Hexa-nucleotide Coding Repeats of Leptospira interrogans serovar Lai str. IPAV chromosome chromosome 2
Total Repeats: 149
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017552 | CGGAGA | 2 | 12 | 1040 | 1051 | 33.33 % | 0 % | 50 % | 16.67 % | 386076038 |
2 | NC_017552 | AGGAGA | 2 | 12 | 2883 | 2894 | 50 % | 0 % | 50 % | 0 % | 386076039 |
3 | NC_017552 | TTCTTT | 2 | 12 | 4075 | 4086 | 0 % | 83.33 % | 0 % | 16.67 % | 386076040 |
4 | NC_017552 | GAACCG | 2 | 12 | 4512 | 4523 | 33.33 % | 0 % | 33.33 % | 33.33 % | 386076040 |
5 | NC_017552 | AAAAGA | 2 | 12 | 8973 | 8984 | 83.33 % | 0 % | 16.67 % | 0 % | 386076044 |
6 | NC_017552 | ATTTTT | 2 | 12 | 12282 | 12293 | 16.67 % | 83.33 % | 0 % | 0 % | 386076047 |
7 | NC_017552 | TTTGAC | 2 | 12 | 12923 | 12934 | 16.67 % | 50 % | 16.67 % | 16.67 % | 386076048 |
8 | NC_017552 | TTCCAA | 2 | 12 | 18743 | 18754 | 33.33 % | 33.33 % | 0 % | 33.33 % | 386076052 |
9 | NC_017552 | TGGAAT | 2 | 12 | 19068 | 19079 | 33.33 % | 33.33 % | 33.33 % | 0 % | 386076052 |
10 | NC_017552 | TTTAGA | 2 | 12 | 21752 | 21763 | 33.33 % | 50 % | 16.67 % | 0 % | 386076055 |
11 | NC_017552 | TAAATT | 2 | 12 | 22117 | 22128 | 50 % | 50 % | 0 % | 0 % | 386076055 |
12 | NC_017552 | GGAAAA | 2 | 12 | 22416 | 22427 | 66.67 % | 0 % | 33.33 % | 0 % | 386076056 |
13 | NC_017552 | GGATTT | 2 | 12 | 22718 | 22729 | 16.67 % | 50 % | 33.33 % | 0 % | 386076056 |
14 | NC_017552 | TTTTGT | 2 | 12 | 24249 | 24260 | 0 % | 83.33 % | 16.67 % | 0 % | 386076058 |
15 | NC_017552 | AAAAAT | 2 | 12 | 25500 | 25511 | 83.33 % | 16.67 % | 0 % | 0 % | 386076059 |
16 | NC_017552 | GAAAAA | 2 | 12 | 25718 | 25729 | 83.33 % | 0 % | 16.67 % | 0 % | 386076059 |
17 | NC_017552 | GACGGA | 2 | 12 | 32288 | 32299 | 33.33 % | 0 % | 50 % | 16.67 % | 386076067 |
18 | NC_017552 | CTTGGA | 2 | 12 | 32658 | 32669 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 386076068 |
19 | NC_017552 | TGATCG | 2 | 12 | 34079 | 34090 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 386076070 |
20 | NC_017552 | GAAAAA | 2 | 12 | 36808 | 36819 | 83.33 % | 0 % | 16.67 % | 0 % | 386076072 |
21 | NC_017552 | GGAAAA | 2 | 12 | 37030 | 37041 | 66.67 % | 0 % | 33.33 % | 0 % | 386076072 |
22 | NC_017552 | TGGAAT | 2 | 12 | 38590 | 38601 | 33.33 % | 33.33 % | 33.33 % | 0 % | 386076073 |
23 | NC_017552 | GTTTAA | 2 | 12 | 45564 | 45575 | 33.33 % | 50 % | 16.67 % | 0 % | 386076080 |
24 | NC_017552 | ATTCTA | 2 | 12 | 45990 | 46001 | 33.33 % | 50 % | 0 % | 16.67 % | 386076080 |
