MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia crocidurae str. Achema plasmid unnamed

Total Repeats: 159

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017796	TCC	2	6	39	44	0 %	33.33 %	0 %	66.67 %	Non-Coding
2	NC_017796	CAA	2	6	99	104	66.67 %	0 %	0 %	33.33 %	Non-Coding
3	NC_017796	TCT	2	6	176	181	0 %	66.67 %	0 %	33.33 %	Non-Coding
4	NC_017796	AGA	2	6	292	297	66.67 %	0 %	33.33 %	0 %	Non-Coding
5	NC_017796	AAT	2	6	302	307	66.67 %	33.33 %	0 %	0 %	Non-Coding
6	NC_017796	TTA	2	6	320	325	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_017796	TCA	2	6	326	331	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8	NC_017796	TTA	3	9	344	352	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_017796	TCC	2	6	404	409	0 %	33.33 %	0 %	66.67 %	Non-Coding
10	NC_017796	CAT	2	6	456	461	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
11	NC_017796	TTA	2	6	498	503	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_017796	TTA	2	6	539	544	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_017796	TCT	2	6	551	556	0 %	66.67 %	0 %	33.33 %	Non-Coding
14	NC_017796	TCA	2	6	566	571	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
15	NC_017796	ATT	2	6	580	585	33.33 %	66.67 %	0 %	0 %	Non-Coding
16	NC_017796	ACA	2	6	587	592	66.67 %	0 %	0 %	33.33 %	Non-Coding
17	NC_017796	TAT	2	6	621	626	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_017796	AAT	2	6	629	634	66.67 %	33.33 %	0 %	0 %	Non-Coding
19	NC_017796	TAA	2	6	670	675	66.67 %	33.33 %	0 %	0 %	Non-Coding
20	NC_017796	CTT	2	6	707	712	0 %	66.67 %	0 %	33.33 %	Non-Coding
21	NC_017796	TAA	2	6	719	724	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_017796	ATT	2	6	881	886	33.33 %	66.67 %	0 %	0 %	Non-Coding
23	NC_017796	TTA	2	6	890	895	33.33 %	66.67 %	0 %	0 %	Non-Coding
24	NC_017796	ATT	2	6	945	950	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_017796	ACT	2	6	977	982	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
26	NC_017796	TAT	2	6	1006	1011	33.33 %	66.67 %	0 %	0 %	Non-Coding
27	NC_017796	TTA	2	6	1136	1141	33.33 %	66.67 %	0 %	0 %	Non-Coding
28	NC_017796	TTA	2	6	1374	1379	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_017796	ATA	2	6	1637	1642	66.67 %	33.33 %	0 %	0 %	Non-Coding
30	NC_017796	GAG	2	6	1689	1694	33.33 %	0 %	66.67 %	0 %	Non-Coding
31	NC_017796	CTA	2	6	3067	3072	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_017796	TTA	2	6	5030	5035	33.33 %	66.67 %	0 %	0 %	Non-Coding
33	NC_017796	ATA	2	6	5104	5109	66.67 %	33.33 %	0 %	0 %	Non-Coding
34	NC_017796	ATT	2	6	5221	5226	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_017796	ATT	2	6	5646	5651	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_017796	AAT	2	6	5683	5688	66.67 %	33.33 %	0 %	0 %	Non-Coding
37	NC_017796	CAG	2	6	5708	5713	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
38	NC_017796	TAC	2	6	5787	5792	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
39	NC_017796	CAG	2	6	5840	5845	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
