Hexa-nucleotide Repeats of Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 plasmid pCol1B9_SL1344
Total Repeats: 22
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017718 | GTGAAA | 2 | 12 | 1158 | 1169 | 50 % | 16.67 % | 33.33 % | 0 % | 386730551 |
2 | NC_017718 | CGATCC | 2 | 12 | 4156 | 4167 | 16.67 % | 16.67 % | 16.67 % | 50 % | 386730555 |
3 | NC_017718 | TGAGAA | 2 | 12 | 4537 | 4548 | 50 % | 16.67 % | 33.33 % | 0 % | Non-Coding |
4 | NC_017718 | ATGCTC | 2 | 12 | 7603 | 7614 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 386730560 |
5 | NC_017718 | TGCTGA | 2 | 12 | 8791 | 8802 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 386730561 |
6 | NC_017718 | CAATAA | 2 | 12 | 10608 | 10619 | 66.67 % | 16.67 % | 0 % | 16.67 % | Non-Coding |
7 | NC_017718 | CTGGAA | 2 | 12 | 19682 | 19693 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 386730573 |
8 | NC_017718 | GGCGCT | 2 | 12 | 24720 | 24731 | 0 % | 16.67 % | 50 % | 33.33 % | 386730580 |
9 | NC_017718 | CAGGTG | 2 | 12 | 24751 | 24762 | 16.67 % | 16.67 % | 50 % | 16.67 % | 386730580 |
10 | NC_017718 | GTGGCG | 2 | 12 | 24841 | 24852 | 0 % | 16.67 % | 66.67 % | 16.67 % | 386730580 |
11 | NC_017718 | GCCGGA | 2 | 12 | 25092 | 25103 | 16.67 % | 0 % | 50 % | 33.33 % | 386730580 |
12 | NC_017718 | GGCTGT | 2 | 12 | 26630 | 26641 | 0 % | 33.33 % | 50 % | 16.67 % | 386730582 |
13 | NC_017718 | GGATGA | 2 | 12 | 34043 | 34054 | 33.33 % | 16.67 % | 50 % | 0 % | 386730592 |
14 | NC_017718 | GATATC | 2 | 12 | 38224 | 38235 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 386730594 |
15 | NC_017718 | ACCGGT | 2 | 12 | 50518 | 50529 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 386730605 |
16 | NC_017718 | CTTTTC | 2 | 12 | 52941 | 52952 | 0 % | 66.67 % | 0 % | 33.33 % | 386730606 |
17 | NC_017718 | TTCCGG | 2 | 12 | 53133 | 53144 | 0 % | 33.33 % | 33.33 % | 33.33 % | 386730606 |
18 | NC_017718 | AGTGTC | 2 | 12 | 59247 | 59258 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 386730615 |
19 | NC_017718 | CGGCAA | 2 | 12 | 61360 | 61371 | 33.33 % | 0 % | 33.33 % | 33.33 % | 386730615 |
20 | NC_017718 | GGAAAA | 2 | 12 | 66432 | 66443 | 66.67 % | 0 % | 33.33 % | 0 % | 386730621 |
21 | NC_017718 | TTTTGT | 2 | 12 | 82891 | 82902 | 0 % | 83.33 % | 16.67 % | 0 % | Non-Coding |
22 | NC_017718 | GTTTAT | 2 | 12 | 85839 | 85850 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |