MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Repeats of Rahnella aquatilis HX2 plasmid PRA2

Total Repeats: 17

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017773	CATTTG	2	12	5787	5798	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
2	NC_017773	CAATAT	2	12	7905	7916	50 %	33.33 %	0 %	16.67 %	386845006
3	NC_017773	CTTACA	2	12	13578	13589	33.33 %	33.33 %	0 %	33.33 %	386845012
4	NC_017773	CGCCGG	2	12	15830	15841	0 %	0 %	50 %	50 %	386845014
5	NC_017773	CCGGTA	2	12	24520	24531	16.67 %	16.67 %	33.33 %	33.33 %	386845020
6	NC_017773	GACATG	2	12	29890	29901	33.33 %	16.67 %	33.33 %	16.67 %	386845026
7	NC_017773	CGCCAA	2	12	30509	30520	33.33 %	0 %	16.67 %	50 %	386845027
8	NC_017773	GACCGA	2	12	40824	40835	33.33 %	0 %	33.33 %	33.33 %	386845039
9	NC_017773	GCCCTT	2	12	49928	49939	0 %	33.33 %	16.67 %	50 %	386845046
10	NC_017773	ATTGGC	2	12	53314	53325	16.67 %	33.33 %	33.33 %	16.67 %	Non-Coding
11	NC_017773	ATACCA	2	12	54393	54404	50 %	16.67 %	0 %	33.33 %	386845048
12	NC_017773	TCAAGC	2	12	57254	57265	33.33 %	16.67 %	16.67 %	33.33 %	386845052
13	NC_017773	CTTTAC	2	12	62662	62673	16.67 %	50 %	0 %	33.33 %	386845059
14	NC_017773	GCGGGA	2	12	65701	65712	16.67 %	0 %	66.67 %	16.67 %	Non-Coding
15	NC_017773	GTTAAC	2	12	68062	68073	33.33 %	33.33 %	16.67 %	16.67 %	Non-Coding
16	NC_017773	TGAATG	2	12	71226	71237	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
17	NC_017773	AAAAAT	2	12	71959	71970	83.33 %	16.67 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.