25 | NC_017552 | CGGAAT | 2 | 12 | 48083 | 48094 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 386076082 |
26 | NC_017552 | AACCAA | 2 | 12 | 50678 | 50689 | 66.67 % | 0 % | 0 % | 33.33 % | 386076084 |
27 | NC_017552 | GAATTA | 2 | 12 | 54322 | 54333 | 50 % | 33.33 % | 16.67 % | 0 % | 386076088 |
28 | NC_017552 | TAGGGG | 2 | 12 | 54474 | 54485 | 16.67 % | 16.67 % | 66.67 % | 0 % | 386076088 |
29 | NC_017552 | TTTTCT | 2 | 12 | 71096 | 71107 | 0 % | 83.33 % | 0 % | 16.67 % | 386076101 |
30 | NC_017552 | GGAAAT | 2 | 12 | 72134 | 72145 | 50 % | 16.67 % | 33.33 % | 0 % | 386076101 |
31 | NC_017552 | AGTTTT | 2 | 12 | 79349 | 79360 | 16.67 % | 66.67 % | 16.67 % | 0 % | 386076109 |
32 | NC_017552 | TTGAAC | 2 | 12 | 79966 | 79977 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 386076109 |
33 | NC_017552 | TTTCTT | 2 | 12 | 81963 | 81974 | 0 % | 83.33 % | 0 % | 16.67 % | 386076112 |
34 | NC_017552 | CAAAAA | 2 | 12 | 85115 | 85126 | 83.33 % | 0 % | 0 % | 16.67 % | 386076114 |
35 | NC_017552 | GAAAAA | 2 | 12 | 85160 | 85171 | 83.33 % | 0 % | 16.67 % | 0 % | 386076114 |
36 | NC_017552 | AGCAGA | 2 | 12 | 86158 | 86169 | 50 % | 0 % | 33.33 % | 16.67 % | 386076114 |
37 | NC_017552 | AAAAAT | 2 | 12 | 86309 | 86320 | 83.33 % | 16.67 % | 0 % | 0 % | 386076114 |
38 | NC_017552 | ATAGAA | 2 | 12 | 89054 | 89065 | 66.67 % | 16.67 % | 16.67 % | 0 % | 386076116 |
39 | NC_017552 | TTGCTT | 2 | 12 | 89211 | 89222 | 0 % | 66.67 % | 16.67 % | 16.67 % | 386076116 |
40 | NC_017552 | TTTTTC | 2 | 12 | 90895 | 90906 | 0 % | 83.33 % | 0 % | 16.67 % | 386076117 |
41 | NC_017552 | GAATTC | 2 | 12 | 94718 | 94729 | 33.33 % | 33.33 % | 16.67 % | 16.67 % | 386076121 |
42 | NC_017552 | TTTCTT | 2 | 12 | 99058 | 99069 | 0 % | 83.33 % | 0 % | 16.67 % | 386076124 |
43 | NC_017552 | TGGAAC | 2 | 12 | 102078 | 102089 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 386076126 |
44 | NC_017552 | AAACCA | 2 | 12 | 102457 | 102468 | 66.67 % | 0 % | 0 % | 33.33 % | 386076126 |
45 | NC_017552 | TCTAAT | 2 | 12 | 105154 | 105165 | 33.33 % | 50 % | 0 % | 16.67 % | 386076128 |
46 | NC_017552 | TTCGAT | 2 | 12 | 106896 | 106907 | 16.67 % | 50 % | 16.67 % | 16.67 % | 386076129 |
47 | NC_017552 | CAAAGT | 2 | 12 | 107614 | 107625 | 50 % | 16.67 % | 16.67 % | 16.67 % | 386076130 |
48 | NC_017552 | TTTTCA | 2 | 12 | 118926 | 118937 | 16.67 % | 66.67 % | 0 % | 16.67 % | 386076139 |
49 | NC_017552 | TTGCAG | 2 | 12 | 122299 | 122310 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 386076142 |