40	NC_017796	TAG	2	6	5858	5863	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
41	NC_017796	TCA	3	9	6394	6402	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
42	NC_017796	ATT	2	6	6405	6410	33.33 %	66.67 %	0 %	0 %	Non-Coding
43	NC_017796	CTT	2	6	6478	6483	0 %	66.67 %	0 %	33.33 %	Non-Coding
44	NC_017796	CCT	2	6	6508	6513	0 %	33.33 %	0 %	66.67 %	Non-Coding
45	NC_017796	AGA	2	6	6562	6567	66.67 %	0 %	33.33 %	0 %	Non-Coding
46	NC_017796	AAT	2	6	6638	6643	66.67 %	33.33 %	0 %	0 %	Non-Coding
47	NC_017796	ATT	2	6	7867	7872	33.33 %	66.67 %	0 %	0 %	Non-Coding
48	NC_017796	TTC	2	6	8674	8679	0 %	66.67 %	0 %	33.33 %	Non-Coding
49	NC_017796	CTC	2	6	8944	8949	0 %	33.33 %	0 %	66.67 %	Non-Coding
50	NC_017796	TTC	2	6	9017	9022	0 %	66.67 %	0 %	33.33 %	Non-Coding
51	NC_017796	CTT	2	6	9098	9103	0 %	66.67 %	0 %	33.33 %	Non-Coding
52	NC_017796	AAT	2	6	9376	9381	66.67 %	33.33 %	0 %	0 %	Non-Coding
53	NC_017796	CTC	2	6	10371	10376	0 %	33.33 %	0 %	66.67 %	Non-Coding
54	NC_017796	CCT	3	9	10382	10390	0 %	33.33 %	0 %	66.67 %	Non-Coding
55	NC_017796	CTC	2	6	10407	10412	0 %	33.33 %	0 %	66.67 %	Non-Coding
56	NC_017796	CCT	2	6	10583	10588	0 %	33.33 %	0 %	66.67 %	Non-Coding
57	NC_017796	ACC	2	6	10743	10748	33.33 %	0 %	0 %	66.67 %	Non-Coding
58	NC_017796	CAT	2	6	10767	10772	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
59	NC_017796	CAT	2	6	10866	10871	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
60	NC_017796	ATT	2	6	10941	10946	33.33 %	66.67 %	0 %	0 %	Non-Coding
61	NC_017796	TGT	2	6	10952	10957	0 %	66.67 %	33.33 %	0 %	Non-Coding
62	NC_017796	TGA	2	6	10992	10997	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
63	NC_017796	AAC	2	6	11017	11022	66.67 %	0 %	0 %	33.33 %	Non-Coding
64	NC_017796	TAA	2	6	11040	11045	66.67 %	33.33 %	0 %	0 %	Non-Coding
65	NC_017796	TAT	2	6	11091	11096	33.33 %	66.67 %	0 %	0 %	Non-Coding
66	NC_017796	TAA	2	6	11151	11156	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_017796	ATT	2	6	11242	11247	33.33 %	66.67 %	0 %	0 %	Non-Coding
68	NC_017796	TAA	2	6	11276	11281	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_017796	TAC	2	6	11284	11289	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
70	NC_017796	AAT	3	9	11294	11302	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_017796	TAA	2	6	11519	11524	66.67 %	33.33 %	0 %	0 %	Non-Coding
72	NC_017796	AAC	2	6	11560	11565	66.67 %	0 %	0 %	33.33 %	Non-Coding
73	NC_017796	AAT	2	6	11575	11580	66.67 %	33.33 %	0 %	0 %	Non-Coding
74	NC_017796	TAC	2	6	11720	11725	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
75	NC_017796	CTA	2	6	11728	11733	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
76	NC_017796	TTC	2	6	12695	12700	0 %	66.67 %	0 %	33.33 %	Non-Coding
77	NC_017796	ATT	2	6	13368	13373	33.33 %	66.67 %	0 %	0 %	Non-Coding
78	NC_017796	TTC	2	6	13384	13389	0 %	66.67 %	0 %	33.33 %	Non-Coding
79	NC_017796	CTC	2	6	13412	13417	0 %	33.33 %	0 %	66.67 %	Non-Coding
