	2	6	8440	8445	33.33 %	0 %	0 %	66.67 %	Non-Coding
53	NC_017798	CAT	2	6	8446	8451	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
54	NC_017798	TTC	2	6	8463	8468	0 %	66.67 %	0 %	33.33 %	Non-Coding
55	NC_017798	AGT	2	6	9768	9773	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
56	NC_017798	TAT	2	6	9791	9796	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_017798	TAA	2	6	9824	9829	66.67 %	33.33 %	0 %	0 %	Non-Coding
58	NC_017798	CAT	2	6	9896	9901	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
59	NC_017798	CTT	2	6	9911	9916	0 %	66.67 %	0 %	33.33 %	Non-Coding
60	NC_017798	AAG	2	6	10006	10011	66.67 %	0 %	33.33 %	0 %	Non-Coding
61	NC_017798	AAT	2	6	10014	10019	66.67 %	33.33 %	0 %	0 %	Non-Coding
62	NC_017798	ATT	2	6	10106	10111	33.33 %	66.67 %	0 %	0 %	Non-Coding
63	NC_017798	TAT	3	9	10127	10135	33.33 %	66.67 %	0 %	0 %	Non-Coding
64	NC_017798	TGT	2	6	10141	10146	0 %	66.67 %	33.33 %	0 %	Non-Coding
65	NC_017798	ATG	2	6	10301	10306	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
66	NC_017798	GAA	2	6	10348	10353	66.67 %	0 %	33.33 %	0 %	Non-Coding
67	NC_017798	TTA	2	6	10357	10362	33.33 %	66.67 %	0 %	0 %	Non-Coding
68	NC_017798	ATG	2	6	10520	10525	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
69	NC_017798	AAT	3	9	10540	10548	66.67 %	33.33 %	0 %	0 %	Non-Coding
70	NC_017798	ATT	2	6	10550	10555	33.33 %	66.67 %	0 %	0 %	Non-Coding
71	NC_017798	TAA	2	6	10614	10619	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_017798	TAC	2	6	10620	10625	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
73	NC_017798	AAT	2	6	10678	10683	66.67 %	33.33 %	0 %	0 %	Non-Coding
74	NC_017798	GAA	2	6	10705	10710	66.67 %	0 %	33.33 %	0 %	Non-Coding
75	NC_017798	AAT	2	6	10854	10859	66.67 %	33.33 %	0 %	0 %	Non-Coding
76	NC_017798	CAA	2	6	10912	10917	66.67 %	0 %	0 %	33.33 %	Non-Coding
77	NC_017798	ATG	2	6	10973	10978	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
78	NC_017798	AAC	2	6	10988	10993	66.67 %	0 %	0 %	33.33 %	Non-Coding
79	NC_017798	TAT	2	6	12777	12782	33.33 %	66.67 %	0 %	0 %	Non-Coding
80	NC_017798	AAG	2	6	12861	12866	66.67 %	0 %	33.33 %	0 %	Non-Coding
81	NC_017798	ACA	2	6	12884	12889	66.67 %	0 %	0 %	33.33 %	Non-Coding
82	NC_017798	GCT	2	6	12915	12920	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
83	NC_017798	TGA	2	6	12978	12983	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
84	NC_017798	AAT	2	6	13209	13214	66.67 %	33.33 %	0 %	0 %	Non-Coding
85	NC_017798	AAG	2	6	13252	13257	66.67 %	0 %	33.33 %	0 %	Non-Coding
86	NC_017798	AGT	2	6	13290	13295	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
87	NC_017798	TAT	2	6	13320	13325	33.33 %	66.67 %	0 %	0 %	Non-Coding
88	NC_017798	CAT	2	6	13333	13338	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
89	NC_017798	ATT	2	6	13340	13345	33.33 %	66.67 %	0 %	0 %	Non-Coding
90	NC_017798	ATT	2	6	13357	13362	33.33 %	66.67 %	0 %	0 %	Non-Coding
