Penta-nucleotide Coding Repeats of Lactobacillus casei LC2W plasmid pLC2W
Total Repeats: 15
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017475 | CAAAT | 2 | 10 | 3244 | 3253 | 60 % | 20 % | 0 % | 20 % | 385821662 |
2 | NC_017475 | CCATG | 2 | 10 | 4051 | 4060 | 20 % | 20 % | 20 % | 40 % | 385821662 |
3 | NC_017475 | GAAGT | 2 | 10 | 5165 | 5174 | 40 % | 20 % | 40 % | 0 % | 385821663 |
4 | NC_017475 | TAAAT | 2 | 10 | 11509 | 11518 | 60 % | 40 % | 0 % | 0 % | 385821672 |
5 | NC_017475 | GATTG | 2 | 10 | 14027 | 14036 | 20 % | 40 % | 40 % | 0 % | 385821672 |
6 | NC_017475 | TACTG | 2 | 10 | 18887 | 18896 | 20 % | 40 % | 20 % | 20 % | 385821677 |
7 | NC_017475 | CTTTT | 2 | 10 | 20269 | 20278 | 0 % | 80 % | 0 % | 20 % | 385821680 |
8 | NC_017475 | CATCA | 2 | 10 | 22677 | 22686 | 40 % | 20 % | 0 % | 40 % | 385821685 |
9 | NC_017475 | TGACG | 2 | 10 | 22844 | 22853 | 20 % | 20 % | 40 % | 20 % | 385821685 |
10 | NC_017475 | CAATG | 2 | 10 | 24999 | 25008 | 40 % | 20 % | 20 % | 20 % | 385821687 |
11 | NC_017475 | CTTTG | 2 | 10 | 26017 | 26026 | 0 % | 60 % | 20 % | 20 % | 385821689 |
12 | NC_017475 | TGGAT | 2 | 10 | 26142 | 26151 | 20 % | 40 % | 40 % | 0 % | 385821689 |
13 | NC_017475 | AAGGT | 2 | 10 | 33717 | 33726 | 40 % | 20 % | 40 % | 0 % | 385821695 |
14 | NC_017475 | GGCCA | 2 | 10 | 35447 | 35456 | 20 % | 0 % | 40 % | 40 % | 385821696 |
15 | NC_017475 | TGAAT | 2 | 10 | 35781 | 35790 | 40 % | 40 % | 20 % | 0 % | 385821697 |