Penta-nucleotide Repeats of Escherichia coli O55:H7 str. RM12579 plasmid p12579_2
Total Repeats: 50
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017657 | TGTAC | 2 | 10 | 500 | 509 | 20 % | 40 % | 20 % | 20 % | 387504846 |
2 | NC_017657 | GGAAG | 2 | 10 | 1176 | 1185 | 40 % | 0 % | 60 % | 0 % | Non-Coding |
3 | NC_017657 | CCGCT | 2 | 10 | 4669 | 4678 | 0 % | 20 % | 20 % | 60 % | 387504850 |
4 | NC_017657 | TGGCA | 2 | 10 | 5258 | 5267 | 20 % | 20 % | 40 % | 20 % | 387504851 |
5 | NC_017657 | TTTAT | 2 | 10 | 5698 | 5707 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
6 | NC_017657 | CAGGG | 2 | 10 | 7254 | 7263 | 20 % | 0 % | 60 % | 20 % | 387504854 |
7 | NC_017657 | ACCTG | 2 | 10 | 10338 | 10347 | 20 % | 20 % | 20 % | 40 % | 387504860 |
8 | NC_017657 | CTGGT | 2 | 10 | 10613 | 10622 | 0 % | 40 % | 40 % | 20 % | 387504861 |
9 | NC_017657 | GAACG | 2 | 10 | 11064 | 11073 | 40 % | 0 % | 40 % | 20 % | 387504861 |
10 | NC_017657 | TCGGG | 2 | 10 | 12801 | 12810 | 0 % | 20 % | 60 % | 20 % | 387504864 |
11 | NC_017657 | TCTGT | 2 | 10 | 13647 | 13656 | 0 % | 60 % | 20 % | 20 % | 387504866 |
12 | NC_017657 | CGTTC | 2 | 10 | 17488 | 17497 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
13 | NC_017657 | CGGCA | 2 | 10 | 17773 | 17782 | 20 % | 0 % | 40 % | 40 % | 387504869 |
14 | NC_017657 | ATGCT | 2 | 10 | 19989 | 19998 | 20 % | 40 % | 20 % | 20 % | 387504870 |
15 | NC_017657 | CCCGG | 2 | 10 | 23492 | 23501 | 0 % | 0 % | 40 % | 60 % | 387504873 |
16 | NC_017657 | GAGGT | 2 | 10 | 23993 | 24002 | 20 % | 20 % | 60 % | 0 % | 387504874 |
17 | NC_017657 | GAGGT | 2 | 10 | 26448 | 26457 | 20 % | 20 % | 60 % | 0 % | 387504878 |
18 | NC_017657 | AGTGG | 2 | 10 | 27408 | 27417 | 20 % | 20 % | 60 % | 0 % | 387504879 |
19 | NC_017657 | TCGTT | 2 | 10 | 28410 | 28419 | 0 % | 60 % | 20 % | 20 % | 387504880 |
20 | NC_017657 | GTTCA | 2 | 10 | 29491 | 29500 | 20 % | 40 % | 20 % | 20 % | 387504882 |
21 | NC_017657 | CCTGT | 2 | 10 | 30965 | 30974 | 0 % | 40 % | 20 % | 40 % | Non-Coding |
22 | NC_017657 | GCCCC | 2 | 10 | 31120 | 31129 | 0 % | 0 % | 20 % | 80 % | Non-Coding |
23 | NC_017657 | CTGAA | 2 | 10 | 31573 | 31582 | 40 % | 20 % | 20 % | 20 % | 387504885 |
24 | NC_017657 | TATTG | 2 | 10 | 33535 | 33544 | 20 % | 60 % | 20 % | 0 % | Non-Coding |
25 | NC_017657 | TCTTT | 2 | 10 | 34176 | 34185 | 0 % | 80 % | 0 % | 20 % | 387504889 |
26 | NC_017657 | TCAGT | 2 | 10 | 37133 | 37142 | 20 % | 40 % | 20 % | 20 % | 387504891 |
27 | NC_017657 | AGAAA | 2 | 10 | 37679 | 37688 | 80 % | 0 % | 20 % | 0 % | 387504891 |
28 | NC_017657 | CGGCC | 2 | 10 | 39433 | 39442 | 0 % | 0 % | 40 % | 60 % | Non-Coding |
29 | NC_017657 | GGCTG | 2 | 10 | 45735 | 45744 | 0 % | 20 % | 60 % | 20 % | 387504897 |
30 | NC_017657 | CGGGC | 2 | 10 | 46988 | 46997 | 0 % | 0 % | 60 % | 40 % | 387504898 |
31 | NC_017657 | GTTCG | 2 | 10 | 47627 | 47636 | 0 % | 40 % | 40 % | 20 % | 387504899 |
32 | NC_017657 | AAGGT | 2 | 10 | 47976 | 47985 | 40 % | 20 % | 40 % | 0 % | 387504899 |
33 | NC_017657 | GTACA | 2 | 10 | 47996 | 48005 | 40 % | 20 % | 20 % | 20 % | 387504899 |
34 | NC_017657 | CAAAA | 2 | 10 | 48471 | 48480 | 80 % | 0 % | 0 % | 20 % | Non-Coding |
35 | NC_017657 | ATTTT | 2 | 10 | 48835 | 48844 | 20 % | 80 % | 0 % | 0 % | Non-Coding |
36 | NC_017657 | AAAAT | 2 | 10 | 49254 | 49263 | 80 % | 20 % | 0 % | 0 % | Non-Coding |
37 | NC_017657 | ACGTA | 2 | 10 | 55113 | 55122 | 40 % | 20 % | 20 % | 20 % | 387504909 |
38 | NC_017657 | CTTCT | 2 | 10 | 55568 | 55577 | 0 % | 60 % | 0 % | 40 % | 387504910 |
39 | NC_017657 | ACATA | 2 | 10 | 56196 | 56205 | 60 % | 20 % | 0 % | 20 % | Non-Coding |
40 | NC_017657 | CAGCT | 2 | 10 | 56311 | 56320 | 20 % | 20 % | 20 % | 40 % | Non-Coding |
41 | NC_017657 | ATTTT | 2 | 10 | 58591 | 58600 | 20 % | 80 % | 0 % | 0 % | 387504913 |
42 | NC_017657 | TGGCA | 2 | 10 | 59116 | 59125 | 20 % | 20 % | 40 % | 20 % | Non-Coding |
43 | NC_017657 | AAAGA | 2 | 10 | 59475 | 59484 | 80 % | 0 % | 20 % | 0 % | 387504915 |
44 | NC_017657 | CAGTA | 2 | 10 | 59764 | 59773 | 40 % | 20 % | 20 % | 20 % | 387504915 |
45 | NC_017657 | ACCGG | 2 | 10 | 63106 | 63115 | 20 % | 0 % | 40 % | 40 % | 387504919 |
46 | NC_017657 | CGCGG | 2 | 10 | 63239 | 63248 | 0 % | 0 % | 60 % | 40 % | Non-Coding |
47 | NC_017657 | ACGGG | 2 | 10 | 63291 | 63300 | 20 % | 0 % | 60 % | 20 % | Non-Coding |
48 | NC_017657 | GCTGG | 2 | 10 | 63937 | 63946 | 0 % | 20 % | 60 % | 20 % | 387504920 |
49 | NC_017657 | ATGGA | 2 | 10 | 64565 | 64574 | 40 % | 20 % | 40 % | 0 % | 387504922 |
50 | NC_017657 | CCGCC | 2 | 10 | 65608 | 65617 | 0 % | 0 % | 20 % | 80 % | Non-Coding |