50 | NC_017552 | TCAAAA | 2 | 12 | 127729 | 127740 | 66.67 % | 16.67 % | 0 % | 16.67 % | 386076145 |
51 | NC_017552 | TTGGGA | 2 | 12 | 128232 | 128243 | 16.67 % | 33.33 % | 50 % | 0 % | 386076145 |
52 | NC_017552 | TTTCAA | 2 | 12 | 128504 | 128515 | 33.33 % | 50 % | 0 % | 16.67 % | 386076145 |
53 | NC_017552 | GTTAAT | 2 | 12 | 131184 | 131195 | 33.33 % | 50 % | 16.67 % | 0 % | 386076148 |
54 | NC_017552 | TTTCTT | 2 | 12 | 131585 | 131596 | 0 % | 83.33 % | 0 % | 16.67 % | 386076148 |
55 | NC_017552 | CAATTT | 2 | 12 | 137192 | 137203 | 33.33 % | 50 % | 0 % | 16.67 % | 386076151 |
56 | NC_017552 | TGCCAT | 2 | 12 | 138240 | 138251 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 386076152 |
57 | NC_017552 | AAAACT | 2 | 12 | 138741 | 138752 | 66.67 % | 16.67 % | 0 % | 16.67 % | 386076153 |
58 | NC_017552 | GATAAA | 2 | 12 | 142351 | 142362 | 66.67 % | 16.67 % | 16.67 % | 0 % | 386076156 |
59 | NC_017552 | CTTTTG | 2 | 12 | 143254 | 143265 | 0 % | 66.67 % | 16.67 % | 16.67 % | 386076157 |
60 | NC_017552 | TTTTTG | 2 | 12 | 144902 | 144913 | 0 % | 83.33 % | 16.67 % | 0 % | 386076159 |
61 | NC_017552 | TCTAAC | 2 | 12 | 146101 | 146112 | 33.33 % | 33.33 % | 0 % | 33.33 % | 386076160 |
62 | NC_017552 | CAAGTC | 2 | 12 | 148208 | 148219 | 33.33 % | 16.67 % | 16.67 % | 33.33 % | 386076161 |
63 | NC_017552 | CTTTTT | 2 | 12 | 149414 | 149425 | 0 % | 83.33 % | 0 % | 16.67 % | 386076163 |
64 | NC_017552 | AGTGCG | 2 | 12 | 150581 | 150592 | 16.67 % | 16.67 % | 50 % | 16.67 % | 386076163 |
65 | NC_017552 | TGTCTT | 2 | 12 | 152932 | 152943 | 0 % | 66.67 % | 16.67 % | 16.67 % | 386076166 |
66 | NC_017552 | TTTTCG | 2 | 12 | 154638 | 154649 | 0 % | 66.67 % | 16.67 % | 16.67 % | 386076168 |
67 | NC_017552 | TCTGGA | 2 | 12 | 155631 | 155642 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 386076169 |
68 | NC_017552 | TTCCGA | 2 | 12 | 156343 | 156354 | 16.67 % | 33.33 % | 16.67 % | 33.33 % | 386076169 |
69 | NC_017552 | CGGTTA | 2 | 12 | 167194 | 167205 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 386076177 |
70 | NC_017552 | AAAATT | 2 | 12 | 167478 | 167489 | 66.67 % | 33.33 % | 0 % | 0 % | 386076177 |
71 | NC_017552 | AAGGGA | 2 | 12 | 171732 | 171743 | 50 % | 0 % | 50 % | 0 % | 386076181 |
72 | NC_017552 | GTTCAG | 2 | 12 | 172467 | 172478 | 16.67 % | 33.33 % | 33.33 % | 16.67 % | 386076182 |
73 | NC_017552 | CGATTT | 2 | 12 | 173240 | 173251 | 16.67 % | 50 % | 16.67 % | 16.67 % | 386076182 |
74 | NC_017552 | AAAAGA | 2 | 12 | 176952 | 176963 | 83.33 % | 0 % | 16.67 % | 0 % | 386076184 |
