Tetra-nucleotide Coding Repeats of Lactobacillus casei LC2W plasmid pLC2W
Total Repeats: 77
S.No. | Genome ID | Motif | Iterations | Length | Start | End | A% | T% | G% | C% | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_017475 | TGGT | 2 | 8 | 293 | 300 | 0 % | 50 % | 50 % | 0 % | 385821657 |
2 | NC_017475 | TTGT | 2 | 8 | 1480 | 1487 | 0 % | 75 % | 25 % | 0 % | 385821660 |
3 | NC_017475 | CAGG | 2 | 8 | 2283 | 2290 | 25 % | 0 % | 50 % | 25 % | 385821661 |
4 | NC_017475 | CGAC | 2 | 8 | 2600 | 2607 | 25 % | 0 % | 25 % | 50 % | 385821661 |
5 | NC_017475 | TGAG | 2 | 8 | 2740 | 2747 | 25 % | 25 % | 50 % | 0 % | 385821661 |
6 | NC_017475 | ACGA | 2 | 8 | 2749 | 2756 | 50 % | 0 % | 25 % | 25 % | 385821661 |
7 | NC_017475 | TGAC | 2 | 8 | 3211 | 3218 | 25 % | 25 % | 25 % | 25 % | 385821662 |
8 | NC_017475 | CAGG | 2 | 8 | 3741 | 3748 | 25 % | 0 % | 50 % | 25 % | 385821662 |
9 | NC_017475 | CATT | 2 | 8 | 4165 | 4172 | 25 % | 50 % | 0 % | 25 % | 385821662 |
10 | NC_017475 | CAAA | 2 | 8 | 4370 | 4377 | 75 % | 0 % | 0 % | 25 % | 385821662 |
11 | NC_017475 | AAAC | 2 | 8 | 4442 | 4449 | 75 % | 0 % | 0 % | 25 % | 385821662 |
12 | NC_017475 | AAAG | 2 | 8 | 5855 | 5862 | 75 % | 0 % | 25 % | 0 % | 385821663 |
13 | NC_017475 | GATT | 2 | 8 | 5911 | 5918 | 25 % | 50 % | 25 % | 0 % | 385821663 |
14 | NC_017475 | CAAA | 2 | 8 | 6082 | 6089 | 75 % | 0 % | 0 % | 25 % | 385821663 |
15 | NC_017475 | TGAG | 2 | 8 | 6111 | 6118 | 25 % | 25 % | 50 % | 0 % | 385821663 |
16 | NC_017475 | TGGT | 2 | 8 | 6213 | 6220 | 0 % | 50 % | 50 % | 0 % | 385821664 |
17 | NC_017475 | TGCA | 2 | 8 | 6264 | 6271 | 25 % | 25 % | 25 % | 25 % | 385821664 |
18 | NC_017475 | CAAC | 2 | 8 | 6352 | 6359 | 50 % | 0 % | 0 % | 50 % | 385821664 |
19 | NC_017475 | AATG | 2 | 8 | 8195 | 8202 | 50 % | 25 % | 25 % | 0 % | 385821669 |
20 | NC_017475 | GTCC | 2 | 8 | 8801 | 8808 | 0 % | 25 % | 25 % | 50 % | 385821670 |
21 | NC_017475 | GATA | 2 | 8 | 8923 | 8930 | 50 % | 25 % | 25 % | 0 % | 385821670 |
22 | NC_017475 | GTTG | 2 | 8 | 9279 | 9286 | 0 % | 50 % | 50 % | 0 % | 385821670 |
23 | NC_017475 | TCAA | 2 | 8 | 9397 | 9404 | 50 % | 25 % | 0 % | 25 % | 385821670 |
24 | NC_017475 | AATT | 2 | 8 | 9687 | 9694 | 50 % | 50 % | 0 % | 0 % | 385821670 |
