MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia crocidurae str. Achema plasmid unnamed

Total Repeats: 98

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017794	TCT	2	6	22	27	0 %	66.67 %	0 %	33.33 %	Non-Coding
2	NC_017794	ATA	2	6	134	139	66.67 %	33.33 %	0 %	0 %	Non-Coding
3	NC_017794	TCC	2	6	500	505	0 %	33.33 %	0 %	66.67 %	Non-Coding
4	NC_017794	TTA	2	6	865	870	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_017794	CTT	2	6	1945	1950	0 %	66.67 %	0 %	33.33 %	Non-Coding
6	NC_017794	TCT	2	6	1974	1979	0 %	66.67 %	0 %	33.33 %	Non-Coding
7	NC_017794	TAA	2	6	2020	2025	66.67 %	33.33 %	0 %	0 %	Non-Coding
8	NC_017794	TAA	2	6	2424	2429	66.67 %	33.33 %	0 %	0 %	Non-Coding
9	NC_017794	CAA	2	6	2517	2522	66.67 %	0 %	0 %	33.33 %	Non-Coding
10	NC_017794	CTT	2	6	2725	2730	0 %	66.67 %	0 %	33.33 %	Non-Coding
11	NC_017794	CCT	2	6	2755	2760	0 %	33.33 %	0 %	66.67 %	Non-Coding
12	NC_017794	CAA	2	6	3011	3016	66.67 %	0 %	0 %	33.33 %	Non-Coding
13	NC_017794	TAC	2	6	3132	3137	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
14	NC_017794	TTC	2	6	3493	3498	0 %	66.67 %	0 %	33.33 %	Non-Coding
15	NC_017794	CTT	3	9	3546	3554	0 %	66.67 %	0 %	33.33 %	Non-Coding
16	NC_017794	ATT	2	6	3568	3573	33.33 %	66.67 %	0 %	0 %	Non-Coding
17	NC_017794	ATT	2	6	3616	3621	33.33 %	66.67 %	0 %	0 %	Non-Coding
18	NC_017794	CAT	2	6	3678	3683	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
19	NC_017794	CTG	2	6	3766	3771	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
20	NC_017794	CTT	2	6	3804	3809	0 %	66.67 %	0 %	33.33 %	Non-Coding
21	NC_017794	TCC	2	6	3854	3859	0 %	33.33 %	0 %	66.67 %	Non-Coding
22	NC_017794	TAA	2	6	3868	3873	66.67 %	33.33 %	0 %	0 %	Non-Coding
23	NC_017794	CTG	2	6	4087	4092	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
24	NC_017794	CTT	2	6	4125	4130	0 %	66.67 %	0 %	33.33 %	Non-Coding
25	NC_017794	TCC	2	6	4175	4180	0 %	33.33 %	0 %	66.67 %	Non-Coding
26	NC_017794	TAA	2	6	4189	4194	66.67 %	33.33 %	0 %	0 %	Non-Coding
27	NC_017794	TCA	3	9	4235	4243	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
28	NC_017794	TTA	2	6	4244	4249	33.33 %	66.67 %	0 %	0 %	Non-Coding
29	NC_017794	CTT	2	6	5130	5135	0 %	66.67 %	0 %	33.33 %	Non-Coding
30	NC_017794	TCT	2	6	5204	5209	0 %	66.67 %	0 %	33.33 %	Non-Coding
31	NC_017794	CTC	2	6	5210	5215	0 %	33.33 %	0 %	66.67 %	Non-Coding
32	NC_017794	CTT	2	6	5223	5228	0 %	66.67 %	0 %	33.33 %	Non-Coding
33	NC_017794	TAT	2	6	5231	5236	33.33 %	66.67 %	0 %	0 %	Non-Coding
34	NC_017794	TTA	2	6	5319	5324	33.33 %	66.67 %	0 %	0 %	Non-Coding
35	NC_017794	ATC	2	6	5359	5364	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
36	NC_017794	ATC	2	6	5392	5397	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
37	NC_017794	AAC	2	6	5541	5546	66.67 %	0 %	0 %	33.33 %	Non-Coding
38	NC_017794	TTA	2	6	5590	5595	33.33 %	66.67 %	0 %	0 %	Non-Coding
39	NC_017794	CCT	2	6	6773	6778	0 %	33.33 %	0 %	66.67 %	Non-Coding
40	NC_017794	AAT	2	6	6870	6875	66.67 %	33.33 %	0 %	0 %	Non-Coding
41	NC_017794	CCT	2	6	8096	8101	0 %	33.33 %	0 %	66.67 %	Non-Coding
42	NC_017794	TAA	2	6	8251	8256	66.67 %	33.33 %	0 %	0 %	Non-Coding
43	NC_017794	TTA	2	6	8257	8262	33.33 %	66.67 %	0 %	0 %	Non-Coding
44	NC_017794	TCC	3	9	9297	9305	0 %	33.33 %	0 %	66.67 %	Non-Coding
45	NC_017794	TCC	2	6	9315	9320	0 %	33.33 %	0 %	66.67 %	Non-Coding
46	NC_017794	CCT	2	6	9472	9477	0 %	33.33 %	0 %	66.67 %	Non-Coding
47	NC_017794	ACA	2	6	9579	9584	66.67 %	0 %	0 %	33.33 %	Non-Coding
48	NC_017794	CTT	2	6	9658	9663	0 %	66.67 %	0 %	33.33 %	Non-Coding
49	NC_017794	CTA	2	6	9668	9673	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
