MICAS: Microsatellite Analysis Server 3.0

Hexa-nucleotide Non-Coding Repeats of Leptospira interrogans serovar Lai str. IPAV chromosome chromosome 2

Total Repeats: 31

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017552	TGGAAG	2	12	20823	20834	33.33 %	16.67 %	50 %	0 %	Non-Coding
2	NC_017552	TTCTCT	2	12	35048	35059	0 %	66.67 %	0 %	33.33 %	Non-Coding
3	NC_017552	AATAGT	2	12	35662	35673	50 %	33.33 %	16.67 %	0 %	Non-Coding
4	NC_017552	AAAAAC	2	12	73837	73848	83.33 %	0 %	0 %	16.67 %	Non-Coding
5	NC_017552	TTTCGA	2	12	90137	90148	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
6	NC_017552	TTTAAT	2	12	91545	91556	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_017552	AAATTT	2	12	101735	101746	50 %	50 %	0 %	0 %	Non-Coding
8	NC_017552	ATGAAT	2	12	106403	106414	50 %	33.33 %	16.67 %	0 %	Non-Coding
9	NC_017552	ATCTAT	2	12	117154	117165	33.33 %	50 %	0 %	16.67 %	Non-Coding
10	NC_017552	AGATCA	2	12	125912	125923	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
11	NC_017552	GTTTTT	2	12	126711	126722	0 %	83.33 %	16.67 %	0 %	Non-Coding
12	NC_017552	TAAAAA	2	12	129877	129888	83.33 %	16.67 %	0 %	0 %	Non-Coding
13	NC_017552	TCGGCC	2	12	181002	181013	0 %	16.67 %	33.33 %	50 %	Non-Coding
14	NC_017552	AGTCAA	2	12	209285	209296	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
15	NC_017552	TTAAAA	2	12	232436	232447	66.67 %	33.33 %	0 %	0 %	Non-Coding
16	NC_017552	ATCAAA	2	12	234234	234245	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
17	NC_017552	ACAAAA	2	12	234323	234334	83.33 %	0 %	0 %	16.67 %	Non-Coding
18	NC_017552	TTTGAT	2	12	236166	236177	16.67 %	66.67 %	16.67 %	0 %	Non-Coding
19	NC_017552	AAACAA	2	12	250833	250844	83.33 %	0 %	0 %	16.67 %	Non-Coding
20	NC_017552	TGGTTA	2	12	275879	275890	16.67 %	50 %	33.33 %	0 %	Non-Coding
21	NC_017552	TATAAA	2	12	283652	283663	66.67 %	33.33 %	0 %	0 %	Non-Coding
22	NC_017552	GAAACA	2	12	286906	286917	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
23	NC_017552	GAAACA	2	12	296436	296447	66.67 %	0 %	16.67 %	16.67 %	Non-Coding
24	NC_017552	AATATA	2	12	301228	301239	66.67 %	33.33 %	0 %	0 %	Non-Coding
25	NC_017552	AAACAA	2	12	305205	305216	83.33 %	0 %	0 %	16.67 %	Non-Coding
26	NC_017552	CAAAAT	2	12	305386	305397	66.67 %	16.67 %	0 %	16.67 %	Non-Coding
27	NC_017552	AAAATT	2	12	316055	316066	66.67 %	33.33 %	0 %	0 %	Non-Coding
28	NC_017552	GAAATC	2	12	328873	328884	50 %	16.67 %	16.67 %	16.67 %	Non-Coding
29	NC_017552	CCATTA	2	12	330272	330283	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
30	NC_017552	TGTTTC	2	12	347211	347222	0 %	66.67 %	16.67 %	16.67 %	Non-Coding
31	NC_017552	ATTTTT	2	12	352256	352267	16.67 %	83.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.