Tri-nucleotide Repeats of Escherichia coli O55:H7 str. RM12579 plasmid p12579_4
Total Repeats: 76
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017658 | CAT | 3 | 9 | 31 | 39 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
2 | NC_017658 | ATT | 4 | 12 | 117 | 128 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
3 | NC_017658 | TCA | 2 | 6 | 154 | 159 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504714 |
4 | NC_017658 | CGC | 2 | 6 | 305 | 310 | 0 % | 0 % | 33.33 % | 66.67 % | 387504714 |
5 | NC_017658 | GTG | 2 | 6 | 433 | 438 | 0 % | 33.33 % | 66.67 % | 0 % | 387504714 |
6 | NC_017658 | ATC | 2 | 6 | 500 | 505 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504714 |
7 | NC_017658 | TCG | 2 | 6 | 514 | 519 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504714 |
8 | NC_017658 | CAT | 2 | 6 | 575 | 580 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504714 |
9 | NC_017658 | GCG | 2 | 6 | 591 | 596 | 0 % | 0 % | 66.67 % | 33.33 % | 387504714 |
10 | NC_017658 | GCT | 2 | 6 | 687 | 692 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504714 |
11 | NC_017658 | GCC | 3 | 9 | 849 | 857 | 0 % | 0 % | 33.33 % | 66.67 % | 387504714 |
12 | NC_017658 | GGC | 2 | 6 | 923 | 928 | 0 % | 0 % | 66.67 % | 33.33 % | 387504714 |
13 | NC_017658 | TCA | 2 | 6 | 991 | 996 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
14 | NC_017658 | GTG | 2 | 6 | 1105 | 1110 | 0 % | 33.33 % | 66.67 % | 0 % | 387504715 |
15 | NC_017658 | CGC | 2 | 6 | 1146 | 1151 | 0 % | 0 % | 33.33 % | 66.67 % | 387504715 |
16 | NC_017658 | TCA | 2 | 6 | 1219 | 1224 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504715 |
17 | NC_017658 | AGG | 2 | 6 | 1231 | 1236 | 33.33 % | 0 % | 66.67 % | 0 % | 387504715 |
18 | NC_017658 | AGG | 2 | 6 | 1240 | 1245 | 33.33 % | 0 % | 66.67 % | 0 % | 387504715 |
19 | NC_017658 | CGG | 2 | 6 | 1282 | 1287 | 0 % | 0 % | 66.67 % | 33.33 % | 387504715 |
20 | NC_017658 | GCA | 2 | 6 | 1334 | 1339 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504715 |
21 | NC_017658 | CTT | 2 | 6 | 1451 | 1456 | 0 % | 66.67 % | 0 % | 33.33 % | 387504715 |
22 | NC_017658 | CGC | 2 | 6 | 1477 | 1482 | 0 % | 0 % | 33.33 % | 66.67 % | 387504715 |
23 | NC_017658 | GTT | 2 | 6 | 1551 | 1556 | 0 % | 66.67 % | 33.33 % | 0 % | 387504715 |
24 | NC_017658 | TGG | 2 | 6 | 1588 | 1593 | 0 % | 33.33 % | 66.67 % | 0 % | 387504715 |
25 | NC_017658 | GGC | 2 | 6 | 1633 | 1638 | 0 % | 0 % | 66.67 % | 33.33 % | 387504715 |
26 | NC_017658 | CAG | 2 | 6 | 1645 | 1650 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504715 |
27 | NC_017658 | GCC | 2 | 6 | 1828 | 1833 | 0 % | 0 % | 33.33 % | 66.67 % | 387504716 |
28 | NC_017658 | AGA | 2 | 6 | 1957 | 1962 | 66.67 % | 0 % | 33.33 % | 0 % | 387504716 |
29 | NC_017658 | TGA | 2 | 6 | 1969 | 1974 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504716 |
30 | NC_017658 | GAT | 2 | 6 | 2234 | 2239 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504716 |
31 | NC_017658 | ATG | 2 | 6 | 2294 | 2299 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504716 |
32 | NC_017658 | CAT | 2 | 6 | 2339 | 2344 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504716 |
33 | NC_017658 | CAT | 2 | 6 | 2350 | 2355 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504716 |
34 | NC_017658 | GCC | 2 | 6 | 2420 | 2425 | 0 % | 0 % | 33.33 % | 66.67 % | 387504716 |
35 | NC_017658 | GAC | 2 | 6 | 2453 | 2458 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504716 |
36 | NC_017658 | GTT | 2 | 6 | 2813 | 2818 | 0 % | 66.67 % | 33.33 % | 0 % | 387504717 |
37 | NC_017658 | TCA | 2 | 6 | 2830 | 2835 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504717 |