75 | NC_017552 | TAAAAA | 2 | 12 | 179383 | 179394 | 83.33 % | 16.67 % | 0 % | 0 % | 386076185 |
76 | NC_017552 | TTGATT | 2 | 12 | 179429 | 179440 | 16.67 % | 66.67 % | 16.67 % | 0 % | 386076185 |
77 | NC_017552 | AAGGAA | 2 | 12 | 181973 | 181984 | 66.67 % | 0 % | 33.33 % | 0 % | 386076187 |
78 | NC_017552 | GTAGAA | 2 | 12 | 187376 | 187387 | 50 % | 16.67 % | 33.33 % | 0 % | 386076191 |
79 | NC_017552 | AGTGTA | 2 | 12 | 187927 | 187938 | 33.33 % | 33.33 % | 33.33 % | 0 % | 386076192 |
80 | NC_017552 | TTTTCT | 2 | 12 | 189758 | 189769 | 0 % | 83.33 % | 0 % | 16.67 % | 386076194 |
81 | NC_017552 | AATAAA | 2 | 12 | 189931 | 189942 | 83.33 % | 16.67 % | 0 % | 0 % | 386076194 |
82 | NC_017552 | AGAAAG | 2 | 12 | 193712 | 193723 | 66.67 % | 0 % | 33.33 % | 0 % | 386076197 |
83 | NC_017552 | TTTTGA | 2 | 12 | 194863 | 194874 | 16.67 % | 66.67 % | 16.67 % | 0 % | 386076198 |
84 | NC_017552 | TTTTGA | 2 | 12 | 196333 | 196344 | 16.67 % | 66.67 % | 16.67 % | 0 % | 386076199 |
85 | NC_017552 | ATCGTT | 2 | 12 | 198827 | 198838 | 16.67 % | 50 % | 16.67 % | 16.67 % | 386076201 |
86 | NC_017552 | GATTTT | 2 | 12 | 200302 | 200313 | 16.67 % | 66.67 % | 16.67 % | 0 % | 386076202 |
87 | NC_017552 | TTTTTA | 2 | 12 | 200916 | 200927 | 16.67 % | 83.33 % | 0 % | 0 % | 386076203 |
88 | NC_017552 | TGATTT | 2 | 12 | 202169 | 202180 | 16.67 % | 66.67 % | 16.67 % | 0 % | 386076203 |
89 | NC_017552 | GTGAAT | 2 | 12 | 202728 | 202739 | 33.33 % | 33.33 % | 33.33 % | 0 % | 386076204 |
90 | NC_017552 | AAATCC | 2 | 12 | 202850 | 202861 | 50 % | 16.67 % | 0 % | 33.33 % | 386076204 |
91 | NC_017552 | TTATAT | 2 | 12 | 204259 | 204270 | 33.33 % | 66.67 % | 0 % | 0 % | 386076205 |
92 | NC_017552 | TACGTT | 2 | 12 | 204325 | 204336 | 16.67 % | 50 % | 16.67 % | 16.67 % | 386076205 |
93 | NC_017552 | AACGAA | 2 | 12 | 205870 | 205881 | 66.67 % | 0 % | 16.67 % | 16.67 % | 386076206 |
94 | NC_017552 | ATTTTT | 2 | 12 | 209048 | 209059 | 16.67 % | 83.33 % | 0 % | 0 % | 386076210 |
95 | NC_017552 | ATTCTG | 2 | 12 | 209904 | 209915 | 16.67 % | 50 % | 16.67 % | 16.67 % | 386076211 |
96 | NC_017552 | AATCCA | 2 | 12 | 210949 | 210960 | 50 % | 16.67 % | 0 % | 33.33 % | 386076211 |
97 | NC_017552 | TTTCAG | 2 | 12 | 218134 | 218145 | 16.67 % | 50 % | 16.67 % | 16.67 % | 386076217 |
98 | NC_017552 | TATTCA | 2 | 12 | 218364 | 218375 | 33.33 % | 50 % | 0 % | 16.67 % | 386076217 |
99 | NC_017552 | AAATAC | 2 | 12 | 221775 | 221786 | 66.67 % | 16.67 % | 0 % | 16.67 % | 386076218 |
