MICAS: Microsatellite Analysis Server 3.0

Tri-nucleotide Non-Coding Repeats of Borrelia burgdorferi N40 plasmid N40_lp28-2

Total Repeats: 76

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_017419	ATT	2	6	4	9	33.33 %	66.67 %	0 %	0 %	Non-Coding
2	NC_017419	CAT	2	6	43	48	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
3	NC_017419	CTT	2	6	157	162	0 %	66.67 %	0 %	33.33 %	Non-Coding
4	NC_017419	ATT	2	6	2225	2230	33.33 %	66.67 %	0 %	0 %	Non-Coding
5	NC_017419	AGG	2	6	2231	2236	33.33 %	0 %	66.67 %	0 %	Non-Coding
6	NC_017419	ATT	2	6	2787	2792	33.33 %	66.67 %	0 %	0 %	Non-Coding
7	NC_017419	CTT	2	6	2823	2828	0 %	66.67 %	0 %	33.33 %	Non-Coding
8	NC_017419	ATT	2	6	2875	2880	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_017419	TAC	2	6	2890	2895	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
10	NC_017419	TAT	2	6	2904	2909	33.33 %	66.67 %	0 %	0 %	Non-Coding
11	NC_017419	ACT	2	6	2948	2953	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
12	NC_017419	CTT	2	6	2982	2987	0 %	66.67 %	0 %	33.33 %	Non-Coding
13	NC_017419	ATA	2	6	7534	7539	66.67 %	33.33 %	0 %	0 %	Non-Coding
14	NC_017419	GCC	2	6	11003	11008	0 %	0 %	33.33 %	66.67 %	Non-Coding
15	NC_017419	CCT	2	6	14485	14490	0 %	33.33 %	0 %	66.67 %	Non-Coding
16	NC_017419	TAA	2	6	15076	15081	66.67 %	33.33 %	0 %	0 %	Non-Coding
17	NC_017419	TGT	2	6	15205	15210	0 %	66.67 %	33.33 %	0 %	Non-Coding
18	NC_017419	TCT	2	6	15423	15428	0 %	66.67 %	0 %	33.33 %	Non-Coding
19	NC_017419	CTT	2	6	15546	15551	0 %	66.67 %	0 %	33.33 %	Non-Coding
20	NC_017419	CCT	2	6	15576	15581	0 %	33.33 %	0 %	66.67 %	Non-Coding
21	NC_017419	TCA	2	6	15715	15720	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
22	NC_017419	ATC	2	6	16005	16010	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
23	NC_017419	ATC	2	6	16024	16029	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
24	NC_017419	GTT	2	6	16139	16144	0 %	66.67 %	33.33 %	0 %	Non-Coding
25	NC_017419	ATA	2	6	16185	16190	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_017419	CAA	2	6	16288	16293	66.67 %	0 %	0 %	33.33 %	Non-Coding
27	NC_017419	ATC	2	6	16349	16354	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
28	NC_017419	ACT	2	6	16365	16370	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
29	NC_017419	ATT	2	6	16436	16441	33.33 %	66.67 %	0 %	0 %	Non-Coding
30	NC_017419	AAT	2	6	16446	16451	66.67 %	33.33 %	0 %	0 %	Non-Coding
31	NC_017419	CAT	2	6	16462	16467	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
32	NC_017419	CCT	2	6	19749	19754	0 %	33.33 %	0 %	66.67 %	Non-Coding
33	NC_017419	GTT	2	6	20038	20043	0 %	66.67 %	33.33 %	0 %	Non-Coding
34	NC_017419	AAG	2	6	20048	20053	66.67 %	0 %	33.33 %	0 %	Non-Coding
35	NC_017419	ATT	2	6	20063	20068	33.33 %	66.67 %	0 %	0 %	Non-Coding
36	NC_017419	TGA	2	6	20293	20298	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
37	NC_017419	TCT	2	6	20306	20311	0 %	66.67 %	0 %	33.33 %	Non-Coding