38 | NC_017658 | GGC | 2 | 6 | 2844 | 2849 | 0 % | 0 % | 66.67 % | 33.33 % | 387504717 |
39 | NC_017658 | CCG | 2 | 6 | 2862 | 2867 | 0 % | 0 % | 33.33 % | 66.67 % | 387504717 |
40 | NC_017658 | GCC | 2 | 6 | 2969 | 2974 | 0 % | 0 % | 33.33 % | 66.67 % | 387504717 |
41 | NC_017658 | TTC | 2 | 6 | 2988 | 2993 | 0 % | 66.67 % | 0 % | 33.33 % | 387504717 |
42 | NC_017658 | GCC | 2 | 6 | 3151 | 3156 | 0 % | 0 % | 33.33 % | 66.67 % | 387504717 |
43 | NC_017658 | ATG | 2 | 6 | 3337 | 3342 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
44 | NC_017658 | TTA | 2 | 6 | 3350 | 3355 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
45 | NC_017658 | CAG | 2 | 6 | 3360 | 3365 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
46 | NC_017658 | TTC | 2 | 6 | 3386 | 3391 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
47 | NC_017658 | TGA | 2 | 6 | 3423 | 3428 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
48 | NC_017658 | ACT | 2 | 6 | 3457 | 3462 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
49 | NC_017658 | CCA | 2 | 6 | 3473 | 3478 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
50 | NC_017658 | ACC | 3 | 9 | 3481 | 3489 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
51 | NC_017658 | CAT | 2 | 6 | 3528 | 3533 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
52 | NC_017658 | ACC | 2 | 6 | 3565 | 3570 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
53 | NC_017658 | TAC | 2 | 6 | 3676 | 3681 | 33.33 % | 33.33 % | 0 % | 33.33 % | Non-Coding |
54 | NC_017658 | CTG | 2 | 6 | 3775 | 3780 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504718 |
55 | NC_017658 | AGG | 2 | 6 | 4005 | 4010 | 33.33 % | 0 % | 66.67 % | 0 % | 387504718 |
56 | NC_017658 | CAG | 2 | 6 | 4064 | 4069 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504718 |
57 | NC_017658 | GCA | 2 | 6 | 4084 | 4089 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504718 |
58 | NC_017658 | GAG | 2 | 6 | 4151 | 4156 | 33.33 % | 0 % | 66.67 % | 0 % | 387504718 |
59 | NC_017658 | AAC | 2 | 6 | 4161 | 4166 | 66.67 % | 0 % | 0 % | 33.33 % | 387504718 |
60 | NC_017658 | CAA | 2 | 6 | 4352 | 4357 | 66.67 % | 0 % | 0 % | 33.33 % | Non-Coding |
61 | NC_017658 | ACC | 2 | 6 | 4358 | 4363 | 33.33 % | 0 % | 0 % | 66.67 % | Non-Coding |
62 | NC_017658 | TTC | 2 | 6 | 4478 | 4483 | 0 % | 66.67 % | 0 % | 33.33 % | Non-Coding |
63 | NC_017658 | ATG | 2 | 6 | 4631 | 4636 | 33.33 % | 33.33 % | 33.33 % | 0 % | Non-Coding |
64 | NC_017658 | GAA | 2 | 6 | 4716 | 4721 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
65 | NC_017658 | ATT | 2 | 6 | 4814 | 4819 | 33.33 % | 66.67 % | 0 % | 0 % | Non-Coding |
66 | NC_017658 | GTT | 2 | 6 | 5139 | 5144 | 0 % | 66.67 % | 33.33 % | 0 % | 387504719 |
67 | NC_017658 | CAT | 2 | 6 | 5145 | 5150 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504719 |
68 | NC_017658 | GTT | 2 | 6 | 5188 | 5193 | 0 % | 66.67 % | 33.33 % | 0 % | Non-Coding |
69 | NC_017658 | GCA | 2 | 6 | 5314 | 5319 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504720 |
70 | NC_017658 | CAG | 2 | 6 | 5329 | 5334 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504720 |
71 | NC_017658 | GCG | 2 | 6 | 5400 | 5405 | 0 % | 0 % | 66.67 % | 33.33 % | 387504720 |
72 | NC_017658 | AGA | 2 | 6 | 5470 | 5475 | 66.67 % | 0 % | 33.33 % | 0 % | 387504720 |
73 | NC_017658 | GTG | 2 | 6 | 5553 | 5558 | 0 % | 33.33 % | 66.67 % | 0 % | 387504720 |
74 | NC_017658 | GCA | 2 | 6 | 5827 | 5832 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |
75 | NC_017658 | AAG | 2 | 6 | 6054 | 6059 | 66.67 % | 0 % | 33.33 % | 0 % | Non-Coding |
76 | NC_017658 | GCA | 2 | 6 | 6163 | 6168 | 33.33 % | 0 % | 33.33 % | 33.33 % | Non-Coding |