Tri-nucleotide Coding Repeats of Escherichia coli O55:H7 str. RM12579 plasmid p12579_3
Total Repeats: 112
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017654 | TTG | 2 | 6 | 372 | 377 | 0 % | 66.67 % | 33.33 % | 0 % | 387504829 |
2 | NC_017654 | CGT | 2 | 6 | 861 | 866 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504830 |
3 | NC_017654 | TGC | 2 | 6 | 909 | 914 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504830 |
4 | NC_017654 | TTG | 2 | 6 | 1035 | 1040 | 0 % | 66.67 % | 33.33 % | 0 % | 387504830 |
5 | NC_017654 | GTT | 2 | 6 | 1087 | 1092 | 0 % | 66.67 % | 33.33 % | 0 % | 387504830 |
6 | NC_017654 | TGC | 2 | 6 | 1098 | 1103 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504830 |
7 | NC_017654 | GTG | 2 | 6 | 1111 | 1116 | 0 % | 33.33 % | 66.67 % | 0 % | 387504830 |
8 | NC_017654 | TCG | 2 | 6 | 1123 | 1128 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504830 |
9 | NC_017654 | TGT | 2 | 6 | 1190 | 1195 | 0 % | 66.67 % | 33.33 % | 0 % | 387504830 |
10 | NC_017654 | TCC | 2 | 6 | 1221 | 1226 | 0 % | 33.33 % | 0 % | 66.67 % | 387504830 |
11 | NC_017654 | GCA | 2 | 6 | 1249 | 1254 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504830 |
12 | NC_017654 | GCA | 2 | 6 | 1276 | 1281 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504830 |
13 | NC_017654 | GCG | 2 | 6 | 1371 | 1376 | 0 % | 0 % | 66.67 % | 33.33 % | 387504830 |
14 | NC_017654 | ATA | 2 | 6 | 1409 | 1414 | 66.67 % | 33.33 % | 0 % | 0 % | 387504830 |
15 | NC_017654 | CAC | 2 | 6 | 1418 | 1423 | 33.33 % | 0 % | 0 % | 66.67 % | 387504830 |
16 | NC_017654 | TCA | 2 | 6 | 1445 | 1450 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504830 |
17 | NC_017654 | TTC | 2 | 6 | 1461 | 1466 | 0 % | 66.67 % | 0 % | 33.33 % | 387504830 |
18 | NC_017654 | TGA | 2 | 6 | 1887 | 1892 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504831 |
19 | NC_017654 | TGA | 2 | 6 | 1920 | 1925 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504831 |
20 | NC_017654 | ACG | 2 | 6 | 1935 | 1940 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504831 |
21 | NC_017654 | TCC | 2 | 6 | 2023 | 2028 | 0 % | 33.33 % | 0 % | 66.67 % | 387504831 |
22 | NC_017654 | ACC | 2 | 6 | 2064 | 2069 | 33.33 % | 0 % | 0 % | 66.67 % | 387504831 |
23 | NC_017654 | TCA | 2 | 6 | 2103 | 2108 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504831 |
24 | NC_017654 | CTT | 2 | 6 | 2192 | 2197 | 0 % | 66.67 % | 0 % | 33.33 % | 387504831 |
25 | NC_017654 | TCC | 2 | 6 | 2217 | 2222 | 0 % | 33.33 % | 0 % | 66.67 % | 387504831 |
26 | NC_017654 | CTG | 2 | 6 | 2345 | 2350 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504831 |
27 | NC_017654 | TGA | 2 | 6 | 2645 | 2650 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504832 |
28 | NC_017654 | CCG | 2 | 6 | 2852 | 2857 | 0 % | 0 % | 33.33 % | 66.67 % | 387504832 |
29 | NC_017654 | TAT | 2 | 6 | 3017 | 3022 | 33.33 % | 66.67 % | 0 % | 0 % | 387504832 |
30 | NC_017654 | TGC | 2 | 6 | 3142 | 3147 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504832 |
31 | NC_017654 | GCC | 2 | 6 | 3166 | 3171 | 0 % | 0 % | 33.33 % | 66.67 % | 387504832 |
32 | NC_017654 | ATG | 2 | 6 | 3430 | 3435 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504832 |
33 | NC_017654 | ATC | 2 | 6 | 3468 | 3473 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504832 |
34 | NC_017654 | CTG | 2 | 6 | 3567 | 3572 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504832 |
35 | NC_017654 | AGA | 2 | 6 | 3575 | 3580 | 66.67 % | 0 % | 33.33 % | 0 % | 387504832 |
36 | NC_017654 | ATC | 2 | 6 | 3645 | 3650 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504832 |
37 | NC_017654 | GAA | 2 | 6 | 3696 | 3701 | 66.67 % | 0 % | 33.33 % | 0 % | 387504832 |