25 | NC_017475 | ATCA | 2 | 8 | 10593 | 10600 | 50 % | 25 % | 0 % | 25 % | 385821671 |
26 | NC_017475 | GAAT | 2 | 8 | 10630 | 10637 | 50 % | 25 % | 25 % | 0 % | 385821671 |
27 | NC_017475 | ATAA | 2 | 8 | 10642 | 10649 | 75 % | 25 % | 0 % | 0 % | 385821671 |
28 | NC_017475 | CAAT | 2 | 8 | 11440 | 11447 | 50 % | 25 % | 0 % | 25 % | 385821672 |
29 | NC_017475 | TTTG | 2 | 8 | 12233 | 12240 | 0 % | 75 % | 25 % | 0 % | 385821672 |
30 | NC_017475 | GTCA | 2 | 8 | 12955 | 12962 | 25 % | 25 % | 25 % | 25 % | 385821672 |
31 | NC_017475 | AATT | 2 | 8 | 13393 | 13400 | 50 % | 50 % | 0 % | 0 % | 385821672 |
32 | NC_017475 | AATT | 2 | 8 | 14016 | 14023 | 50 % | 50 % | 0 % | 0 % | 385821672 |
33 | NC_017475 | ATCT | 2 | 8 | 14965 | 14972 | 25 % | 50 % | 0 % | 25 % | 385821673 |
34 | NC_017475 | CTAT | 2 | 8 | 15268 | 15275 | 25 % | 50 % | 0 % | 25 % | 385821673 |
35 | NC_017475 | GGTT | 2 | 8 | 15284 | 15291 | 0 % | 50 % | 50 % | 0 % | 385821673 |
36 | NC_017475 | CTTA | 2 | 8 | 15481 | 15488 | 25 % | 50 % | 0 % | 25 % | 385821673 |
37 | NC_017475 | TCAG | 2 | 8 | 16093 | 16100 | 25 % | 25 % | 25 % | 25 % | 385821673 |
38 | NC_017475 | TAGC | 2 | 8 | 16123 | 16130 | 25 % | 25 % | 25 % | 25 % | 385821673 |
39 | NC_017475 | AAAT | 2 | 8 | 17809 | 17816 | 75 % | 25 % | 0 % | 0 % | 385821676 |
40 | NC_017475 | AAGT | 2 | 8 | 18615 | 18622 | 50 % | 25 % | 25 % | 0 % | 385821677 |
41 | NC_017475 | TTGA | 2 | 8 | 18829 | 18836 | 25 % | 50 % | 25 % | 0 % | 385821677 |
42 | NC_017475 | TTGA | 2 | 8 | 19510 | 19517 | 25 % | 50 % | 25 % | 0 % | 385821678 |
43 | NC_017475 | ACGC | 2 | 8 | 20627 | 20634 | 25 % | 0 % | 25 % | 50 % | 385821681 |
44 | NC_017475 | TGAA | 2 | 8 | 20938 | 20945 | 50 % | 25 % | 25 % | 0 % | 385821683 |
45 | NC_017475 | TGAT | 2 | 8 | 21831 | 21838 | 25 % | 50 % | 25 % | 0 % | 385821684 |
46 | NC_017475 | TCTT | 2 | 8 | 22414 | 22421 | 0 % | 75 % | 0 % | 25 % | 385821685 |
47 | NC_017475 | TTTG | 2 | 8 | 22655 | 22662 | 0 % | 75 % | 25 % | 0 % | 385821685 |
48 | NC_017475 | GTCG | 2 | 8 | 22780 | 22787 | 0 % | 25 % | 50 % | 25 % | 385821685 |
49 | NC_017475 | TGTT | 2 | 8 | 22896 | 22903 | 0 % | 75 % | 25 % | 0 % | 385821685 |
50 | NC_017475 | GCGA | 2 | 8 | 23403 | 23410 | 25 % | 0 % | 50 % | 25 % | 385821686 |
51 | NC_017475 | TGTA | 2 | 8 | 24084 | 24091 | 25 % | 50 % | 25 % | 0 % | 385821686 |