100 | NC_017552 | GTATTT | 2 | 12 | 224527 | 224538 | 16.67 % | 66.67 % | 16.67 % | 0 % | 386076220 |
101 | NC_017552 | ATCAAT | 2 | 12 | 232921 | 232932 | 50 % | 33.33 % | 0 % | 16.67 % | 386076225 |
102 | NC_017552 | ACCACT | 2 | 12 | 234627 | 234638 | 33.33 % | 16.67 % | 0 % | 50 % | 386076227 |
103 | NC_017552 | TGTTTC | 2 | 12 | 235656 | 235667 | 0 % | 66.67 % | 16.67 % | 16.67 % | 386076227 |
104 | NC_017552 | GATTTT | 2 | 12 | 237429 | 237440 | 16.67 % | 66.67 % | 16.67 % | 0 % | 386076228 |
105 | NC_017552 | AAATTC | 2 | 12 | 238447 | 238458 | 50 % | 33.33 % | 0 % | 16.67 % | 386076228 |
106 | NC_017552 | TGGAAT | 2 | 12 | 238517 | 238528 | 33.33 % | 33.33 % | 33.33 % | 0 % | 386076228 |
107 | NC_017552 | GTAGAA | 2 | 12 | 243101 | 243112 | 50 % | 16.67 % | 33.33 % | 0 % | 386076232 |
108 | NC_017552 | TAGAAA | 2 | 12 | 245916 | 245927 | 66.67 % | 16.67 % | 16.67 % | 0 % | 386076234 |
109 | NC_017552 | TCCAAA | 2 | 12 | 248539 | 248550 | 50 % | 16.67 % | 0 % | 33.33 % | 386076236 |
110 | NC_017552 | TGGCTT | 2 | 12 | 258194 | 258205 | 0 % | 50 % | 33.33 % | 16.67 % | 386076242 |
111 | NC_017552 | TCCAAC | 2 | 12 | 258678 | 258689 | 33.33 % | 16.67 % | 0 % | 50 % | 386076242 |
112 | NC_017552 | AAGGAT | 2 | 12 | 259007 | 259018 | 50 % | 16.67 % | 33.33 % | 0 % | 386076242 |
113 | NC_017552 | CGATTT | 2 | 12 | 260644 | 260655 | 16.67 % | 50 % | 16.67 % | 16.67 % | 386076244 |
114 | NC_017552 | TATAAA | 2 | 12 | 260843 | 260854 | 66.67 % | 33.33 % | 0 % | 0 % | 386076244 |
115 | NC_017552 | TTTTAG | 2 | 12 | 267030 | 267041 | 16.67 % | 66.67 % | 16.67 % | 0 % | 386076248 |
116 | NC_017552 | GATTGA | 2 | 12 | 267873 | 267884 | 33.33 % | 33.33 % | 33.33 % | 0 % | 386076249 |
117 | NC_017552 | TCAAAA | 2 | 12 | 270106 | 270117 | 66.67 % | 16.67 % | 0 % | 16.67 % | 386076252 |
118 | NC_017552 | CGATGA | 2 | 12 | 272599 | 272610 | 33.33 % | 16.67 % | 33.33 % | 16.67 % | 386076254 |
119 | NC_017552 | AGATTA | 2 | 12 | 277495 | 277506 | 50 % | 33.33 % | 16.67 % | 0 % | 386076257 |
120 | NC_017552 | GAAAAA | 2 | 12 | 278614 | 278625 | 83.33 % | 0 % | 16.67 % | 0 % | 386076259 |
121 | NC_017552 | AATTTT | 2 | 12 | 281483 | 281494 | 33.33 % | 66.67 % | 0 % | 0 % | 386076261 |
122 | NC_017552 | ATCAAT | 2 | 12 | 282224 | 282235 | 50 % | 33.33 % | 0 % | 16.67 % | 386076262 |
123 | NC_017552 | CACAAA | 2 | 12 | 284423 | 284434 | 66.67 % | 0 % | 0 % | 33.33 % | 386076264 |
124 | NC_017552 | TTGGAA | 2 | 12 | 287566 | 287577 | 33.33 % | 33.33 % | 33.33 % | 0 % | 386076266 |
