Tetra-nucleotide Non-Coding Repeats of Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 plasmid pSLT_SL1344
Total Repeats: 76
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017720 | AAAG | 2 | 8 | 9548 | 9555 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
2 | NC_017720 | AATT | 2 | 8 | 9575 | 9582 | 50 % | 50 % | 0 % | 0 % | Non-Coding |
3 | NC_017720 | AATA | 2 | 8 | 9585 | 9592 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
4 | NC_017720 | ATTT | 2 | 8 | 9795 | 9802 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
5 | NC_017720 | ATTT | 2 | 8 | 9826 | 9833 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
6 | NC_017720 | TTTC | 2 | 8 | 9836 | 9843 | 0 % | 75 % | 0 % | 25 % | Non-Coding |
7 | NC_017720 | GTCA | 2 | 8 | 9872 | 9879 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
8 | NC_017720 | TTTA | 2 | 8 | 10653 | 10660 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
9 | NC_017720 | TCCT | 2 | 8 | 19658 | 19665 | 0 % | 50 % | 0 % | 50 % | Non-Coding |
10 | NC_017720 | ACAG | 2 | 8 | 25316 | 25323 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
11 | NC_017720 | ATTC | 2 | 8 | 25589 | 25596 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
12 | NC_017720 | CAGG | 2 | 8 | 26413 | 26420 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
13 | NC_017720 | GCCG | 2 | 8 | 26436 | 26443 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
14 | NC_017720 | CTGA | 2 | 8 | 26461 | 26468 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
15 | NC_017720 | TTTA | 2 | 8 | 32430 | 32437 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
16 | NC_017720 | ACTG | 2 | 8 | 33835 | 33842 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
17 | NC_017720 | CAGT | 2 | 8 | 34296 | 34303 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
18 | NC_017720 | GGCA | 2 | 8 | 34657 | 34664 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
19 | NC_017720 | AATG | 2 | 8 | 41171 | 41178 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
20 | NC_017720 | TGAT | 2 | 8 | 42944 | 42951 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
21 | NC_017720 | CCCG | 2 | 8 | 42954 | 42961 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
22 | NC_017720 | CCGG | 2 | 8 | 44602 | 44609 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
23 | NC_017720 | ATTC | 2 | 8 | 44692 | 44699 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
24 | NC_017720 | AAAT | 2 | 8 | 50078 | 50085 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
25 | NC_017720 | GCAA | 2 | 8 | 50310 | 50317 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
26 | NC_017720 | GCCA | 2 | 8 | 51449 | 51456 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
27 | NC_017720 | CCGG | 2 | 8 | 51609 | 51616 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
28 | NC_017720 | GCCA | 2 | 8 | 51853 | 51860 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
29 | NC_017720 | CCTG | 2 | 8 | 51908 | 51915 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
30 | NC_017720 | GCCA | 2 | 8 | 52189 | 52196 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
31 | NC_017720 | CCAG | 2 | 8 | 52405 | 52412 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
32 | NC_017720 | CAAA | 2 | 8 | 54211 | 54218 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
33 | NC_017720 | ACTA | 2 | 8 | 54230 | 54237 | 50 % | 25 % | 0 % | 25 % | Non-Coding |
34 | NC_017720 | ACAA | 2 | 8 | 54238 | 54245 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
35 | NC_017720 | CGGG | 2 | 8 | 54329 | 54336 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
36 | NC_017720 | AGAC | 2 | 8 | 54421 | 54428 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
