Penta-nucleotide Coding Repeats of Lactobacillus casei BD-II plasmid pBD-II
Total Repeats: 22
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017476 | ACGTG | 2 | 10 | 1482 | 1491 | 20 % | 20 % | 40 % | 20 % | 385824842 |
2 | NC_017476 | CTTTG | 2 | 10 | 3387 | 3396 | 0 % | 60 % | 20 % | 20 % | 385824843 |
3 | NC_017476 | TAGTT | 2 | 10 | 3430 | 3439 | 20 % | 60 % | 20 % | 0 % | 385824843 |
4 | NC_017476 | TGGAT | 2 | 10 | 5569 | 5578 | 20 % | 40 % | 40 % | 0 % | 385824847 |
5 | NC_017476 | TCAGC | 2 | 10 | 6681 | 6690 | 20 % | 20 % | 20 % | 40 % | 385824848 |
6 | NC_017476 | TTGGC | 2 | 10 | 6731 | 6740 | 0 % | 40 % | 40 % | 20 % | 385824848 |
7 | NC_017476 | TGGTT | 2 | 10 | 9484 | 9493 | 0 % | 60 % | 40 % | 0 % | 385824851 |
8 | NC_017476 | TGACA | 2 | 10 | 9585 | 9594 | 40 % | 20 % | 20 % | 20 % | 385824851 |
9 | NC_017476 | TCATC | 2 | 10 | 12867 | 12876 | 20 % | 40 % | 0 % | 40 % | 385824852 |
10 | NC_017476 | TGTTT | 2 | 10 | 16919 | 16928 | 0 % | 80 % | 20 % | 0 % | 385824856 |
11 | NC_017476 | GAAAG | 2 | 10 | 18324 | 18333 | 60 % | 0 % | 40 % | 0 % | 385824857 |
12 | NC_017476 | TGGGA | 2 | 10 | 23158 | 23167 | 20 % | 20 % | 60 % | 0 % | 385824866 |
13 | NC_017476 | CAGTA | 2 | 10 | 25356 | 25365 | 40 % | 20 % | 20 % | 20 % | 385824869 |
14 | NC_017476 | ATTCA | 2 | 10 | 40524 | 40533 | 40 % | 40 % | 0 % | 20 % | 385824886 |
15 | NC_017476 | TGGCC | 2 | 10 | 40858 | 40867 | 0 % | 20 % | 40 % | 40 % | 385824887 |
16 | NC_017476 | TGTTT | 2 | 10 | 40957 | 40966 | 0 % | 80 % | 20 % | 0 % | 385824887 |
17 | NC_017476 | ACCTT | 2 | 10 | 42588 | 42597 | 20 % | 40 % | 0 % | 40 % | 385824888 |
18 | NC_017476 | ATCCA | 2 | 10 | 50163 | 50172 | 40 % | 20 % | 0 % | 40 % | 385824894 |
19 | NC_017476 | CAAAG | 2 | 10 | 50288 | 50297 | 60 % | 0 % | 20 % | 20 % | 385824894 |
20 | NC_017476 | CTACC | 2 | 10 | 51143 | 51152 | 20 % | 20 % | 0 % | 60 % | 385824896 |
21 | NC_017476 | CGTCA | 2 | 10 | 53461 | 53470 | 20 % | 20 % | 20 % | 40 % | 385824898 |
22 | NC_017476 | AAAAG | 2 | 10 | 56036 | 56045 | 80 % | 0 % | 20 % | 0 % | 385824903 |