52 | NC_017475 | GAAA | 2 | 8 | 24120 | 24127 | 75 % | 0 % | 25 % | 0 % | 385821686 |
53 | NC_017475 | ATGT | 2 | 8 | 25143 | 25150 | 25 % | 50 % | 25 % | 0 % | 385821687 |
54 | NC_017475 | AAAG | 2 | 8 | 25446 | 25453 | 75 % | 0 % | 25 % | 0 % | 385821688 |
55 | NC_017475 | AATG | 2 | 8 | 25669 | 25676 | 50 % | 25 % | 25 % | 0 % | 385821688 |
56 | NC_017475 | TTGA | 2 | 8 | 25691 | 25698 | 25 % | 50 % | 25 % | 0 % | 385821688 |
57 | NC_017475 | GGCA | 2 | 8 | 25728 | 25735 | 25 % | 0 % | 50 % | 25 % | 385821688 |
58 | NC_017475 | GAAA | 2 | 8 | 25952 | 25959 | 75 % | 0 % | 25 % | 0 % | 385821689 |
59 | NC_017475 | ACCA | 2 | 8 | 26189 | 26196 | 50 % | 0 % | 0 % | 50 % | 385821690 |
60 | NC_017475 | GCTT | 2 | 8 | 26354 | 26361 | 0 % | 50 % | 25 % | 25 % | 385821690 |
61 | NC_017475 | AGCG | 2 | 8 | 26431 | 26438 | 25 % | 0 % | 50 % | 25 % | 385821690 |
62 | NC_017475 | CTTT | 2 | 8 | 27032 | 27039 | 0 % | 75 % | 0 % | 25 % | 385821690 |
63 | NC_017475 | TAAA | 2 | 8 | 27556 | 27563 | 75 % | 25 % | 0 % | 0 % | 385821691 |
64 | NC_017475 | GTCA | 2 | 8 | 28199 | 28206 | 25 % | 25 % | 25 % | 25 % | 385821692 |
65 | NC_017475 | CTTT | 2 | 8 | 29338 | 29345 | 0 % | 75 % | 0 % | 25 % | 385821693 |
66 | NC_017475 | CTGA | 2 | 8 | 30692 | 30699 | 25 % | 25 % | 25 % | 25 % | 385821695 |
67 | NC_017475 | TCCA | 2 | 8 | 31254 | 31261 | 25 % | 25 % | 0 % | 50 % | 385821695 |
68 | NC_017475 | TAAC | 2 | 8 | 31668 | 31675 | 50 % | 25 % | 0 % | 25 % | 385821695 |
69 | NC_017475 | ACTA | 2 | 8 | 32119 | 32126 | 50 % | 25 % | 0 % | 25 % | 385821695 |
70 | NC_017475 | AGCA | 2 | 8 | 32321 | 32328 | 50 % | 0 % | 25 % | 25 % | 385821695 |
71 | NC_017475 | AATC | 2 | 8 | 33652 | 33659 | 50 % | 25 % | 0 % | 25 % | 385821695 |
72 | NC_017475 | AAGA | 2 | 8 | 33791 | 33798 | 75 % | 0 % | 25 % | 0 % | 385821695 |
73 | NC_017475 | AGAC | 2 | 8 | 34578 | 34585 | 50 % | 0 % | 25 % | 25 % | 385821695 |
74 | NC_017475 | CAAA | 2 | 8 | 35347 | 35354 | 75 % | 0 % | 0 % | 25 % | 385821696 |
75 | NC_017475 | AATC | 2 | 8 | 35459 | 35466 | 50 % | 25 % | 0 % | 25 % | 385821696 |
76 | NC_017475 | GATG | 2 | 8 | 36473 | 36480 | 25 % | 25 % | 50 % | 0 % | 385821698 |
77 | NC_017475 | AACC | 2 | 8 | 37541 | 37548 | 50 % | 0 % | 0 % | 50 % | 385821699 |