38 | NC_017654 | TGG | 2 | 6 | 3703 | 3708 | 0 % | 33.33 % | 66.67 % | 0 % | 387504832 |
39 | NC_017654 | TCG | 2 | 6 | 3725 | 3730 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504832 |
40 | NC_017654 | CTG | 2 | 6 | 3744 | 3749 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504832 |
41 | NC_017654 | CGG | 2 | 6 | 3831 | 3836 | 0 % | 0 % | 66.67 % | 33.33 % | 387504832 |
42 | NC_017654 | GAC | 2 | 6 | 3846 | 3851 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504832 |
43 | NC_017654 | TAC | 2 | 6 | 4024 | 4029 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504832 |
44 | NC_017654 | TCA | 2 | 6 | 4118 | 4123 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504832 |
45 | NC_017654 | TGC | 2 | 6 | 4148 | 4153 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504832 |
46 | NC_017654 | TGA | 2 | 6 | 4235 | 4240 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504832 |
47 | NC_017654 | TGC | 2 | 6 | 4309 | 4314 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504832 |
48 | NC_017654 | TGA | 2 | 6 | 4343 | 4348 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504832 |
49 | NC_017654 | TGA | 2 | 6 | 4382 | 4387 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504832 |
50 | NC_017654 | GGA | 2 | 6 | 4593 | 4598 | 33.33 % | 0 % | 66.67 % | 0 % | 387504832 |
51 | NC_017654 | TAA | 2 | 6 | 4679 | 4684 | 66.67 % | 33.33 % | 0 % | 0 % | 387504832 |
52 | NC_017654 | TCT | 2 | 6 | 4787 | 4792 | 0 % | 66.67 % | 0 % | 33.33 % | 387504832 |
53 | NC_017654 | CAG | 2 | 6 | 4837 | 4842 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504832 |
54 | NC_017654 | GCT | 2 | 6 | 4874 | 4879 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504832 |
55 | NC_017654 | ATG | 2 | 6 | 4942 | 4947 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504832 |
56 | NC_017654 | CAA | 2 | 6 | 5144 | 5149 | 66.67 % | 0 % | 0 % | 33.33 % | 387504832 |
57 | NC_017654 | TGA | 3 | 9 | 5174 | 5182 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504832 |
58 | NC_017654 | CCG | 2 | 6 | 5189 | 5194 | 0 % | 0 % | 33.33 % | 66.67 % | 387504832 |
59 | NC_017654 | CGT | 2 | 6 | 5339 | 5344 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504832 |
60 | NC_017654 | ATC | 2 | 6 | 5380 | 5385 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504832 |
61 | NC_017654 | ATG | 2 | 6 | 5410 | 5415 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504832 |
62 | NC_017654 | ATT | 2 | 6 | 5470 | 5475 | 33.33 % | 66.67 % | 0 % | 0 % | 387504832 |
63 | NC_017654 | ATG | 2 | 6 | 6286 | 6291 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504833 |
64 | NC_017654 | CAA | 2 | 6 | 6367 | 6372 | 66.67 % | 0 % | 0 % | 33.33 % | 387504833 |
65 | NC_017654 | TGA | 2 | 6 | 6401 | 6406 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504833 |
66 | NC_017654 | AGC | 2 | 6 | 6431 | 6436 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504833 |
67 | NC_017654 | GCA | 2 | 6 | 6538 | 6543 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504833 |
68 | NC_017654 | GCT | 2 | 6 | 6596 | 6601 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504833 |
69 | NC_017654 | TGA | 2 | 6 | 6602 | 6607 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504833 |
70 | NC_017654 | TGA | 2 | 6 | 6827 | 6832 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504834 |
71 | NC_017654 | TGA | 2 | 6 | 6850 | 6855 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504834 |
72 | NC_017654 | AGG | 2 | 6 | 6862 | 6867 | 33.33 % | 0 % | 66.67 % | 0 % | 387504834 |
73 | NC_017654 | GCA | 2 | 6 | 6901 | 6906 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504834 |