125 | NC_017552 | AAGAAA | 2 | 12 | 288793 | 288804 | 83.33 % | 0 % | 16.67 % | 0 % | 386076268 |
126 | NC_017552 | TGGAAT | 2 | 12 | 295235 | 295246 | 33.33 % | 33.33 % | 33.33 % | 0 % | 386076274 |
127 | NC_017552 | GTAGAA | 2 | 12 | 298324 | 298335 | 50 % | 16.67 % | 33.33 % | 0 % | 386076275 |
128 | NC_017552 | TTAAAA | 2 | 12 | 301037 | 301048 | 66.67 % | 33.33 % | 0 % | 0 % | 386076279 |
129 | NC_017552 | ATTTTT | 2 | 12 | 304524 | 304535 | 16.67 % | 83.33 % | 0 % | 0 % | 386076283 |
130 | NC_017552 | TGCAAA | 2 | 12 | 320361 | 320372 | 50 % | 16.67 % | 16.67 % | 16.67 % | 386076297 |
131 | NC_017552 | GTAAGA | 2 | 12 | 323698 | 323709 | 50 % | 16.67 % | 33.33 % | 0 % | 386076298 |
132 | NC_017552 | CTTTTT | 2 | 12 | 326188 | 326199 | 0 % | 83.33 % | 0 % | 16.67 % | 386076300 |
133 | NC_017552 | CAAAAG | 2 | 12 | 327308 | 327319 | 66.67 % | 0 % | 16.67 % | 16.67 % | 386076302 |
134 | NC_017552 | CAAACT | 2 | 12 | 331552 | 331563 | 50 % | 16.67 % | 0 % | 33.33 % | 386076307 |
135 | NC_017552 | ATTCCA | 2 | 12 | 335711 | 335722 | 33.33 % | 33.33 % | 0 % | 33.33 % | 386076313 |
136 | NC_017552 | TTGGAA | 2 | 12 | 336036 | 336047 | 33.33 % | 33.33 % | 33.33 % | 0 % | 386076313 |
137 | NC_017552 | TGAATA | 2 | 12 | 336840 | 336851 | 50 % | 33.33 % | 16.67 % | 0 % | 386076314 |
138 | NC_017552 | CTGAAA | 2 | 12 | 337070 | 337081 | 50 % | 16.67 % | 16.67 % | 16.67 % | 386076314 |
139 | NC_017552 | TTCCAC | 2 | 12 | 340880 | 340891 | 16.67 % | 33.33 % | 0 % | 50 % | 386076318 |
140 | NC_017552 | AAAGGT | 2 | 12 | 342032 | 342043 | 50 % | 16.67 % | 33.33 % | 0 % | 386076318 |
141 | NC_017552 | TCTTTT | 2 | 12 | 342833 | 342844 | 0 % | 83.33 % | 0 % | 16.67 % | 386076319 |
142 | NC_017552 | TTAGAA | 2 | 12 | 345065 | 345076 | 50 % | 33.33 % | 16.67 % | 0 % | 386076320 |
143 | NC_017552 | TAAAAT | 2 | 12 | 345864 | 345875 | 66.67 % | 33.33 % | 0 % | 0 % | 386076321 |
144 | NC_017552 | TAAAAT | 2 | 12 | 346951 | 346962 | 66.67 % | 33.33 % | 0 % | 0 % | 386076321 |
145 | NC_017552 | AATTTC | 2 | 12 | 354999 | 355010 | 33.33 % | 50 % | 0 % | 16.67 % | 386076327 |
146 | NC_017552 | CCAGAA | 2 | 12 | 355525 | 355536 | 50 % | 0 % | 16.67 % | 33.33 % | 386076327 |
147 | NC_017552 | CGAAGA | 2 | 12 | 355653 | 355664 | 50 % | 0 % | 33.33 % | 16.67 % | 386076327 |
148 | NC_017552 | ATATAA | 2 | 12 | 358876 | 358887 | 66.67 % | 33.33 % | 0 % | 0 % | 386076330 |
149 | NC_017552 | AACAAA | 2 | 12 | 359057 | 359068 | 83.33 % | 0 % | 0 % | 16.67 % | 386076330 |