37 | NC_017720 | AAAT | 2 | 8 | 54974 | 54981 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
38 | NC_017720 | TTCG | 2 | 8 | 61063 | 61070 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
39 | NC_017720 | GAAT | 2 | 8 | 62658 | 62665 | 50 % | 25 % | 25 % | 0 % | Non-Coding |
40 | NC_017720 | ATAA | 2 | 8 | 62811 | 62818 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
41 | NC_017720 | GCGG | 2 | 8 | 67647 | 67654 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
42 | NC_017720 | CTTA | 2 | 8 | 68058 | 68065 | 25 % | 50 % | 0 % | 25 % | Non-Coding |
43 | NC_017720 | CAGG | 2 | 8 | 69838 | 69845 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
44 | NC_017720 | CTGC | 2 | 8 | 70388 | 70395 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
45 | NC_017720 | CGGG | 2 | 8 | 70428 | 70435 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
46 | NC_017720 | TCAC | 2 | 8 | 70474 | 70481 | 25 % | 25 % | 0 % | 50 % | Non-Coding |
47 | NC_017720 | CCCG | 2 | 8 | 70485 | 70492 | 0 % | 0 % | 25 % | 75 % | Non-Coding |
48 | NC_017720 | CGGG | 2 | 8 | 70524 | 70531 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
49 | NC_017720 | CTGC | 2 | 8 | 70806 | 70813 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
50 | NC_017720 | GGCT | 2 | 8 | 70885 | 70892 | 0 % | 25 % | 50 % | 25 % | Non-Coding |
51 | NC_017720 | ACTG | 2 | 8 | 75111 | 75118 | 25 % | 25 % | 25 % | 25 % | Non-Coding |
52 | NC_017720 | CTGT | 2 | 8 | 75129 | 75136 | 0 % | 50 % | 25 % | 25 % | Non-Coding |
53 | NC_017720 | AAAT | 2 | 8 | 75222 | 75229 | 75 % | 25 % | 0 % | 0 % | Non-Coding |
54 | NC_017720 | GTGA | 2 | 8 | 77447 | 77454 | 25 % | 25 % | 50 % | 0 % | Non-Coding |
55 | NC_017720 | CTGC | 2 | 8 | 77721 | 77728 | 0 % | 25 % | 25 % | 50 % | Non-Coding |
56 | NC_017720 | TGGG | 2 | 8 | 78331 | 78338 | 0 % | 25 % | 75 % | 0 % | Non-Coding |
57 | NC_017720 | GCAA | 2 | 8 | 78404 | 78411 | 50 % | 0 % | 25 % | 25 % | Non-Coding |
58 | NC_017720 | GAAA | 2 | 8 | 78415 | 78422 | 75 % | 0 % | 25 % | 0 % | Non-Coding |
59 | NC_017720 | TATT | 2 | 8 | 78879 | 78886 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
60 | NC_017720 | TATG | 2 | 8 | 78980 | 78987 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
61 | NC_017720 | ATTT | 2 | 8 | 79039 | 79046 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
62 | NC_017720 | AAAC | 2 | 8 | 79088 | 79095 | 75 % | 0 % | 0 % | 25 % | Non-Coding |
63 | NC_017720 | GTTT | 2 | 8 | 79121 | 79128 | 0 % | 75 % | 25 % | 0 % | Non-Coding |
64 | NC_017720 | GGAA | 2 | 8 | 79666 | 79673 | 50 % | 0 % | 50 % | 0 % | Non-Coding |
65 | NC_017720 | GCCA | 2 | 8 | 79678 | 79685 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
66 | NC_017720 | TTTA | 2 | 8 | 80300 | 80307 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
67 | NC_017720 | AGGC | 2 | 8 | 85321 | 85328 | 25 % | 0 % | 50 % | 25 % | Non-Coding |
68 | NC_017720 | TTAG | 2 | 8 | 85570 | 85577 | 25 % | 50 % | 25 % | 0 % | Non-Coding |
69 | NC_017720 | TTTA | 2 | 8 | 85695 | 85702 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
70 | NC_017720 | ATTT | 2 | 8 | 86308 | 86315 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
71 | NC_017720 | CCGG | 2 | 8 | 89046 | 89053 | 0 % | 0 % | 50 % | 50 % | Non-Coding |
72 | NC_017720 | GGGA | 2 | 8 | 89096 | 89103 | 25 % | 0 % | 75 % | 0 % | Non-Coding |
73 | NC_017720 | GGGC | 2 | 8 | 90678 | 90685 | 0 % | 0 % | 75 % | 25 % | Non-Coding |
74 | NC_017720 | TTAT | 3 | 12 | 90725 | 90736 | 25 % | 75 % | 0 % | 0 % | Non-Coding |
75 | NC_017720 | GCCA | 2 | 8 | 92156 | 92163 | 25 % | 0 % | 25 % | 50 % | Non-Coding |
76 | NC_017720 | ACTT | 2 | 8 | 92554 | 92561 | 25 % | 50 % | 0 % | 25 % | Non-Coding |