74 | NC_017654 | CAT | 2 | 6 | 7005 | 7010 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504834 |
75 | NC_017654 | AAT | 2 | 6 | 7053 | 7058 | 66.67 % | 33.33 % | 0 % | 0 % | 387504834 |
76 | NC_017654 | TGT | 2 | 6 | 7073 | 7078 | 0 % | 66.67 % | 33.33 % | 0 % | 387504834 |
77 | NC_017654 | TGA | 2 | 6 | 7094 | 7099 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504834 |
78 | NC_017654 | AGA | 2 | 6 | 7168 | 7173 | 66.67 % | 0 % | 33.33 % | 0 % | 387504834 |
79 | NC_017654 | ACA | 2 | 6 | 7314 | 7319 | 66.67 % | 0 % | 0 % | 33.33 % | 387504835 |
80 | NC_017654 | AGG | 2 | 6 | 7622 | 7627 | 33.33 % | 0 % | 66.67 % | 0 % | 387504835 |
81 | NC_017654 | CAG | 2 | 6 | 8851 | 8856 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504837 |
82 | NC_017654 | TGA | 3 | 9 | 9004 | 9012 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504838 |
83 | NC_017654 | GCG | 2 | 6 | 9064 | 9069 | 0 % | 0 % | 66.67 % | 33.33 % | 387504838 |
84 | NC_017654 | CCG | 2 | 6 | 9122 | 9127 | 0 % | 0 % | 33.33 % | 66.67 % | 387504838 |
85 | NC_017654 | AAT | 2 | 6 | 9155 | 9160 | 66.67 % | 33.33 % | 0 % | 0 % | 387504838 |
86 | NC_017654 | GGT | 2 | 6 | 9220 | 9225 | 0 % | 33.33 % | 66.67 % | 0 % | 387504838 |
87 | NC_017654 | GTC | 2 | 6 | 9272 | 9277 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504838 |
88 | NC_017654 | GAT | 2 | 6 | 9296 | 9301 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504838 |
89 | NC_017654 | CTG | 2 | 6 | 9354 | 9359 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504839 |
90 | NC_017654 | GAA | 2 | 6 | 9408 | 9413 | 66.67 % | 0 % | 33.33 % | 0 % | 387504839 |
91 | NC_017654 | GAA | 2 | 6 | 9446 | 9451 | 66.67 % | 0 % | 33.33 % | 0 % | 387504839 |
92 | NC_017654 | GCC | 2 | 6 | 9491 | 9496 | 0 % | 0 % | 33.33 % | 66.67 % | 387504839 |
93 | NC_017654 | GGA | 2 | 6 | 9498 | 9503 | 33.33 % | 0 % | 66.67 % | 0 % | 387504839 |
94 | NC_017654 | TAC | 2 | 6 | 9663 | 9668 | 33.33 % | 33.33 % | 0 % | 33.33 % | 387504839 |
95 | NC_017654 | CCG | 2 | 6 | 9755 | 9760 | 0 % | 0 % | 33.33 % | 66.67 % | 387504839 |
96 | NC_017654 | CGG | 2 | 6 | 9950 | 9955 | 0 % | 0 % | 66.67 % | 33.33 % | 387504839 |
97 | NC_017654 | GAA | 2 | 6 | 9956 | 9961 | 66.67 % | 0 % | 33.33 % | 0 % | 387504839 |
98 | NC_017654 | ACG | 2 | 6 | 10064 | 10069 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504839 |
99 | NC_017654 | GAT | 2 | 6 | 10203 | 10208 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504839 |
100 | NC_017654 | GCA | 2 | 6 | 10209 | 10214 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504839 |
101 | NC_017654 | ATG | 2 | 6 | 10252 | 10257 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504839 |
102 | NC_017654 | GAA | 2 | 6 | 10339 | 10344 | 66.67 % | 0 % | 33.33 % | 0 % | 387504839 |
103 | NC_017654 | GAA | 2 | 6 | 10357 | 10362 | 66.67 % | 0 % | 33.33 % | 0 % | 387504839 |
104 | NC_017654 | CAG | 2 | 6 | 10675 | 10680 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504839 |
105 | NC_017654 | GCA | 2 | 6 | 10683 | 10688 | 33.33 % | 0 % | 33.33 % | 33.33 % | 387504839 |
106 | NC_017654 | GGT | 2 | 6 | 11211 | 11216 | 0 % | 33.33 % | 66.67 % | 0 % | 387504842 |
107 | NC_017654 | TTG | 2 | 6 | 11217 | 11222 | 0 % | 66.67 % | 33.33 % | 0 % | 387504842 |
108 | NC_017654 | CTG | 2 | 6 | 11237 | 11242 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504842 |
109 | NC_017654 | TGA | 2 | 6 | 11412 | 11417 | 33.33 % | 33.33 % | 33.33 % | 0 % | 387504843 |
110 | NC_017654 | ACC | 3 | 9 | 11429 | 11437 | 33.33 % | 0 % | 0 % | 66.67 % | 387504843 |
111 | NC_017654 | ATA | 2 | 6 | 11475 | 11480 | 66.67 % | 33.33 % | 0 % | 0 % | 387504843 |
112 | NC_017654 | GCT | 2 | 6 | 11528 | 11533 | 0 % | 33.33 % | 33.33 % | 33.33 % | 387504843 |