91	NC_017798	ACA	2	6	13428	13433	66.67 %	0 %	0 %	33.33 %	Non-Coding
92	NC_017798	TAC	2	6	13470	13475	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
93	NC_017798	TGC	2	6	13534	13539	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
94	NC_017798	CTT	2	6	13599	13604	0 %	66.67 %	0 %	33.33 %	Non-Coding
95	NC_017798	ATA	2	6	13695	13700	66.67 %	33.33 %	0 %	0 %	Non-Coding
96	NC_017798	TCA	2	6	13707	13712	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
97	NC_017798	TAC	2	6	13773	13778	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
98	NC_017798	AAG	2	6	13790	13795	66.67 %	0 %	33.33 %	0 %	Non-Coding
99	NC_017798	ATA	3	9	13909	13917	66.67 %	33.33 %	0 %	0 %	Non-Coding
100	NC_017798	ATA	2	6	13968	13973	66.67 %	33.33 %	0 %	0 %	Non-Coding
101	NC_017798	AGA	2	6	14055	14060	66.67 %	0 %	33.33 %	0 %	Non-Coding
102	NC_017798	TAT	2	6	14077	14082	33.33 %	66.67 %	0 %	0 %	Non-Coding
103	NC_017798	TTG	2	6	14083	14088	0 %	66.67 %	33.33 %	0 %	Non-Coding
104	NC_017798	ATT	2	6	14108	14113	33.33 %	66.67 %	0 %	0 %	Non-Coding
105	NC_017798	AAT	2	6	14351	14356	66.67 %	33.33 %	0 %	0 %	Non-Coding
106	NC_017798	TAT	2	6	14399	14404	33.33 %	66.67 %	0 %	0 %	Non-Coding
107	NC_017798	TTG	2	6	14423	14428	0 %	66.67 %	33.33 %	0 %	Non-Coding
108	NC_017798	TAT	2	6	14524	14529	33.33 %	66.67 %	0 %	0 %	Non-Coding
109	NC_017798	TAC	2	6	14935	14940	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
110	NC_017798	TAT	2	6	15002	15007	33.33 %	66.67 %	0 %	0 %	Non-Coding
111	NC_017798	CAA	2	6	15124	15129	66.67 %	0 %	0 %	33.33 %	Non-Coding
112	NC_017798	TAA	3	9	15223	15231	66.67 %	33.33 %	0 %	0 %	Non-Coding
113	NC_017798	AAC	2	6	15239	15244	66.67 %	0 %	0 %	33.33 %	Non-Coding
114	NC_017798	ACT	2	6	15321	15326	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
115	NC_017798	GAA	2	6	15431	15436	66.67 %	0 %	33.33 %	0 %	Non-Coding
116	NC_017798	CAA	2	6	15443	15448	66.67 %	0 %	0 %	33.33 %	Non-Coding
117	NC_017798	ATC	2	6	15462	15467	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
118	NC_017798	TAA	2	6	15481	15486	66.67 %	33.33 %	0 %	0 %	Non-Coding
119	NC_017798	TAA	3	9	15532	15540	66.67 %	33.33 %	0 %	0 %	Non-Coding
120	NC_017798	TAA	3	9	15544	15552	66.67 %	33.33 %	0 %	0 %	Non-Coding
121	NC_017798	AGA	3	9	15555	15563	66.67 %	0 %	33.33 %	0 %	Non-Coding
122	NC_017798	TTG	2	6	16225	16230	0 %	66.67 %	33.33 %	0 %	Non-Coding
123	NC_017798	TTA	2	6	17572	17577	33.33 %	66.67 %	0 %	0 %	Non-Coding
124	NC_017798	AGA	2	6	18141	18146	66.67 %	0 %	33.33 %	0 %	Non-Coding
125	NC_017798	ATT	2	6	18207	18212	33.33 %	66.67 %	0 %	0 %	Non-Coding
126	NC_017798	TAG	2	6	18215	18220	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
127	NC_017798	TAA	2	6	18347	18352	66.67 %	33.33 %	0 %	0 %	Non-Coding
128	NC_017798	TGT	2	6	18364	18369	0 %	66.67 %	33.33 %	0 %	Non-Coding
129	NC_017798	TAA	2	6	18376	18381	66.67 %	33.33 %	0 %	0 %	Non-Coding
130	NC_017798	TAA	3	9	18415	18423	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.