80	NC_017796	TTC	2	6	13430	13435	0 %	66.67 %	0 %	33.33 %	Non-Coding
81	NC_017796	CTA	2	6	13462	13467	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
82	NC_017796	CCT	2	6	13492	13497	0 %	33.33 %	0 %	66.67 %	Non-Coding
83	NC_017796	TTA	2	6	13747	13752	33.33 %	66.67 %	0 %	0 %	Non-Coding
84	NC_017796	CCA	2	6	13959	13964	33.33 %	0 %	0 %	66.67 %	Non-Coding
85	NC_017796	CTC	2	6	14010	14015	0 %	33.33 %	0 %	66.67 %	Non-Coding
86	NC_017796	TAT	2	6	14019	14024	33.33 %	66.67 %	0 %	0 %	Non-Coding
87	NC_017796	CAT	2	6	14029	14034	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
88	NC_017796	ACT	2	6	14036	14041	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
89	NC_017796	ATT	2	6	14087	14092	33.33 %	66.67 %	0 %	0 %	Non-Coding
90	NC_017796	AGT	2	6	14117	14122	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
91	NC_017796	TTA	2	6	14195	14200	33.33 %	66.67 %	0 %	0 %	Non-Coding
92	NC_017796	CAT	2	6	15370	15375	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
93	NC_017796	ATT	2	6	15430	15435	33.33 %	66.67 %	0 %	0 %	Non-Coding
94	NC_017796	TTA	2	6	15475	15480	33.33 %	66.67 %	0 %	0 %	Non-Coding
95	NC_017796	ATT	2	6	15633	15638	33.33 %	66.67 %	0 %	0 %	Non-Coding
96	NC_017796	CCT	2	6	16396	16401	0 %	33.33 %	0 %	66.67 %	Non-Coding
97	NC_017796	CTC	2	6	18599	18604	0 %	33.33 %	0 %	66.67 %	Non-Coding
98	NC_017796	ATC	4	12	18625	18636	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
99	NC_017796	TTC	2	6	18661	18666	0 %	66.67 %	0 %	33.33 %	Non-Coding
100	NC_017796	CTT	2	6	18729	18734	0 %	66.67 %	0 %	33.33 %	Non-Coding
101	NC_017796	ATC	2	6	18753	18758	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
102	NC_017796	TAT	2	6	18915	18920	33.33 %	66.67 %	0 %	0 %	Non-Coding
103	NC_017796	CCT	2	6	19815	19820	0 %	33.33 %	0 %	66.67 %	Non-Coding
104	NC_017796	AGA	2	6	19871	19876	66.67 %	0 %	33.33 %	0 %	Non-Coding
105	NC_017796	TAC	2	6	19897	19902	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
106	NC_017796	TCT	2	6	19933	19938	0 %	66.67 %	0 %	33.33 %	Non-Coding
107	NC_017796	AAT	2	6	20044	20049	66.67 %	33.33 %	0 %	0 %	Non-Coding
108	NC_017796	AAC	2	6	20123	20128	66.67 %	0 %	0 %	33.33 %	Non-Coding
109	NC_017796	TAT	2	6	20168	20173	33.33 %	66.67 %	0 %	0 %	Non-Coding
110	NC_017796	ATT	2	6	20191	20196	33.33 %	66.67 %	0 %	0 %	Non-Coding
111	NC_017796	TAT	2	6	21374	21379	33.33 %	66.67 %	0 %	0 %	Non-Coding
112	NC_017796	ACA	2	6	21411	21416	66.67 %	0 %	0 %	33.33 %	Non-Coding
113	NC_017796	TAA	2	6	21444	21449	66.67 %	33.33 %	0 %	0 %	Non-Coding
114	NC_017796	TAA	2	6	22581	22586	66.67 %	33.33 %	0 %	0 %	Non-Coding
115	NC_017796	TTA	2	6	22635	22640	33.33 %	66.67 %	0 %	0 %	Non-Coding
116	NC_017796	TTC	2	6	22664	22669	0 %	66.67 %	0 %	33.33 %	Non-Coding
117	NC_017796	AAG	2	6	22685	22690	66.67 %	0 %	33.33 %	0 %	Non-Coding
118	NC_017796	ATA	5	15	22695	22709	66.67 %	33.33 %	0 %	0 %	Non-Coding
119	NC_017796	ATT	2	6	22735	22740	33.33 %	66.67 %	0 %	0 %	Non-Coding
120	NC_017796	ACT	2	6	22858	22863	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
121	NC_017796	ATA	2	6	22986	22991	66.67 %	33.33 %	0 %	0 %	Non-Coding
122	NC_017796	TAA	2	6	22999	23004	66.67 %	33.33 %	0 %	0 %	Non-Coding
123	NC_017796	TAA	2	6	23023	23028	66.67 %	33.33 %	0 %	0 %	Non-Coding
124	NC_017796	TAT	2	6	23207	23212	33.33 %	66.67 %	0 %	0 %	Non-Coding
125	NC_017796	AAT	2	6	23216	23221	66.67 %	33.33 %	0 %	0 %	Non-Coding
126	NC_017796	ATT	2	6	23243	23248	33.33 %	66.67 %	0 %	0 %	Non-Coding
127	NC_017796	GTT	2	6	23309	23314	0 %	66.67 %	33.33 %	0 %	Non-Coding
128	NC_017796	AGT	2	6	25291	25296	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
129	NC_017796	AAC	2	6	25305	25310	66.67 %	0 %	0 %	33.33 %	Non-Coding
130	NC_017796	TAA	2	6	25339	25344	66.67 %	33.33 %	0 %	0 %	Non-Coding
131	NC_017796	ATA	4	12	25348	25359	66.67 %	33.33 %	0 %	0 %	Non-Coding
132	NC_017796	TTA	2	6	25376	25381	33.33 %	66.67 %	0 %	0 %	Non-Coding
133	NC_017796	ATT	2	6	25552	25557	33.33 %	66.67 %	0 %	0 %	Non-Coding
134	NC_017796	ATT	2	6	25852	25857	33.33 %	66.67 %	0 %	0 %	Non-Coding
135	NC_017796	ATA	2	6	25860	25865	66.67 %	33.33 %	0 %	0 %	Non-Coding
136	NC_017796	TAA	2	6	25903	25908	66.67 %	33.33 %	0 %	0 %	Non-Coding
137	NC_017796	TTA	2	6	25944	25949	33.33 %	66.67 %	0 %	0 %	Non-Coding
138	NC_017796	GTT	2	6	26033	26038	0 %	66.67 %	33.33 %	0 %	Non-Coding
139	NC_017796	TAT	2	6	26069	26074	33.33 %	66.67 %	0 %	0 %	Non-Coding
140	NC_017796	ACA	2	6	26883	26888	66.67 %	0 %	0 %	33.33 %	Non-Coding
141	NC_017796	TGA	2	6	26894	26899	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
142	NC_017796	ATA	2	6	26913	26918	66.67 %	33.33 %	0 %	0 %	Non-Coding
143	NC_017796	ATA	2	6	26927	26932	66.67 %	33.33 %	0 %	0 %	Non-Coding
144	NC_017796	ATC	2	6	26948	26953	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
145	NC_017796	TTA	2	6	26970	26975	33.33 %	66.67 %	0 %	0 %	Non-Coding
146	NC_017796	TAA	2	6	26991	26996	66.67 %	33.33 %	0 %	0 %	Non-Coding
147	NC_017796	ATT	2	6	27133	27138	33.33 %	66.67 %	0 %	0 %	Non-Coding
148	NC_017796	TTA	2	6	27163	27168	33.33 %	66.67 %	0 %	0 %	Non-Coding
149	NC_017796	TTG	2	6	27189	27194	0 %	66.67 %	33.33 %	0 %	Non-Coding
150	NC_017796	ATG	2	6	27271	27276	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
151	NC_017796	ATA	2	6	27277	27282	66.67 %	33.33 %	0 %	0 %	Non-Coding
152	NC_017796	TGA	2	6	27284	27289	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
153	NC_017796	AAC	2	6	27295	27300	66.67 %	0 %	0 %	33.33 %	Non-Coding
154	NC_017796	ACA	2	6	27345	27350	66.67 %	0 %	0 %	33.33 %	Non-Coding
155	NC_017796	AAT	2	6	27356	27361	66.67 %	33.33 %	0 %	0 %	Non-Coding
156	NC_017796	AGT	2	6	27532	27537	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
157	NC_017796	ACA	2	6	27542	27547	66.67 %	0 %	0 %	33.33 %	Non-Coding
158	NC_017796	TCA	2	6	27572	27577	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
159	NC_017796	ATA	2	6	27697	27702	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.