50	NC_017794	TGA	2	6	9679	9684	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
51	NC_017794	TTC	2	6	10264	10269	0 %	66.67 %	0 %	33.33 %	Non-Coding
52	NC_017794	CAA	2	6	10405	10410	66.67 %	0 %	0 %	33.33 %	Non-Coding
53	NC_017794	ATA	2	6	10475	10480	66.67 %	33.33 %	0 %	0 %	Non-Coding
54	NC_017794	CTA	2	6	10537	10542	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
55	NC_017794	AAT	2	6	10666	10671	66.67 %	33.33 %	0 %	0 %	Non-Coding
56	NC_017794	CAA	3	9	10680	10688	66.67 %	0 %	0 %	33.33 %	Non-Coding
57	NC_017794	ATA	2	6	10768	10773	66.67 %	33.33 %	0 %	0 %	Non-Coding
58	NC_017794	CTT	2	6	10791	10796	0 %	66.67 %	0 %	33.33 %	Non-Coding
59	NC_017794	AGA	2	6	10817	10822	66.67 %	0 %	33.33 %	0 %	Non-Coding
60	NC_017794	GTA	2	6	10957	10962	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
61	NC_017794	TAC	2	6	10973	10978	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
62	NC_017794	TAA	2	6	11047	11052	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_017794	AAT	2	6	11130	11135	66.67 %	33.33 %	0 %	0 %	Non-Coding
64	NC_017794	TCC	2	6	11160	11165	0 %	33.33 %	0 %	66.67 %	Non-Coding
65	NC_017794	TAA	2	6	11225	11230	66.67 %	33.33 %	0 %	0 %	Non-Coding
66	NC_017794	TAA	2	6	11283	11288	66.67 %	33.33 %	0 %	0 %	Non-Coding
67	NC_017794	AGT	2	6	11364	11369	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
68	NC_017794	TAA	3	9	11459	11467	66.67 %	33.33 %	0 %	0 %	Non-Coding
69	NC_017794	ATT	2	6	11510	11515	33.33 %	66.67 %	0 %	0 %	Non-Coding
70	NC_017794	AAT	2	6	11527	11532	66.67 %	33.33 %	0 %	0 %	Non-Coding
71	NC_017794	TTG	2	6	11567	11572	0 %	66.67 %	33.33 %	0 %	Non-Coding
72	NC_017794	TAT	2	6	11609	11614	33.33 %	66.67 %	0 %	0 %	Non-Coding
73	NC_017794	TAT	2	6	12223	12228	33.33 %	66.67 %	0 %	0 %	Non-Coding
74	NC_017794	TTA	2	6	14695	14700	33.33 %	66.67 %	0 %	0 %	Non-Coding
75	NC_017794	AAT	2	6	14727	14732	66.67 %	33.33 %	0 %	0 %	Non-Coding
76	NC_017794	TAA	2	6	14758	14763	66.67 %	33.33 %	0 %	0 %	Non-Coding
77	NC_017794	AAT	2	6	14776	14781	66.67 %	33.33 %	0 %	0 %	Non-Coding
78	NC_017794	TTG	2	6	14795	14800	0 %	66.67 %	33.33 %	0 %	Non-Coding
79	NC_017794	GAG	2	6	14845	14850	33.33 %	0 %	66.67 %	0 %	Non-Coding
80	NC_017794	ATA	2	6	15145	15150	66.67 %	33.33 %	0 %	0 %	Non-Coding
81	NC_017794	AAT	2	6	15183	15188	66.67 %	33.33 %	0 %	0 %	Non-Coding
82	NC_017794	ATA	2	6	15201	15206	66.67 %	33.33 %	0 %	0 %	Non-Coding
83	NC_017794	AGA	2	6	15220	15225	66.67 %	0 %	33.33 %	0 %	Non-Coding
84	NC_017794	ATA	2	6	15263	15268	66.67 %	33.33 %	0 %	0 %	Non-Coding
85	NC_017794	TGA	2	6	15294	15299	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
86	NC_017794	AAT	2	6	15396	15401	66.67 %	33.33 %	0 %	0 %	Non-Coding
87	NC_017794	TAA	2	6	15434	15439	66.67 %	33.33 %	0 %	0 %	Non-Coding
88	NC_017794	TAA	2	6	15457	15462	66.67 %	33.33 %	0 %	0 %	Non-Coding
89	NC_017794	TGT	2	6	15488	15493	0 %	66.67 %	33.33 %	0 %	Non-Coding
90	NC_017794	AAT	2	6	15529	15534	66.67 %	33.33 %	0 %	0 %	Non-Coding
91	NC_017794	ATT	2	6	15810	15815	33.33 %	66.67 %	0 %	0 %	Non-Coding
92	NC_017794	ATA	2	6	15865	15870	66.67 %	33.33 %	0 %	0 %	Non-Coding
93	NC_017794	AGG	2	6	16028	16033	33.33 %	0 %	66.67 %	0 %	Non-Coding
94	NC_017794	ATG	2	6	16320	16325	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
95	NC_017794	AAT	2	6	17358	17363	66.67 %	33.33 %	0 %	0 %	Non-Coding
96	NC_017794	TTA	2	6	17416	17421	33.33 %	66.67 %	0 %	0 %	Non-Coding
97	NC_017794	AGG	2	6	17488	17493	33.33 %	0 %	66.67 %	0 %	Non-Coding
98	NC_017794	AGA	2	6	17496	17501	66.67 %	0 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.