38	NC_017419	ATG	2	6	20322	20327	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
39	NC_017419	TTC	2	6	20386	20391	0 %	66.67 %	0 %	33.33 %	Non-Coding
40	NC_017419	TCC	2	6	20404	20409	0 %	33.33 %	0 %	66.67 %	Non-Coding
41	NC_017419	GTT	2	6	20433	20438	0 %	66.67 %	33.33 %	0 %	Non-Coding
42	NC_017419	CTT	2	6	20507	20512	0 %	66.67 %	0 %	33.33 %	Non-Coding
43	NC_017419	AGT	2	6	20588	20593	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
44	NC_017419	CAT	2	6	20694	20699	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
45	NC_017419	AAC	2	6	20716	20721	66.67 %	0 %	0 %	33.33 %	Non-Coding
46	NC_017419	TTG	2	6	21034	21039	0 %	66.67 %	33.33 %	0 %	Non-Coding
47	NC_017419	ATC	2	6	21065	21070	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
48	NC_017419	TTG	2	6	21193	21198	0 %	66.67 %	33.33 %	0 %	Non-Coding
49	NC_017419	GGA	2	6	21227	21232	33.33 %	0 %	66.67 %	0 %	Non-Coding
50	NC_017419	ATT	2	6	21270	21275	33.33 %	66.67 %	0 %	0 %	Non-Coding
51	NC_017419	GAA	2	6	21427	21432	66.67 %	0 %	33.33 %	0 %	Non-Coding
52	NC_017419	GTT	2	6	21490	21495	0 %	66.67 %	33.33 %	0 %	Non-Coding
53	NC_017419	CTT	3	9	21508	21516	0 %	66.67 %	0 %	33.33 %	Non-Coding
54	NC_017419	TAA	2	6	21631	21636	66.67 %	33.33 %	0 %	0 %	Non-Coding
55	NC_017419	ACA	2	6	21709	21714	66.67 %	0 %	0 %	33.33 %	Non-Coding
56	NC_017419	TCT	2	6	21738	21743	0 %	66.67 %	0 %	33.33 %	Non-Coding
57	NC_017419	CAT	3	9	21793	21801	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
58	NC_017419	TAT	2	6	21830	21835	33.33 %	66.67 %	0 %	0 %	Non-Coding
59	NC_017419	TAG	2	6	21938	21943	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
60	NC_017419	AGT	2	6	21949	21954	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
61	NC_017419	CTG	2	6	21999	22004	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
62	NC_017419	GAA	2	6	22079	22084	66.67 %	0 %	33.33 %	0 %	Non-Coding
63	NC_017419	TTC	2	6	22100	22105	0 %	66.67 %	0 %	33.33 %	Non-Coding
64	NC_017419	CAA	2	6	22198	22203	66.67 %	0 %	0 %	33.33 %	Non-Coding
65	NC_017419	TCT	2	6	22284	22289	0 %	66.67 %	0 %	33.33 %	Non-Coding
66	NC_017419	TTC	2	6	22304	22309	0 %	66.67 %	0 %	33.33 %	Non-Coding
67	NC_017419	ATT	2	6	24344	24349	33.33 %	66.67 %	0 %	0 %	Non-Coding
68	NC_017419	AGG	2	6	26490	26495	33.33 %	0 %	66.67 %	0 %	Non-Coding
69	NC_017419	ACA	2	6	26569	26574	66.67 %	0 %	0 %	33.33 %	Non-Coding
70	NC_017419	ATT	2	6	26612	26617	33.33 %	66.67 %	0 %	0 %	Non-Coding
71	NC_017419	TGA	2	6	27169	27174	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
72	NC_017419	TAG	2	6	28097	28102	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
73	NC_017419	CAG	2	6	29464	29469	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
74	NC_017419	ATA	2	6	29472	29477	66.67 %	33.33 %	0 %	0 %	Non-Coding
75	NC_017419	AGA	2	6	29504	29509	66.67 %	0 %	33.33 %	0 %	Non-Coding
76	NC_017419	TAA	2	6	29512	29517	66.67 %	33.33 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.