Hexa-nucleotide Repeats of Escherichia coli W plasmid pRK1
Total Repeats: 35
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017665 | GATATC | 2 | 12 | 10065 | 10076 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 386707634 |
2 | NC_017665 | TATCAA | 2 | 12 | 16308 | 16319 | 50 % | 33.33 % | 0 % | 16.67 % | 386707641 |
3 | NC_017665 | ACCGGT | 2 | 12 | 22656 | 22667 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 386707646 |
4 | NC_017665 | CTTTTC | 2 | 12 | 25079 | 25090 | 0 % | 66.67 % | 0 % | 33.33 % | 386707647 |
5 | NC_017665 | TTCCGG | 2 | 12 | 25271 | 25282 | 0 % | 33.33 % | 33.33 % | 33.33 % | 386707647 |
6 | NC_017665 | AGTGTC | 2 | 12 | 31385 | 31396 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 386707656 |
7 | NC_017665 | CGGCAA | 2 | 12 | 33498 | 33509 | 33.33 % | 0 % | 33.33 % | 33.33 % | 386707656 |
8 | NC_017665 | TTCGTC | 2 | 12 | 45547 | 45558 | 0 % | 50 % | 16.67 % | 33.33 % | 386707670 |
9 | NC_017665 | CGTAGT | 2 | 12 | 49213 | 49224 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 386707673 |
10 | NC_017665 | GTTTAT | 2 | 12 | 55275 | 55286 | 16.67 % | 66.67 % | 16.67 % | 0 % | Non-Coding |
11 | NC_017665 | GTGAAA | 2 | 12 | 57501 | 57512 | 50 % | 16.67 % | 33.33 % | 0 % | 386707681 |
12 | NC_017665 | GGATGG | 2 | 12 | 58551 | 58562 | 16.67 % | 16.67 % | 66.67 % | 0 % | Non-Coding |
13 | NC_017665 | ATAGAT | 3 | 18 | 59548 | 59565 | 50 % | 33.33 % | 16.67 % | 0 % | 386707684 |
14 | NC_017665 | AGTACA | 2 | 12 | 59693 | 59704 | 50 % | 16.67 % | 16.67 % | 16.67 % | Non-Coding |
15 | NC_017665 | ATGCTC | 2 | 12 | 62582 | 62593 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 386707688 |
16 | NC_017665 | TGCTGA | 2 | 12 | 63769 | 63780 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | Non-Coding |
17 | NC_017665 | AGCCGC | 2 | 12 | 65761 | 65772 | 16.67 % | 0 % | 33.33 % | 50 % | Non-Coding |
18 | NC_017665 | TGTTTT | 2 | 12 | 66200 | 66211 | 0 % | 83.33 % | 16.67 % | 0 % | Non-Coding |
19 | NC_017665 | TGACAC | 2 | 12 | 68158 | 68169 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 386707692 |
20 | NC_017665 | TACGGT | 2 | 12 | 68415 | 68426 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 386707692 |
21 | NC_017665 | CGGTGG | 2 | 12 | 69301 | 69312 | 0 % | 16.67 % | 66.67 % | 16.67 % | 386707692 |
22 | NC_017665 | ACGGAA | 2 | 12 | 70307 | 70318 | 50 % | 0 % | 33.33 % | 16.67 % | 386707693 |
23 | NC_017665 | ATGGGA | 2 | 12 | 71418 | 71429 | 33.33 % | 16.67 % | 50 % | 0 % | 386707695 |
24 | NC_017665 | TTACTG | 2 | 12 | 71501 | 71512 | 16.67 % | 50 % | 16.67 % | 16.67 % | 386707695 |
25 | NC_017665 | AGTGAA | 2 | 12 | 71715 | 71726 | 50 % | 16.67 % | 33.33 % | 0 % | 386707695 |
26 | NC_017665 | ATTTTG | 2 | 12 | 73557 | 73568 | 16.67 % | 66.67 % | 16.67 % | 0 % | 386707697 |
27 | NC_017665 | GTTGTG | 2 | 12 | 81615 | 81626 | 0 % | 50 % | 50 % | 0 % | Non-Coding |
28 | NC_017665 | CCGTAG | 2 | 12 | 81922 | 81933 | 16.67 % | 16.67 % | 33.33 % | 33.33 % | 386707707 |
29 | NC_017665 | AACAGC | 2 | 12 | 86111 | 86122 | 50 % | 0 % | 16.67 % | 33.33 % | 386707713 |
30 | NC_017665 | AGCCTC | 2 | 12 | 96701 | 96712 | 16.67 % | 16.67 % | 16.67 % | 50 % | 386707726 |
31 | NC_017665 | GGCGCT | 2 | 12 | 97707 | 97718 | 0 % | 16.67 % | 50 % | 33.33 % | 386707728 |
32 | NC_017665 | CAGGTG | 2 | 12 | 97738 | 97749 | 16.67 % | 16.67 % | 50 % | 16.67 % | 386707728 |
33 | NC_017665 | GTGGCG | 2 | 12 | 97828 | 97839 | 0 % | 16.67 % | 66.67 % | 16.67 % | 386707728 |
34 | NC_017665 | GCCGGA | 2 | 12 | 98079 | 98090 | 16.67 % | 0 % | 50 % | 33.33 % | 386707728 |
35 | NC_017665 | GGCTGT | 2 | 12 | 99617 | 99628 | 0 % | 33.33 % | 50 % | 16.67 % | 386707730 |